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Volumn 138, Issue 1, 2005, Pages 490-515

Genome-based examination of chlorophyll and carotenoid biosynthesis in Chlamydomonas reinhardtii

Author keywords

[No Author keywords available]

Indexed keywords

BIOSYNTHESIS; CHLOROPHYLL; MICROORGANISMS; PROTEINS; RNA;

EID: 27244453757     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.104.056069     Document Type: Article
Times cited : (132)

References (142)
  • 3
    • 10944260280 scopus 로고    scopus 로고
    • Genomic analysis of mutants affecting xanthophyll biosynthesis and regulation of photosynthetic light harvesting in Chlamydomonas reinhardtii
    • Anwaruzzaman M, Chin BL, Li X-P, Lohr M, Martinez DA, Niyogi KK (2004) Genomic analysis of mutants affecting xanthophyll biosynthesis and regulation of photosynthetic light harvesting in Chlamydomonas reinhardtii. Photosynth Res 82: 265-276
    • (2004) Photosynth Res , vol.82 , pp. 265-276
    • Anwaruzzaman, M.1    Chin, B.L.2    Li, X.-P.3    Lohr, M.4    Martinez, D.A.5    Niyogi, K.K.6
  • 4
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome Initiative (2001) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815
    • (2001) Nature , vol.408 , pp. 796-815
  • 7
    • 0033621284 scopus 로고    scopus 로고
    • A large scale structural analysis of cDNAs in a unicellular green alga, Chlamydomonas reinhardtii. I. Generation of 3433 non-redundant expressed sequence tags
    • Asamizu E, Nakamura Y, Sato S, Fukuzawa H, Tabata S (1999) A large scale structural analysis of cDNAs in a unicellular green alga, Chlamydomonas reinhardtii. I. Generation of 3433 non-redundant expressed sequence tags. DNA Res 6: 369-373
    • (1999) DNA Res , vol.6 , pp. 369-373
    • Asamizu, E.1    Nakamura, Y.2    Sato, S.3    Fukuzawa, H.4    Tabata, S.5
  • 9
    • 0036187913 scopus 로고    scopus 로고
    • Extensive feature detection of N-terminal protein sorting signals
    • Bannai H, Tamada Y, Maruyama O, Nakai K, Miyano S (2002) Extensive feature detection of N-terminal protein sorting signals. Bioinformatics 18: 298-305
    • (2002) Bioinformatics , vol.18 , pp. 298-305
    • Bannai, H.1    Tamada, Y.2    Maruyama, O.3    Nakai, K.4    Miyano, S.5
  • 10
    • 0037392876 scopus 로고    scopus 로고
    • Zeaxanthin accumulation in the absence of a functional xanthophyll cycle protects Chlamydomonas reinhardtii from photooxidative stress
    • Baroli I, Do AD, Yamane T, Niyogi KK (2003) Zeaxanthin accumulation in the absence of a functional xanthophyll cycle protects Chlamydomonas reinhardtii from photooxidative stress. Plant Cell 15: 992-1008
    • (2003) Plant Cell , vol.15 , pp. 992-1008
    • Baroli, I.1    Do, A.D.2    Yamane, T.3    Niyogi, K.K.4
  • 11
    • 0034730981 scopus 로고    scopus 로고
    • Molecular genetics of xanthophyll-dependent photoprotection in green algae and plants
    • Baroli I, Niyogi KK (2000) Molecular genetics of xanthophyll-dependent photoprotection in green algae and plants. Philos Trans R Soc Lond B Biol Sci 355: 1385-1394
    • (2000) Philos Trans R Soc Lond B Biol Sci , vol.355 , pp. 1385-1394
    • Baroli, I.1    Niyogi, K.K.2
  • 12
    • 0032817545 scopus 로고    scopus 로고
    • Enzymes of chlorophyll biosynthesis
    • Beale SI (1999) Enzymes of chlorophyll biosynthesis. Photosynth Res 60: 43-73
    • (1999) Photosynth Res , vol.60 , pp. 43-73
    • Beale, S.I.1
  • 13
    • 0020024572 scopus 로고
    • Codon selection in yeast
    • Bennetzen JL, Hall BD (1982) Codon selection in yeast. J Biol Chem 257: 3026-3031
    • (1982) J Biol Chem , vol.257 , pp. 3026-3031
    • Bennetzen, J.L.1    Hall, B.D.2
  • 14
    • 0037073117 scopus 로고    scopus 로고
    • Regulation of carotenoid biosynthesis genes in response to light in Chlamydomonas reinhardtii
    • Bohne F, Linden H (2002) Regulation of carotenoid biosynthesis genes in response to light in Chlamydomonas reinhardtii. Biochim Biophys Acta 1579: 26-34
    • (2002) Biochim Biophys Acta , vol.1579 , pp. 26-34
    • Bohne, F.1    Linden, H.2
  • 15
    • 6444240408 scopus 로고    scopus 로고
    • Regulation of carotenoid biosynthesis in plants: Evidence for a key role of hydroxymethylbutenyl diphosphate reductase in controlling the supply of plastidial isoprenoid precursors
    • Botella-Pavia P, Besumbes O, Phillips MA, Carretero-Paulet L, Boronat A, Rodriguez-Concepcion M (2004) Regulation of carotenoid biosynthesis in plants: evidence for a key role of hydroxymethylbutenyl diphosphate reductase in controlling the supply of plastidial isoprenoid precursors. Plant J 40: 188-199
    • (2004) Plant J , vol.40 , pp. 188-199
    • Botella-Pavia, P.1    Besumbes, O.2    Phillips, M.A.3    Carretero-Paulet, L.4    Boronat, A.5    Rodriguez-Concepcion, M.6
  • 16
    • 0030162258 scopus 로고    scopus 로고
    • Members of a low-copy number gene family encoding glutamyl-tRNA reductase are differentially expressed in barley
    • Bougri O, Grimm B (1996) Members of a low-copy number gene family encoding glutamyl-tRNA reductase are differentially expressed in barley. Plant J 9: 867-878
    • (1996) Plant J , vol.9 , pp. 867-878
    • Bougri, O.1    Grimm, B.2
  • 18
    • 0029842720 scopus 로고    scopus 로고
    • Xanthophyll biosynthesis. Cloning, expression, functional reconstitution, and regulation of beta-cyclohexenyl carotenoid epoxidase from pepper (Capsicum annuum)
    • Bouvier F, d'Harlingue A, Hugueney P, Marin E, Marion-Poll A, Camara B (1996) Xanthophyll biosynthesis. Cloning, expression, functional reconstitution, and regulation of beta-cyclohexenyl carotenoid epoxidase from pepper (Capsicum annuum). J Biol Chem 271: 28861-28867
    • (1996) J Biol Chem , vol.271 , pp. 28861-28867
    • Bouvier, F.1    D'Harlingue, A.2    Hugueney, P.3    Marin, E.4    Marion-Poll, A.5    Camara, B.6
  • 19
    • 0030199805 scopus 로고    scopus 로고
    • Expression in Escherichia coli and properties of the carotene ketolase from Haematococcus pluvialis
    • Breitenbach J, Misawa N, Kajiwara S, Sandmann G (1996) Expression in Escherichia coli and properties of the carotene ketolase from Haematococcus pluvialis. FEMS Microbiol Lett 140: 241-246
    • (1996) FEMS Microbiol Lett , vol.140 , pp. 241-246
    • Breitenbach, J.1    Misawa, N.2    Kajiwara, S.3    Sandmann, G.4
  • 20
    • 0032546960 scopus 로고    scopus 로고
    • Xanthophyll cycle enzymes are members of the lipocalin family, the first identified from plants
    • Bugos RC, Hieber AD, Yamamoto HY (1998) Xanthophyll cycle enzymes are members of the lipocalin family, the first identified from plants. J Biol Chem 273: 15321-15324
    • (1998) J Biol Chem , vol.273 , pp. 15321-15324
    • Bugos, R.C.1    Hieber, A.D.2    Yamamoto, H.Y.3
  • 22
    • 0344653653 scopus 로고    scopus 로고
    • Codon usage and gene function are related in sequences of Arabidopsis thaliana
    • Chiapello H, Lisacek F, Caboche M, Henaut A (1998) Codon usage and gene function are related in sequences of Arabidopsis thaliana. Gene 209: GC1-GC38
    • (1998) Gene , vol.209
    • Chiapello, H.1    Lisacek, F.2    Caboche, M.3    Henaut, A.4
  • 23
    • 0038338448 scopus 로고    scopus 로고
    • Green or red: What stops the traffic in the tetrapyrrole pathway?
    • Cornah JE, Terry MJ, Smith AG (2003) Green or red: What stops the traffic in the tetrapyrrole pathway? Trends Plant Sci 8: 224-230
    • (2003) Trends Plant Sci , vol.8 , pp. 224-230
    • Cornah, J.E.1    Terry, M.J.2    Smith, A.G.3
  • 24
    • 0030759333 scopus 로고    scopus 로고
    • Prediction of transmembrane alpha-helices in prokaryotic membrane proteins: The dense alignment surface method
    • Cserzo M, Wallin E, Simon I, von Heijne G, Elofsson A (1997) Prediction of transmembrane alpha-helices in prokaryotic membrane proteins: the dense alignment surface method. Protein Eng 10: 673-676
    • (1997) Protein Eng , vol.10 , pp. 673-676
    • Cserzo, M.1    Wallin, E.2    Simon, I.3    Von Heijne, G.4    Elofsson, A.5
  • 26
    • 0033963451 scopus 로고    scopus 로고
    • Identification of multi-gene families encoding isopentenyl diphosphate isomerase in plants by heterologous complementation in Escherichia coli
    • Cunningham FX Jr, Gantt E (2000) Identification of multi-gene families encoding isopentenyl diphosphate isomerase in plants by heterologous complementation in Escherichia coli. Plant Cell Physiol 41: 119-123
    • (2000) Plant Cell Physiol , vol.41 , pp. 119-123
    • Cunningham Jr., F.X.1    Gantt, E.2
  • 27
    • 10344250388 scopus 로고    scopus 로고
    • Functional analysis of the beta and epsilon lycopene cyclase enzymes of Arabidopsis reveals a mechanism for control of cyclic carotenoid formation
    • Cunningham FX Jr, Pogson B, Sun Z, McDonald KA, DellaPenna D, Gantt E (1996) Functional analysis of the beta and epsilon lycopene cyclase enzymes of Arabidopsis reveals a mechanism for control of cyclic carotenoid formation. Plant Cell 8: 1613-1626
    • (1996) Plant Cell , vol.8 , pp. 1613-1626
    • Cunningham Jr., F.X.1    Pogson, B.2    Sun, Z.3    McDonald, K.A.4    DellaPenna, D.5    Gantt, E.6
  • 28
    • 0025187594 scopus 로고
    • Carotenoids and photoprotection in plants: A role for the xanthophyll zeaxanthin
    • Demmig-Adams B (1990) Carotenoids and photoprotection in plants: a role for the xanthophyll zeaxanthin. Biochim Biophys Acta 1020: 1-24
    • (1990) Biochim Biophys Acta , vol.1020 , pp. 1-24
    • Demmig-Adams, B.1
  • 29
    • 0030095112 scopus 로고    scopus 로고
    • In vivo functions of carotenoids in higher plants
    • Demmig-Adams B, Gilmore AM, Adams WW III (1996) In vivo functions of carotenoids in higher plants. FASEB J 10: 403-412
    • (1996) FASEB J , vol.10 , pp. 403-412
    • Demmig-Adams, B.1    Gilmore, A.M.2    Adams III, W.W.3
  • 30
    • 0344237338 scopus 로고    scopus 로고
    • Unexpected correlations between gene expression and codon usage bias from microarray data for the whole Escherichia coli K-12 genome
    • dos Reis M, Wernisch L, Savva R (2003) Unexpected correlations between gene expression and codon usage bias from microarray data for the whole Escherichia coli K-12 genome. Nucleic Acids Res 31: 6976-6985
    • (2003) Nucleic Acids Res , vol.31 , pp. 6976-6985
    • Dos Reis, M.1    Wernisch, L.2    Savva, R.3
  • 31
    • 2942557179 scopus 로고    scopus 로고
    • Synthesis of chlorophyll b: Localization of chlorophyllide a oxygenase and discovery of a stable radical in the catalytic subunit
    • Eggink LL, LoBrutto R, Brune DC, Brusslan J, Yamasato A, Tanaka A, Hoober JK (2004) Synthesis of chlorophyll b: localization of chlorophyllide a oxygenase and discovery of a stable radical in the catalytic subunit. BMC Plant Biol 4: 5
    • (2004) BMC Plant Biol , vol.4 , pp. 5
    • Eggink, L.L.1    LoBrutto, R.2    Brune, D.C.3    Brusslan, J.4    Yamasato, A.5    Tanaka, A.6    Hoober, J.K.7
  • 32
    • 1442301640 scopus 로고    scopus 로고
    • A genome's-eye view of the light-harvesting polypeptides of Chlamydomonas reinhardtii
    • Elrad D, Grossman AR (2004) A genome's-eye view of the light-harvesting polypeptides of Chlamydomonas reinhardtii. Curr Genet 45: 61-75
    • (2004) Curr Genet , vol.45 , pp. 61-75
    • Elrad, D.1    Grossman, A.R.2
  • 33
    • 0034697980 scopus 로고    scopus 로고
    • Predicting subcellular localization of proteins based on their N-terminal amino acid sequence
    • Emanuelsson O, Nielsen H, Brunak S, von Heijne G (2000) Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. J Mol Biol 300: 1005-1016
    • (2000) J Mol Biol , vol.300 , pp. 1005-1016
    • Emanuelsson, O.1    Nielsen, H.2    Brunak, S.3    Von Heijne, G.4
  • 34
    • 0032935861 scopus 로고    scopus 로고
    • ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites
    • Emanuelsson O, Nielsen H, von Heijne G (1999) ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites. Protein Sci 8: 978-984
    • (1999) Protein Sci , vol.8 , pp. 978-984
    • Emanuelsson, O.1    Nielsen, H.2    Von Heijne, G.3
  • 35
    • 0033621182 scopus 로고    scopus 로고
    • The AtCAO gene, encoding chlorophyll a oxygenase, is required for chlorophyll b synthesis in Arabidopsis thaliana
    • USA
    • Espineda CE, Linford AS, Devine D, Brusslan JA (1999) The AtCAO gene, encoding chlorophyll a oxygenase, is required for chlorophyll b synthesis in Arabidopsis thaliana. Proc Natl Acad Sci USA 96: 10507-10511
    • (1999) Proc Natl Acad Sci , vol.96 , pp. 10507-10511
    • Espineda, C.E.1    Linford, A.S.2    Devine, D.3    Brusslan, J.A.4
  • 36
    • 0000122573 scopus 로고
    • PHYLIP - Phylogeny Inference Package (Version 3.2)
    • Felsenstein J (1989) PHYLIP - Phylogeny Inference Package (Version 3.2). Cladistics 5: 164-166
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 37
    • 0035861976 scopus 로고    scopus 로고
    • Functional architecture of the major light-harvesting complex from higher plants
    • Formaggio E, Cinque G, Bassi R (2001) Functional architecture of the major light-harvesting complex from higher plants. J Mol Biol 314: 1157-1166
    • (2001) J Mol Biol , vol.314 , pp. 1157-1166
    • Formaggio, E.1    Cinque, G.2    Bassi, R.3
  • 38
    • 3042812428 scopus 로고    scopus 로고
    • Redox functions of carotenoids in photosynthesis
    • Frank HA, Brudvig GW (2004) Redox functions of carotenoids in photosynthesis. Biochemistry 43: 8607-8615
    • (2004) Biochemistry , vol.43 , pp. 8607-8615
    • Frank, H.A.1    Brudvig, G.W.2
  • 39
    • 0000157456 scopus 로고
    • The photochemistry and function of carotenoids in photosynthesis
    • A Young, G Britton, eds, Chapman and Hall, London
    • Frank HA, Cogdell RJ (1993) The photochemistry and function of carotenoids in photosynthesis. In A Young, G Britton, eds, Carotenoids in Photosynthesis. Chapman and Hall, London, pp 253-326
    • (1993) Carotenoids in Photosynthesis , pp. 253-326
    • Frank, H.A.1    Cogdell, R.J.2
  • 40
    • 45149135688 scopus 로고
    • Chloroplast transit peptides from the green alga Chlamydomonas reinhardtii share features with both mitochondrial and higher plant chloroplast presequences
    • Franzen LG, Rochaix JD, von Heijne G (1990) Chloroplast transit peptides from the green alga Chlamydomonas reinhardtii share features with both mitochondrial and higher plant chloroplast presequences. FEBS Lett 260: 165-168
    • (1990) FEBS Lett , vol.260 , pp. 165-168
    • Franzen, L.G.1    Rochaix, J.D.2    Von Heijne, G.3
  • 42
    • 0033525788 scopus 로고    scopus 로고
    • Mitochondrial evolution
    • Gray MW, Burger G, Lang BF (1999) Mitochondrial evolution. Science 283: 1476-1481
    • (1999) Science , vol.283 , pp. 1476-1481
    • Gray, M.W.1    Burger, G.2    Lang, B.F.3
  • 43
    • 0034093493 scopus 로고    scopus 로고
    • Chlamydomonas reinhardtii and photosynthesis: Genetics to genomics
    • Grossman A (2000) Chlamydomonas reinhardtii and photosynthesis: genetics to genomics. Curr Opin Plant Biol 3: 132-137
    • (2000) Curr Opin Plant Biol , vol.3 , pp. 132-137
    • Grossman, A.1
  • 45
    • 10944249480 scopus 로고    scopus 로고
    • Chlamydomonas reinhardtii in the landscape of pigments
    • Grossman AR, Lohr M, Im CS (2004) Chlamydomonas reinhardtii in the landscape of pigments. Annu Rev Genet 38: 119-173
    • (2004) Annu Rev Genet , vol.38 , pp. 119-173
    • Grossman, A.R.1    Lohr, M.2    Im, C.S.3
  • 46
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41: 95-98
    • (1999) Nucleic Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 48
    • 0033587751 scopus 로고    scopus 로고
    • The violaxanthin cycle protects plants from photooxidative damage by more than one mechanism
    • USA
    • Havaux M, Niyogi KK (1999) The violaxanthin cycle protects plants from photooxidative damage by more than one mechanism. Proc Natl Acad Sci USA 96: 8762-8767
    • (1999) Proc Natl Acad Sci , vol.96 , pp. 8762-8767
    • Havaux, M.1    Niyogi, K.K.2
  • 49
    • 0033042748 scopus 로고    scopus 로고
    • Light-regulated expression of the gsa gene encoding the chlorophyll biosynthetic enzyme glutamate 1-semialdehyde aminotransferase in carotenoid-deficient Chlamydomonas reinhardtii cells
    • Herman CA, Im CS, Beale SI (1999) Light-regulated expression of the gsa gene encoding the chlorophyll biosynthetic enzyme glutamate 1-semialdehyde aminotransferase in carotenoid-deficient Chlamydomonas reinhardtii cells. Plant Mol Biol 39: 289-297
    • (1999) Plant Mol Biol , vol.39 , pp. 289-297
    • Herman, C.A.1    Im, C.S.2    Beale, S.I.3
  • 50
    • 0028986838 scopus 로고
    • 6 in the green alga Chlamydomonas reinhardtii in response to changes in copper availability
    • 6 in the green alga Chlamydomonas reinhardtii in response to changes in copper availability. EMBO J 14: 857-865
    • (1995) EMBO J , vol.14 , pp. 857-865
    • Hill, K.L.1    Merchant, S.2
  • 51
    • 0035049993 scopus 로고    scopus 로고
    • Carotenoid biosynthesis in flowering plants
    • Hirschberg J (2001) Carotenoid biosynthesis in flowering plants. Curr Opin Plant Biol 4: 210-218
    • (2001) Curr Opin Plant Biol , vol.4 , pp. 210-218
    • Hirschberg, J.1
  • 52
    • 0036344963 scopus 로고    scopus 로고
    • Isolation and characterization of a Chlamydomonas gene that encodes a putative blue-light photoreceptor of the phototropin family
    • Huang K, Merkle T, Beck CF (2002) Isolation and characterization of a Chlamydomonas gene that encodes a putative blue-light photoreceptor of the phototropin family. Physiol Plant 115: 613-622
    • (2002) Physiol Plant , vol.115 , pp. 613-622
    • Huang, K.1    Merkle, T.2    Beck, C.F.3
  • 53
    • 0029360424 scopus 로고
    • Metabolism of cyclic carotenoids: A model for the alteration of this biosynthetic pathway in Capsicum annuum chromoplasts
    • Hugueney P, Badillo A, Chen HC, Klein A, Hirschberg J, Camara B, Kuntz M (1995) Metabolism of cyclic carotenoids: a model for the alteration of this biosynthetic pathway in Capsicum annuum chromoplasts. Plant J 8: 417-424
    • (1995) Plant J , vol.8 , pp. 417-424
    • Hugueney, P.1    Badillo, A.2    Chen, H.C.3    Klein, A.4    Hirschberg, J.5    Camara, B.6    Kuntz, M.7
  • 54
    • 0021958933 scopus 로고
    • Codon usage and tRNA content in unicellular and multicellular organisms
    • Ikemura T (1985) Codon usage and tRNA content in unicellular and multicellular organisms. Mol Biol Evol 2: 13-34
    • (1985) Mol Biol Evol , vol.2 , pp. 13-34
    • Ikemura, T.1
  • 55
    • 0028369994 scopus 로고
    • Light regulation of chlorophyll biosynthesis at the level of 5-aminolevulinate formation in Arabidopsis
    • Ilag LL, Kumar AM, Soll D (1994) Light regulation of chlorophyll biosynthesis at the level of 5-aminolevulinate formation in Arabidopsis. Plant Cell 6: 265-275
    • (1994) Plant Cell , vol.6 , pp. 265-275
    • Ilag, L.L.1    Kumar, A.M.2    Soll, D.3
  • 56
    • 0034108965 scopus 로고    scopus 로고
    • Identification of possible signal transduction components mediating light induction of the Gsa gene for an early chlorophyll biosynthetic step in Chlamydomonas reinhardtii
    • Im CS, Beale SI (2000) Identification of possible signal transduction components mediating light induction of the Gsa gene for an early chlorophyll biosynthetic step in Chlamydomonas reinhardtii. Planta 210: 999-1005
    • (2000) Planta , vol.210 , pp. 999-1005
    • Im, C.S.1    Beale, S.I.2
  • 57
    • 0036105460 scopus 로고    scopus 로고
    • Identification and regulation of high light-induced genes in Chlamydomonas reinhardtii
    • Im CS, Grossman AR (2002) Identification and regulation of high light-induced genes in Chlamydomonas reinhardtii. Plant J 30: 301-313
    • (2002) Plant J , vol.30 , pp. 301-313
    • Im, C.S.1    Grossman, A.R.2
  • 58
    • 0030338962 scopus 로고    scopus 로고
    • Calcium and calmodulin are involved in blue light induction of the gsa gene for an early chlorophyll biosynthetic step in Chlamydomonas
    • Im CS, Matters GL, Beale SI (1996) Calcium and calmodulin are involved in blue light induction of the gsa gene for an early chlorophyll biosynthetic step in Chlamydomonas. Plant Cell 8: 2245-2253
    • (1996) Plant Cell , vol.8 , pp. 2245-2253
    • Im, C.S.1    Matters, G.L.2    Beale, S.I.3
  • 60
    • 0019906087 scopus 로고
    • +. II. Cell cycle variation in the synthesis and assembly of pigments
    • +. II. Cell cycle variation in the synthesis and assembly of pigments. J Cell Biol 93: 411-416
    • (1982) J Cell Biol , vol.93 , pp. 411-416
    • Janero, D.R.1    Barrnett, R.2
  • 61
    • 85047690585 scopus 로고
    • Possible control of transcript levels by chlorophyll precursors in Chlamydomonas
    • Johanningmeier U (1988) Possible control of transcript levels by chlorophyll precursors in Chlamydomonas. Eur J Biochem 177: 417-424
    • (1988) Eur J Biochem , vol.177 , pp. 417-424
    • Johanningmeier, U.1
  • 62
    • 0021739749 scopus 로고
    • Regulation of light-harvesting chlorophyll-binding protein mRNA accumulation in Chlamydomonas reinhardtii. Possible involvement of chlorophyll synthesis precursors
    • Johanningmeier U, Howell SH (1984) Regulation of light-harvesting chlorophyll-binding protein mRNA accumulation in Chlamydomonas reinhardtii. Possible involvement of chlorophyll synthesis precursors. J Biol Chem 259: 13541-13549
    • (1984) J Biol Chem , vol.259 , pp. 13541-13549
    • Johanningmeier, U.1    Howell, S.H.2
  • 64
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
    • Krogh A, Larsson B, von Heijne G, Sonnhammer ELL (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol 305: 567-580
    • (2001) J Mol Biol , vol.305 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    Von Heijne, G.3    Sonnhammer, E.L.L.4
  • 65
    • 0031439546 scopus 로고    scopus 로고
    • Chlorophyll precursors are signals of chloroplast origin involved in light induction of nuclear heat-shock genes
    • USA
    • Kropat J, Oster U, Rüdiger W, Beck CF (1997) Chlorophyll precursors are signals of chloroplast origin involved in light induction of nuclear heat-shock genes. Proc Natl Acad Sci USA 94: 14168-14172
    • (1997) Proc Natl Acad Sci , vol.94 , pp. 14168-14172
    • Kropat, J.1    Oster, U.2    Rüdiger, W.3    Beck, C.F.4
  • 66
    • 0030988808 scopus 로고    scopus 로고
    • Developmental and circadian control of the capacity for δ-aminolevulinic acid synthesis in green barley
    • Kruse E, Grimm B, Beator J, Kloppstech K (1997) Developmental and circadian control of the capacity for δ-aminolevulinic acid synthesis in green barley. Planta 202: 235-241
    • (1997) Planta , vol.202 , pp. 235-241
    • Kruse, E.1    Grimm, B.2    Beator, J.3    Kloppstech, K.4
  • 67
    • 85047693604 scopus 로고
    • Coproporphyrinogen III oxidase from barley and tobacco - Sequence analysis and initial expression studies
    • Kruse E, Mock HP, Grimm B (1995) Coproporphyrinogen III oxidase from barley and tobacco - sequence analysis and initial expression studies. Planta 196: 796-803
    • (1995) Planta , vol.196 , pp. 796-803
    • Kruse, E.1    Mock, H.P.2    Grimm, B.3
  • 68
    • 0033181037 scopus 로고    scopus 로고
    • Selective inhibition of HEMA gene expression by photooxidation in Arabidopsis thaliana
    • Kumar AM, Chaturvedi S, Söll D (1999) Selective inhibition of HEMA gene expression by photooxidation in Arabidopsis thaliana. Phytochemistry 51: 847-850
    • (1999) Phytochemistry , vol.51 , pp. 847-850
    • Kumar, A.M.1    Chaturvedi, S.2    Söll, D.3
  • 69
    • 0041374293 scopus 로고    scopus 로고
    • Rapid extraction of RNA and analysis of transcript levels in Chlamydomonas reinhardtii using real-time RT-PCR: Magnesium chelatase chlH, chlD and chlI gene expression
    • Lake V, Willows RD (2003) Rapid extraction of RNA and analysis of transcript levels in Chlamydomonas reinhardtii using real-time RT-PCR: magnesium chelatase chlH, chlD and chlI gene expression. Photosynth Res 77: 69-76
    • (2003) Photosynth Res , vol.77 , pp. 69-76
    • Lake, V.1    Willows, R.D.2
  • 70
    • 0038554229 scopus 로고    scopus 로고
    • Genome organization in Arabidopsis thaliana: A survey for genes involved in isoprenoid and chlorophyll metabolism
    • Lange BM, Ghassemian M (2003) Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. Plant Mol Biol 51: 925-948
    • (2003) Plant Mol Biol , vol.51 , pp. 925-948
    • Lange, B.M.1    Ghassemian, M.2
  • 71
    • 0034700150 scopus 로고    scopus 로고
    • Isoprenoid biosynthesis: The evolution of two ancient and distinct pathways across genomes
    • USA
    • Lange BM, Rujan T, Martin W, Croteau R (2000) Isoprenoid biosynthesis: the evolution of two ancient and distinct pathways across genomes. Proc Natl Acad Sci USA 97: 13172-13177
    • (2000) Proc Natl Acad Sci , vol.97 , pp. 13172-13177
    • Lange, B.M.1    Rujan, T.2    Martin, W.3    Croteau, R.4
  • 72
    • 0030738530 scopus 로고    scopus 로고
    • Cloning and characterization of a plastidal and a mitochondrial isoform of tobacco protoporphyrinogen IX oxidase
    • USA
    • Lermontova I, Kruse E, Mock HP, Grimm B (1997) Cloning and characterization of a plastidal and a mitochondrial isoform of tobacco protoporphyrinogen IX oxidase. Proc Natl Acad Sci USA 94: 8895-8900
    • (1997) Proc Natl Acad Sci , vol.94 , pp. 8895-8900
    • Lermontova, I.1    Kruse, E.2    Mock, H.P.3    Grimm, B.4
  • 73
    • 0031029148 scopus 로고    scopus 로고
    • Siroheme biosynthesis in higher plants. Analysis of an S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase from Arabidopsis thaliana
    • Leustek T, Smith M, Murillo M, Singh DP, Smith AG, Woodcock SC, Awan SJ, Warren MJ (1997) Siroheme biosynthesis in higher plants. Analysis of an S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase from Arabidopsis thaliana. J Biol Chem 272: 2744-2752
    • (1997) J Biol Chem , vol.272 , pp. 2744-2752
    • Leustek, T.1    Smith, M.2    Murillo, M.3    Singh, D.P.4    Smith, A.G.5    Woodcock, S.C.6    Awan, S.J.7    Warren, M.J.8
  • 74
    • 0040396189 scopus 로고
    • The analysis of photosynthesis using mutant strains of algae and higher plants
    • Levine RP (1969) The analysis of photosynthesis using mutant strains of algae and higher plants. Annu Rev Plant Physiol 20: 523-540
    • (1969) Annu Rev Plant Physiol , vol.20 , pp. 523-540
    • Levine, R.P.1
  • 75
    • 0033513375 scopus 로고    scopus 로고
    • The 1-deoxy-D-xylulose-5-phosphate pathway of isoprenoid biosynthesis in plants
    • Lichtenthaler HK (1999) The 1-deoxy-D-xylulose-5-phosphate pathway of isoprenoid biosynthesis in plants. Annu Rev Plant Physiol Plant Mol Biol 50: 47-65
    • (1999) Annu Rev Plant Physiol Plant Mol Biol , vol.50 , pp. 47-65
    • Lichtenthaler, H.K.1
  • 77
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 25: 402-408
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 78
    • 0028965765 scopus 로고
    • Cloning and expression in Escherichia coli of the gene encoding beta-C-4-oxygenase, that converts beta-carotene to the ketocarotenoid canthaxanthin in Haematococcus pluvialis
    • Lotan T, Hirschberg J (1995) Cloning and expression in Escherichia coli of the gene encoding beta-C-4-oxygenase, that converts beta-carotene to the ketocarotenoid canthaxanthin in Haematococcus pluvialis. FEBS Lett 364: 125-128
    • (1995) FEBS Lett , vol.364 , pp. 125-128
    • Lotan, T.1    Hirschberg, J.2
  • 79
    • 0037447051 scopus 로고    scopus 로고
    • Evidence for direct carotenoid involvement in the regulation of photosynthetic light harvesting
    • USA
    • Ma YZ, Holt NE, Li XP, Niyogi KK, Fleming GR (2003) Evidence for direct carotenoid involvement in the regulation of photosynthetic light harvesting. Proc Natl Acad Sci USA 100: 4377-4382
    • (2003) Proc Natl Acad Sci , vol.100 , pp. 4377-4382
    • Ma, Y.Z.1    Holt, N.E.2    Li, X.P.3    Niyogi, K.K.4    Fleming, G.R.5
  • 82
    • 0028369225 scopus 로고
    • Structure and light-regulated expression of the gsa gene encoding the chlorophyll biosynthetic enzyme, glutamate 1-semialdehyde aminotransferase, in Chlamydomonas reinhardtii
    • Matters GL, Beale SI (1994) Structure and light-regulated expression of the gsa gene encoding the chlorophyll biosynthetic enzyme, glutamate 1-semialdehyde aminotransferase, in Chlamydomonas reinhardtii. Plant Mol Biol 24: 617-629
    • (1994) Plant Mol Biol , vol.24 , pp. 617-629
    • Matters, G.L.1    Beale, S.I.2
  • 83
    • 0028876615 scopus 로고
    • Blue-light-regulated expression of genes for two early steps of chlorophyll biosynthesis in Chlamydomonas reinhardtii
    • Matters GL, Beale SI (1995) Blue-light-regulated expression of genes for two early steps of chlorophyll biosynthesis in Chlamydomonas reinhardtii. Plant Physiol 109: 471-479
    • (1995) Plant Physiol , vol.109 , pp. 471-479
    • Matters, G.L.1    Beale, S.I.2
  • 84
    • 0035034119 scopus 로고    scopus 로고
    • Regulation of HEMA1 expression by phytochrome and a plastid signal during deetiolation in Arabidopsis thaliana
    • McCormac AC, Fischer A, Kumar AM, Soll D, Terry MJ (2001) Regulation of HEMA1 expression by phytochrome and a plastid signal during deetiolation in Arabidopsis thaliana. Plant J 25: 549-561
    • (2001) Plant J , vol.25 , pp. 549-561
    • McCormac, A.C.1    Fischer, A.2    Kumar, A.M.3    Soll, D.4    Terry, M.J.5
  • 85
    • 0034044314 scopus 로고    scopus 로고
    • The PSIPRED protein structure prediction server
    • McGuffin LJ, Bryson K, Jones DT (2000) The PSIPRED protein structure prediction server. Bioinformatics 16: 404-405
    • (2000) Bioinformatics , vol.16 , pp. 404-405
    • McGuffin, L.J.1    Bryson, K.2    Jones, D.T.3
  • 86
    • 0028126660 scopus 로고
    • Expression of a tomato cDNA coding for phytoene synthase in Escherichia coli, phytoene formation in vivo and in vitro, and functional analysis of the various truncated gene products
    • Tokyo
    • Misawa N, Truesdale MR, Sandmann G, Fraser PD, Bird C, Schuch W, Bramley PM (1994) Expression of a tomato cDNA coding for phytoene synthase in Escherichia coli, phytoene formation in vivo and in vitro, and functional analysis of the various truncated gene products. J Biochem (Tokyo) 116: 980-985
    • (1994) J Biochem , vol.116 , pp. 980-985
    • Misawa, N.1    Truesdale, M.R.2    Sandmann, G.3    Fraser, P.D.4    Bird, C.5    Schuch, W.6    Bramley, P.M.7
  • 87
    • 0029294036 scopus 로고
    • Isolation, sequencing and expression of cDNA sequences encoding uroporphyrinogen decarboxylase from tobacco and barley
    • Mock HP, Trainotti L, Kruse E, Grimm B (1995) Isolation, sequencing and expression of cDNA sequences encoding uroporphyrinogen decarboxylase from tobacco and barley. Plant Mol Biol 28: 245-256
    • (1995) Plant Mol Biol , vol.28 , pp. 245-256
    • Mock, H.P.1    Trainotti, L.2    Kruse, E.3    Grimm, B.4
  • 89
    • 0034658505 scopus 로고    scopus 로고
    • The Crd1 gene encodes a putative di-iron enzyme required for photosystem I accumulation in copper deficiency and hypoxia in Chlamydomonas reinhardtii
    • Moseley J, Quinn J, Eriksson M, Merchant S (2000) The Crd1 gene encodes a putative di-iron enzyme required for photosystem I accumulation in copper deficiency and hypoxia in Chlamydomonas reinhardtii. EMBO J 219: 2139-2151
    • (2000) EMBO J , vol.219 , pp. 2139-2151
    • Moseley, J.1    Quinn, J.2    Eriksson, M.3    Merchant, S.4
  • 90
    • 1942519271 scopus 로고    scopus 로고
    • Domain structures of chlorophyllide a oxygenase of green plants and Prochlorothrix hollandica in relation to catalytic functions
    • Nagata N, Satoh S, Tanaka R, Tanaka A (2004) Domain structures of chlorophyllide a oxygenase of green plants and Prochlorothrix hollandica in relation to catalytic functions. Planta 218: 1019-1025
    • (2004) Planta , vol.218 , pp. 1019-1025
    • Nagata, N.1    Satoh, S.2    Tanaka, R.3    Tanaka, A.4
  • 92
    • 0035919773 scopus 로고    scopus 로고
    • Translational selection shapes codon usage in the GC-rich genome of Chlamydomonas reinhardtii
    • Naya H, Romero H, Carels N, Zavala A, Musto H (2001) Translational selection shapes codon usage in the GC-rich genome of Chlamydomonas reinhardtii. FEBS Lett 501: 127-130
    • (2001) FEBS Lett , vol.501 , pp. 127-130
    • Naya, H.1    Romero, H.2    Carels, N.3    Zavala, A.4    Musto, H.5
  • 93
    • 0030614959 scopus 로고    scopus 로고
    • Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
    • Nielsen H, Engelbrecht J, Brunak S, von Heijne G (1997) Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng 10: 1-6
    • (1997) Protein Eng , vol.10 , pp. 1-6
    • Nielsen, H.1    Engelbrecht, J.2    Brunak, S.3    Von Heijne, G.4
  • 94
    • 0033506468 scopus 로고    scopus 로고
    • Photoprotection revisited: Genetic and molecular approaches
    • Niyogi KK (1999) Photoprotection revisited: genetic and molecular approaches. Annu Rev Plant Physiol Plant Mol Biol 50: 333-359
    • (1999) Annu Rev Plant Physiol Plant Mol Biol , vol.50 , pp. 333-359
    • Niyogi, K.K.1
  • 95
    • 0034002980 scopus 로고    scopus 로고
    • Five geranylgeranyl diphosphate synthases expressed in different organs are localized into three subcellular compartments in Arabidopsis
    • Okada K, Saito T, Nakagawa T, Kawamukai M, Kamiya Y (2000) Five geranylgeranyl diphosphate synthases expressed in different organs are localized into three subcellular compartments in Arabidopsis. Plant Physiol 122: 1045-1056
    • (2000) Plant Physiol , vol.122 , pp. 1045-1056
    • Okada, K.1    Saito, T.2    Nakagawa, T.3    Kawamukai, M.4    Kamiya, Y.5
  • 96
    • 0034058987 scopus 로고    scopus 로고
    • Cloning and functional expression of the gene encoding the key enzyme for chlorophyll b biosynthesis (CAO) from Arabidopsis thaliana
    • Oster U, Tanaka R, Tanaka A, Rüdiger W (2000) Cloning and functional expression of the gene encoding the key enzyme for chlorophyll b biosynthesis (CAO) from Arabidopsis thaliana. Plant J 21: 305-310
    • (2000) Plant J , vol.21 , pp. 305-310
    • Oster, U.1    Tanaka, R.2    Tanaka, A.3    Rüdiger, W.4
  • 97
    • 0036667415 scopus 로고    scopus 로고
    • A whole genome view of prokaryotic haem biosynthesis
    • Panek H, O'Brian MR (2002) A whole genome view of prokaryotic haem biosynthesis. Microbiol 148: 2273-2282
    • (2002) Microbiol , vol.148 , pp. 2273-2282
    • Panek, H.1    O'Brian, M.R.2
  • 98
    • 0343294295 scopus 로고    scopus 로고
    • Decreased and increased expression of the subunit CHL I diminishes Mg chelatase activity and reduces chlorophyll synthesis in transgenic tobacco plants
    • Papenbrock J, Pfündel E, Mock HP, Grimm B (2000) Decreased and increased expression of the subunit CHL I diminishes Mg chelatase activity and reduces chlorophyll synthesis in transgenic tobacco plants. Plant J 22: 155-164
    • (2000) Plant J , vol.22 , pp. 155-164
    • Papenbrock, J.1    Pfündel, E.2    Mock, H.P.3    Grimm, B.4
  • 99
    • 0034730975 scopus 로고    scopus 로고
    • Genetic manipulation of carotenoid biosynthesis and photoprotection
    • Pogson BJ, Rissler HM (2000) Genetic manipulation of carotenoid biosynthesis and photoprotection. Philos Trans R Soc Lond B Biol Sci 355: 1395-1403
    • (2000) Philos Trans R Soc Lond B Biol Sci , vol.355 , pp. 1395-1403
    • Pogson, B.J.1    Rissler, H.M.2
  • 100
    • 0028693405 scopus 로고
    • Signal transduction in the sexual life of Chlamydomonas
    • Quarmby LM (1994) Signal transduction in the sexual life of Chlamydomonas. Plant Mol Biol 26: 1271-1287
    • (1994) Plant Mol Biol , vol.26 , pp. 1271-1287
    • Quarmby, L.M.1
  • 101
    • 0037070556 scopus 로고    scopus 로고
    • Functional analysis of the Arabidopsis thaliana GCPE protein involved in plastid isoprenoid biosynthesis
    • Querol J, Campos N, Imperial S, Boronat A, Rodriguez-Concepcion M (2002) Functional analysis of the Arabidopsis thaliana GCPE protein involved in plastid isoprenoid biosynthesis. FEBS Lett 514: 343-346
    • (2002) FEBS Lett , vol.514 , pp. 343-346
    • Querol, J.1    Campos, N.2    Imperial, S.3    Boronat, A.4    Rodriguez-Concepcion, M.5
  • 102
    • 0033553513 scopus 로고    scopus 로고
    • Induction of coproporphyrinogen oxidase in Chlamydomonas chloroplasts occurs via transcriptional regulation of Cpx1 mediated by copper response elements and increased translation from a copper deficiency-specific form of the transcript
    • Quinn JM, Nakamoto SS, Merchant S (1999) Induction of coproporphyrinogen oxidase in Chlamydomonas chloroplasts occurs via transcriptional regulation of Cpx1 mediated by copper response elements and increased translation from a copper deficiency-specific form of the transcript. J Biol Chem 274: 14444-14454
    • (1999) J Biol Chem , vol.274 , pp. 14444-14454
    • Quinn, J.M.1    Nakamoto, S.S.2    Merchant, S.3
  • 103
    • 2542430082 scopus 로고    scopus 로고
    • Methionine metabolism in plants. Chloroplasts are autonomous for de novo methionine synthesis and can import S-adenosylmethionine from the cytosol
    • Ravanel S, Block MA, Rippert P, Jabrin S, Curien G, Ré beillé F, Douce R (2004) Methionine metabolism in plants. Chloroplasts are autonomous for de novo methionine synthesis and can import S-adenosylmethionine from the cytosol. J Biol Chem 279: 22548-22557
    • (2004) J Biol Chem , vol.279 , pp. 22548-22557
    • Ravanel, S.1    Block, M.A.2    Rippert, P.3    Jabrin, S.4    Curien, G.5    Ré beillé, F.6    Douce, R.7
  • 104
    • 0030572675 scopus 로고    scopus 로고
    • Evolution of chlorophyll biosynthesis - The challenge to survive photooxidation
    • Reinbothe S, Reinbothe C, Apel K, Lebedev N (1996) Evolution of chlorophyll biosynthesis - the challenge to survive photooxidation. Cell 86: 703-705
    • (1996) Cell , vol.86 , pp. 703-705
    • Reinbothe, S.1    Reinbothe, C.2    Apel, K.3    Lebedev, N.4
  • 105
    • 0037010172 scopus 로고    scopus 로고
    • Chlamydomonas, a model system for studying the assembly and dynamics of photosynthetic complexes
    • Rochaix JD (2002) Chlamydomonas, a model system for studying the assembly and dynamics of photosynthetic complexes. FEBS Lett 529: 34-38
    • (2002) FEBS Lett , vol.529 , pp. 34-38
    • Rochaix, J.D.1
  • 106
    • 0036851226 scopus 로고    scopus 로고
    • Elucidation of the methylerythritol phosphate pathway for isoprenoid biosynthesis in bacteria and plastids. A metabolic milestone achieved through genomics
    • Rodriguez-Concepcion M, Boronat A (2002) Elucidation of the methylerythritol phosphate pathway for isoprenoid biosynthesis in bacteria and plastids. A metabolic milestone achieved through genomics. Plant Physiol 130: 1079-1089
    • (2002) Plant Physiol , vol.130 , pp. 1079-1089
    • Rodriguez-Concepcion, M.1    Boronat, A.2
  • 107
    • 0037313208 scopus 로고    scopus 로고
    • Mevalonate-independent methylerythritol phosphate pathway for isoprenoid biosynthesis. Elucidation and distribution
    • Rohmer M (2003) Mevalonate-independent methylerythritol phosphate pathway for isoprenoid biosynthesis. Elucidation and distribution. Pure Appl Chem 75: 375-387
    • (2003) Pure Appl Chem , vol.75 , pp. 375-387
    • Rohmer, M.1
  • 108
    • 0034718562 scopus 로고    scopus 로고
    • An alternative pathway to β-carotene formation in plant chromoplasts discovered by map-based cloning of beta and old-gold color mutations in tomato
    • USA
    • Ronen G, Carmel-Goren L, Zamir D, Hirschberg J (2000) An alternative pathway to β-carotene formation in plant chromoplasts discovered by map-based cloning of beta and old-gold color mutations in tomato. Proc Natl Acad Sci USA 97: 11102-11107
    • (2000) Proc Natl Acad Sci , vol.97 , pp. 11102-11107
    • Ronen, G.1    Carmel-Goren, L.2    Zamir, D.3    Hirschberg, J.4
  • 109
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • S Krawetz, S Misener, eds, Humana Press, Totowa, NJ
    • Rozen S, Skaletsky HJ (2000) Primer3 on the WWW for general users and for biologist programmers. In S Krawetz, S Misener, eds, Bioinformatics Methods and Protocols: Methods in Molecular Biology. Humana Press, Totowa, NJ, pp 365-386
    • (2000) Bioinformatics Methods and Protocols: Methods in Molecular Biology , pp. 365-386
    • Rozen, S.1    Skaletsky, H.J.2
  • 110
    • 31344461177 scopus 로고    scopus 로고
    • Redox reactions in the last steps of chlorophyll biosynthesis
    • JH Argyroudi-Akoyunoglou, H Senger, eds, Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Rüdiger W, Klement H, Helfrich M, Tanaka A, Schoch S, Oster U (1999) Redox reactions in the last steps of chlorophyll biosynthesis. In JH Argyroudi-Akoyunoglou, H Senger, eds, The Chloroplast: From Molecular Biology to Biotechnology. Kluwer Academic Publishers, Dordrecht, The Netherlands, pp 185-190
    • (1999) The Chloroplast: from Molecular Biology to Biotechnology , pp. 185-190
    • Rüdiger, W.1    Klement, H.2    Helfrich, M.3    Tanaka, A.4    Schoch, S.5    Oster, U.6
  • 111
    • 0008615417 scopus 로고    scopus 로고
    • Molecular characterisation of coproporphyrinogen oxidase from Glycine max and Arabidopsis thaliana
    • Santana MA, Tan FC, Smith AG (2002) Molecular characterisation of coproporphyrinogen oxidase from Glycine max and Arabidopsis thaliana. Plant Physiol Biochem 40: 289-298
    • (2002) Plant Physiol Biochem , vol.40 , pp. 289-298
    • Santana, M.A.1    Tan, F.C.2    Smith, A.G.3
  • 112
    • 0023274170 scopus 로고
    • The rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias
    • Sharp PM, Li WH (1987) The rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias. Mol Biol Evol 4: 222-230
    • (1987) Mol Biol Evol , vol.4 , pp. 222-230
    • Sharp, P.M.1    Li, W.H.2
  • 113
    • 0023046874 scopus 로고
    • Codon usage in yeast: Cluster analysis clearly differentiates highly and lowly expressed genes
    • Sharp PM, Tuohy TM, Mosurski KR (1986) Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes. Nucleic Acids Res 14: 5125-5143
    • (1986) Nucleic Acids Res , vol.14 , pp. 5125-5143
    • Sharp, P.M.1    Tuohy, T.M.2    Mosurski, K.R.3
  • 115
    • 84989667481 scopus 로고
    • The light-harvesting and protective functions of carotenoids in photosynthetic membranes
    • Siefermann-Harms D (1987) The light-harvesting and protective functions of carotenoids in photosynthetic membranes. Physiol Plant 69: 561-568
    • (1987) Physiol Plant , vol.69 , pp. 561-568
    • Siefermann-Harms, D.1
  • 116
    • 0035984030 scopus 로고    scopus 로고
    • Mining the treasure trove of algal chloroplast genomes: Surprises in architecture and gene content, and their functional implications
    • Simpson CL, Stern DB (2002) Mining the treasure trove of algal chloroplast genomes: surprises in architecture and gene content, and their functional implications. Plant Physiol 129: 957-966
    • (2002) Plant Physiol , vol.129 , pp. 957-966
    • Simpson, C.L.1    Stern, D.B.2
  • 117
    • 2942589051 scopus 로고    scopus 로고
    • Predotar: A tool for rapidly screening proteomes for N-terminal targeting sequences
    • Small I, Peeters N, Legeai F, Lurin C (2004) Predotar: a tool for rapidly screening proteomes for N-terminal targeting sequences. Proteomics 4: 1581-1590
    • (2004) Proteomics , vol.4 , pp. 1581-1590
    • Small, I.1    Peeters, N.2    Legeai, F.3    Lurin, C.4
  • 118
    • 0030158571 scopus 로고    scopus 로고
    • The Staden sequence analysis package
    • Staden R (1996) The Staden sequence analysis package. Mol Biotechnol 5: 233-241
    • (1996) Mol Biotechnol , vol.5 , pp. 233-241
    • Staden, R.1
  • 119
    • 0037868855 scopus 로고    scopus 로고
    • Crystal structure of the type II isopentenyl diphosphate:dimethylallyl diphosphate isomerase from Bacillus subtilis
    • Steinbacher S, Kaiser J, Gerhardt S, Eisenreich W, Huber R, Bacher A, Rohdich F (2003) Crystal structure of the type II isopentenyl diphosphate:dimethylallyl diphosphate isomerase from Bacillus subtilis. J Mol Biol 329: 973-982
    • (2003) J Mol Biol , vol.329 , pp. 973-982
    • Steinbacher, S.1    Kaiser, J.2    Gerhardt, S.3    Eisenreich, W.4    Huber, R.5    Bacher, A.6    Rohdich, F.7
  • 120
    • 0035109395 scopus 로고    scopus 로고
    • Regulation of two carotenoid biosynthesis genes coding for phytoene synthase and carotenoid hydroxylase during stress-induced astaxanthin formation in the green alga Haematococcus pluvialis
    • Steinbrenner J, Linden H (2001) Regulation of two carotenoid biosynthesis genes coding for phytoene synthase and carotenoid hydroxylase during stress-induced astaxanthin formation in the green alga Haematococcus pluvialis. Plant Physiol 125: 810-817
    • (2001) Plant Physiol , vol.125 , pp. 810-817
    • Steinbrenner, J.1    Linden, H.2
  • 121
    • 0347927268 scopus 로고    scopus 로고
    • Chloroplast to nucleus communication triggered by accumulation of Mg-protoporphyrin IX
    • Strand A, Asami T, Alonso J, Ecker JR, Chory J (2003) Chloroplast to nucleus communication triggered by accumulation of Mg-protoporphyrin IX. Nature 421: 79-83
    • (2003) Nature , vol.421 , pp. 79-83
    • Strand, A.1    Asami, T.2    Alonso, J.3    Ecker, J.R.4    Chory, J.5
  • 123
    • 0032514698 scopus 로고    scopus 로고
    • Chlorophyll a oxygenase (CAO) is involved in chlorophyll b formation from chlorophyll a
    • USA
    • Tanaka A, Ito H, Tanaka R, Tanaka NK, Yoshida K, Okada K (1998) Chlorophyll a oxygenase (CAO) is involved in chlorophyll b formation from chlorophyll a. Proc Natl Acad Sci USA 95: 12719-12723
    • (1998) Proc Natl Acad Sci , vol.95 , pp. 12719-12723
    • Tanaka, A.1    Ito, H.2    Tanaka, R.3    Tanaka, N.K.4    Yoshida, K.5    Okada, K.6
  • 124
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 125
    • 0033536171 scopus 로고    scopus 로고
    • Chlorophyll b and phycobilins in the common ancestor of cyanobacteria and chloroplasts
    • Tomitani A, Okada K, Miyashita H, Matthijs HC, Ohno T, Tanaka A (1999) Chlorophyll b and phycobilins in the common ancestor of cyanobacteria and chloroplasts. Nature 400: 159-162
    • (1999) Nature , vol.400 , pp. 159-162
    • Tomitani, A.1    Okada, K.2    Miyashita, H.3    Matthijs, H.C.4    Ohno, T.5    Tanaka, A.6
  • 128
    • 1842861617 scopus 로고    scopus 로고
    • The transit peptide of CP29 thylakoid protein in Chlamydomonas reinhardtii is not removed but undergoes acetylation and phosphorylation
    • Turkina MV, Villarejo A, Vener AV (2004) The transit peptide of CP29 thylakoid protein in Chlamydomonas reinhardtii is not removed but undergoes acetylation and phosphorylation. FEBS Lett 564: 104-108
    • (2004) FEBS Lett , vol.564 , pp. 104-108
    • Turkina, M.V.1    Villarejo, A.2    Vener, A.V.3
  • 129
    • 0035984363 scopus 로고    scopus 로고
    • Divergent regulation of the HEMA gene family encoding glutamyl-tRNA reductase in Arabidopsis thaliana: Expression of HEMA2 is regulated by sugars, but is independent of light and plastid signalling
    • Ujwal ML, McCormac AC, Goulding A, Kumar AM, Soll D, Terry MJ (2002) Divergent regulation of the HEMA gene family encoding glutamyl-tRNA reductase in Arabidopsis thaliana: expression of HEMA2 is regulated by sugars, but is independent of light and plastid signalling. Plant Mol Biol 50: 83-91
    • (2002) Plant Mol Biol , vol.50 , pp. 83-91
    • Ujwal, M.L.1    McCormac, A.C.2    Goulding, A.3    Kumar, A.M.4    Soll, D.5    Terry, M.J.6
  • 130
    • 0028509254 scopus 로고
    • TREECON for Windows: A software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
    • Van de Peer Y, De Wachter R (1994) TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput Appl Biosci 10: 569-570
    • (1994) Comput Appl Biosci , vol.10 , pp. 569-570
    • Van De Peer, Y.1    De Wachter, R.2
  • 131
    • 0036258715 scopus 로고    scopus 로고
    • Regulation of the tetrapyrrole biosynthetic pathway leading to heme and chlorophyll in plants and cyanobacteria
    • Vavilin DV, Vermaas WFJ (2002) Regulation of the tetrapyrrole biosynthetic pathway leading to heme and chlorophyll in plants and cyanobacteria. Physiol Plant 115: 9-24
    • (2002) Physiol Plant , vol.115 , pp. 9-24
    • Vavilin, D.V.1    Vermaas, W.F.J.2
  • 132
    • 0024542834 scopus 로고
    • Domain structure of mitochondrial and chloroplast targeting peptides
    • von Heijne G, Steppuhn J, Herrmann RG (1989) Domain structure of mitochondrial and chloroplast targeting peptides. Eur J Biochem 180: 535-545
    • (1989) Eur J Biochem , vol.180 , pp. 535-545
    • Von Heijne, G.1    Steppuhn, J.2    Herrmann, R.G.3
  • 133
    • 0030662568 scopus 로고    scopus 로고
    • Mechanism and regulation of Mg-chelatase
    • Walker CJ, Willows RD (1997) Mechanism and regulation of Mg-chelatase. Biochem J 327: 321-333
    • (1997) Biochem J , vol.327 , pp. 321-333
    • Walker, C.J.1    Willows, R.D.2
  • 134
    • 0036679353 scopus 로고    scopus 로고
    • Two distantly related genes encoding 1-deoxy-d-xylulose 5-phosphate synthases: Differential regulation in shoots and apocarotenoid-accumulating mycorrhizal roots
    • Walter MH, Hans J, Strack D (2002) Two distantly related genes encoding 1-deoxy-d-xylulose 5-phosphate synthases: differential regulation in shoots and apocarotenoid-accumulating mycorrhizal roots. Plant J 31: 243-254
    • (2002) Plant J , vol.31 , pp. 243-254
    • Walter, M.H.1    Hans, J.2    Strack, D.3
  • 135
    • 0038714991 scopus 로고    scopus 로고
    • Expression of xanthophyll biosynthetic genes during light-dependent chloroplast differentiation
    • Woitsch S, Romer S (2003) Expression of xanthophyll biosynthetic genes during light-dependent chloroplast differentiation. Plant Physiol 132: 1508-1517
    • (2003) Plant Physiol , vol.132 , pp. 1508-1517
    • Woitsch, S.1    Romer, S.2
  • 136
    • 0025318864 scopus 로고
    • The effective number of codons used in a gene
    • Wright F (1990) The effective number of codons used in a gene. Gene 87: 23-29
    • (1990) Gene , vol.87 , pp. 23-29
    • Wright, F.1
  • 137
    • 0035923691 scopus 로고    scopus 로고
    • Chlorophyll b can serve as the major pigment in functional photosystem II complexes of cyanobacteria
    • USA
    • Xu H, Vavilin D, Vermaas W (2001) Chlorophyll b can serve as the major pigment in functional photosystem II complexes of cyanobacteria. Proc Natl Acad Sci USA 98: 14168-14173
    • (2001) Proc Natl Acad Sci , vol.98 , pp. 14168-14173
    • Xu, H.1    Vavilin, D.2    Vermaas, W.3
  • 138
    • 0000882260 scopus 로고    scopus 로고
    • Carotenoids: Localization and function
    • DR Ort, CF Yocum, eds, Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Yamamoto HY, Bassi R (1996) Carotenoids: localization and function. In DR Ort, CF Yocum, eds, Oxygenic Photosynthesis: The Light Reactions. Kluwer Academic Publishers, Dordrecht, The Netherlands, pp 539-563
    • (1996) Oxygenic Photosynthesis: The Light Reactions , pp. 539-563
    • Yamamoto, H.Y.1    Bassi, R.2
  • 139
    • 0000612361 scopus 로고    scopus 로고
    • Biochemistry and molecular biology of the xanthophyll cycle
    • HA Frank, AJ Young, G Britton, RJ Cogdell, eds, Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Yamamoto HY, Bugos RC, Hieber AD (1999) Biochemistry and molecular biology of the xanthophyll cycle. In HA Frank, AJ Young, G Britton, RJ Cogdell, eds, The Photochemistry of Carotenoids, Vol 8. Kluwer Academic Publishers, Dordrecht, The Netherlands, pp 293-303
    • (1999) The Photochemistry of Carotenoids , vol.8 , pp. 293-303
    • Yamamoto, H.Y.1    Bugos, R.C.2    Hieber, A.D.3
  • 141
    • 6344221872 scopus 로고    scopus 로고
    • Genome based analysis of sulfur deprivation of wild-type cells and the sac1 mutant of Chlamydomonas
    • Zhang Z, Shrager J, Chang C-W, Vallon O, Grossman AR (2004) Genome based analysis of sulfur deprivation of wild-type cells and the sac1 mutant of Chlamydomonas. Eukaryot Cell 3: 1331-1348
    • (2004) Eukaryot Cell , vol.3 , pp. 1331-1348
    • Zhang, Z.1    Shrager, J.2    Chang, C.-W.3    Vallon, O.4    Grossman, A.R.5
  • 142
    • 0031259972 scopus 로고    scopus 로고
    • Geranylgeranyl pyrophosphate synthase encoded by the newly isolated gene GGPS6 from Arabidopsis thaliana is localized in mitochondria
    • Zhu XF, Suzuki K, Saito T, Okada K, Tanaka K, Nakagawa T, Matsuda H, Kawamukai M (1997) Geranylgeranyl pyrophosphate synthase encoded by the newly isolated gene GGPS6 from Arabidopsis thaliana is localized in mitochondria. Plant Mol Biol 35: 331-341
    • (1997) Plant Mol Biol , vol.35 , pp. 331-341
    • Zhu, X.F.1    Suzuki, K.2    Saito, T.3    Okada, K.4    Tanaka, K.5    Nakagawa, T.6    Matsuda, H.7    Kawamukai, M.8


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