Tracking perturbations in Boolean networks with spectral methods

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics

Volumn 72, Issue 2, 2005, Pages

  Kesseli, Juha ^a   Rämö, Pauli ^a   Yli Harja, Olli ^a  

^a TAMPERE UNIVERSITY OF TECHNOLOGY   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL DATA; BOOLEAN NETWORKS; ITERATIVE FORMULAS; RANDOM NETWORKS;

COMPUTATION THEORY; COMPUTER NETWORKS; FOURIER TRANSFORMS; ITERATIVE METHODS; PERTURBATION TECHNIQUES; TOPOLOGY;

BOOLEAN ALGEBRA;

EID: 27244459587     PISSN: 15393755     EISSN: 15502376     Source Type: Journal    
DOI: 10.1103/PhysRevE.72.026137     Document Type: Article

References (19)

1. S. A. Kauffman, The Origins of Order (Oxford University Press, New York, 1993).
2. M. D. Stern, Evolution (Lawrence, Kans.) EVOLAO 0014-3820 96, 10746 (1999).
3. M. Aldana, S. Coppersmith, and L. P. Kadanoff, in Perspectives and Problems in Nonlinear Science, edited by, E. Kaplan, J. E. Marsden, and, K. R. Sreenivasan, (Springer, New York, 2003), pp. 23-89.
4. B. Derrida and Y. Pomeau, Europhys. Lett. EULEEJ 0295-5075 1, 45 (1986).
5. B. Derrida and D. Stauffer, Europhys. Lett. EULEEJ 0295-5075 2, 739 (1986).
6. B. Luque and C. Blanc, Santa Fe Institute working paper 97-11-084, 1997.
7. B. K. Sawhill and S. Kauffman, Santa Fe Institute working paper 97-05-038, 1997.
8. I. Shmulevich and S. A. Kauffman, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.93.048701 93, 048701 (2004).
9. I. Shmulevich, H. Lähdesmäki, E. R. Dougherty, and W. Z. Jaakko Astola, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 10.1073/pnas.1534782100 100, 10734 (2003).
10. A. Wuensche, Santa Fe Institute working paper 98-11-101, 1998.
11. A. Moreira and L. Amaral, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.94.218702 94, 218702 (2005).
12. A. Bernasconi, Ph.D. thesis, University of Pisa, 1998.
13. R. J. Lechner, Recent Developments in Switching Theory (Academic, New York, 1971), Chap. Harmonic Analysis of Switching Functions, pp. 122-229, Electrical Science Series.
14. M. G. Karpovsky, Spectral Techniques and Fault Detection (Academic, Orlando, FL, 1985).
15. F. J. MacWilliams and N. J. Sloane, The Theory of Error-Correcting Codes (North-Holland, Amsterdam, 1977).
16. J. Kesseli, P. Rämö, and O. Yli-Harja, Physica D PDNPDT 0167-2789 206, 49 (2005).
17. J. L. Shanks, IEEE Trans. Comput. ITCOB4 0018-9340 C18, 457 (1969).
18. S. E. Harris, B. K. Sawhill, A. Wuenche, and S. Kauffman, Complexity COMPFS 1076-2787 10.1002/cplx.10022 7, 23 (2001).
19. S. A. Kauffman, C. Peterson, B. Samuelsson, and C. Troein, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 10.1073/pnas.2036429100 100, 14796 (2003).