Genetic diversity and differentiation of Nile tilapia (Oreochromis niloticus) revealed by DNA microsatellites

Aquaculture Research

Volumn 36, Issue 14, 2005, Pages 1450-1457

  Hassanien, Hesham Abdallah ^a,c   Gilbey, John ^b  

^a CAIRO UNIVERSITY   (Egypt)

^b MARINE LABORATORY   (United Kingdom)

^c NONE   (Egypt)

Author keywords

Genetic variation; Microsatellite; Oreochromis niloticus

Indexed keywords

GENETIC VARIATION;

OREOCHROMIS NILOTICUS; TILAPIA;

EID: 27244431919     PISSN: 1355557X     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-2109.2005.01368.x     Document Type: Article

References (48)

1. Agnese J., Adepo Gourene B., Abban E.K. & Fermon Y. (1997) Genetic differentiation among natural populations of the Nile tilapia Oreochromis niloticus (Teleostei Cichlidae). Heredity 79, 88-96.
2. Agnese J., Gourene B., Owino J., Pouyaud L. & Aman R. (1999) Genetic characterization of a pure relict population of Oreochromis esculentus, an endangered tilapia. Journal of Fish Biology 54, 1119-1123.
3. Agresti J.J., Seki S., Cnaani A., Poompuang S., Hallerman E.M., Umiel N., Hulata G., Gall G.A.E. & May B. (2000) Breeding new strains of tilapia: development of an artificial center of origin and linkage map based on AFLP and microsatellite loci. Aquaculture 185, 43-56.
4. Avtalion R.R., Duczyminer M., Wodjani A. & Pruginin Y. (1976) Determination of allogeneic and xenogeneic markers in the genus of Tilapia: II. Identification of T. aurea, T. vulcani, and T. nilotica by electrophoretic analysis of their serum proteins. Aquaculture 7, 255-265.
5. Bardakci F. & Skibinski D.O.F. (1994) Application of the RAPD technique in tilapia fish: species and subspecies identification. Heredity 73, 117-123.
6. Basiao Z.U. & Taniguchi N. (1984) An investigation of enzyme and other protein polymorphisms in Japanese stocks of the tilapias (Oreochromis niloticus and Tilapia zillii). Aquaculture 38, 335-345.
7. Bhassu S., Yusoff K., Panandam J.M., Embong W.K., Oyyan S. & Tan S.G. (2004) The genetic structure of Oreochromis spp. (Tilapia) populations in Malaysia as revealed by microsatellite DNA analysis. Biochemical Genetics 42, 217-229.
8. Blankenship H.L. & Leber K.M. (1995) A responsible approach to marine stock enhancement. American Fisheries Society Symposium 15, 167-175.
9. Brummett R.E., Halstrom M.L., Dunham R.A. & Smitherman R.O. (1988) Development of biochemical dichotomous keys for identification of American population of Oreochromis aureus, O. mossambicus, O. niloticus, O. urolepis hornorum and red tilapia. In: The Second International Symposium on Tilapia in Aquaculture, ICLARM Conference Proceedings 15 (ed. by R.S.V. Pullin, T. Bhukaswan, K. Tonguthai & J.L. Maclean), pp. 135-141. Department of Fisheries, Bangkok, Thailand, 623pp.
10. Cagigas M.E., Vazquez E., Blanco G. & Sanchez J.A. (1999) Combined assessment of genetic variability in populations of brown trout (Salmo trutto L.) based on allozymes, microsatellites, and rapid markers. Marine Biotechnology 1, 286-296.
11. Carvalho G.R. & Hauser L. (1994) Genetic impacts of fish introductions: an African perspective. In: Species Changes in African lakes (ed. by T.J. Pitcher & P. Hart), Chapman & Hall, London, UK.
12. 2 tilapia hybrid. Aquaculture 223, 117-128.
13. Davis G.P. & Hetzel D.J.S. (2000) Integrating molecular genetic technology with traditional approaches for genetic improvement in aquaculture species. Aquaculture Research 31, 3-10.
14. Dinesh K.R., Chan W.K., Lim T.M. & Phang V.P. (1996) Genetic variation inferred from RAPD fingerprinting in three species of tilapia. Aquaculture International 4, 19-30.
15. Engelbrecht G.D. & Mulder P.F. (1999) Extremely high genetic differentiation between two populations of the river goby, Glossogobius callidus (Smith, 1937). Water SA 25, 85-90.
16. Food and Agriculture Organization (2001) Fisheries statistics. Website: http://www.fao.org/fi/statist/summtab/default.asp.
17. Fuerst P.A., Mwanja W.W. & Kaufman L. (2000) The genetic history of the introduced Nile Tilapia of Lake Victoria (Uganda-E. Africa): the population structure of Oreochromis niloticus (Pisces: Cichlidae) revealed by DNA microsatellite markers. In: Tilapia Aquaculture in the 21st Century. Proceedings from the Fifth International Symposium on Tilapia in Aquaculture, Vol. 1 (ed. by K. Fitzsimmons & J. Carvalho Filho), pp. 30-41. Ministry of Agriculture, Rio de Janeiro, Brazil.
18. Geist J. & Kuehn R. (2005) Genetic diversity and differentiation of central European freshwater pearl mussel (Margaritifera margaritifera L.) populations: implications for conservation and management. Molecular Ecology 14, 425-439.
19. Hartl D.L. & Clark A.G. (1989) Principles of Population Genetics, 2nd edn. Sinauer Associates, Sunderland, MA, USA, pp. 282-296.
20. Hassanien H.A., Elnady M., Obeida A. & Itriby H. (2004) Genetic diversity of Nile tilapia populations revealed by randomly amplified polymorphic DNA (RAPD). Aquaculture Research 35, 587-593.
21. Jarne P. & Lagoda J.L. (1996) Microsatellites, from molecules to populations and back. Trends in Ecology and Evolution 8, 285-288.
22. Jenneckens I., Muller-Belecke A., Horstgen-Schwark G. & Meyer J.N. (1999) Proof of the successful development of Nile tilapia (Oreochromis niloticus) clones by DNA fingerprinting. Aquaculture 173, 377-388.
23. Kocher T.D., Lee W.J., Sobolewska H., Penman D. & McAndrew B.J. (1998) A genetic linkage map of a cichlid fish, the tilapia (Oreochromis niloticus). Genetics 148, 1225-1232.
24. Kumar S., Tamura K. & Nei M. (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in bioinformatics 5, 150-163.
25. Lee W.J. & Kocher T.D. (1996) Microsatellite DNA markers for genetic mapping in the tilapia, Oreochromis niloticus. Journal of Fish Biology 49, 169-171.
26. Macaranas J.M., Taniguchi N., Pante M.J.R., Capili J.B. & Pullin R.S.V. (1986) Electrophoretic evidence for extensive hybrid gene introgression into commercial Oreochromis niloticus L. stocks in the Philippines. Aquaculture Fish Management 17, 249-258.
27. Macaranas J.M., Agustin L.Q., Ablan M.C.A., Pante M.J.R., Eknath A.E. & Pullin R.S.V. (1995) Genetic improvement of farmed tilapias: biochemical characterization of strain differences in Nile tilapia. Aquaculture International 3, 43-54.
28. McAndrew B.J. & Majumdar K.C. (1983) Tilapia stock identification using electrophoretic markers. Aquaculture 30, 249-261.
29. Naish K.A., Warren M., Bardakci F., Skibinski D.O., Carvalho G.R. & Mair G.C. (1995) Multilocus DNA fingerprintingand RAPD reveal similar genetic relationships between strains of Oreochromis niloticus (Pisces: Cichlidae). Molecular Ecology 4, 271-274.
30. Nei M. (1972) Genetic distance between populations. The American Naturalist 106, 283-289.
31. O'Connell M. & Wright J.M. (1997) Microsatellite DNA in fishes. Reviews in Fish Biology and Fisheries 7, 331-363.
32. O'Reilly P. & Wright J.M. (1995) The evolving technology of DNA fingerprinting and its application to fisheries and aquaculture. Journal of Fish Biology 47, 29-55.
33. Ota T. (1993) DISPAN: Genetic Distance and Phylogenetic Analysis. Penn. State University, University Park, PA, USA.
34. Pouyaud L. & Agnese J.F. (1995) Phylogenetic relationships between 21 species of three tilapiine genera Tilapia, Sarotherodon and Oreochromis using allozyme data. Journal of Fish Biology 47, 26-38.
35. Pullin R.S.V. & Capilli J.B. (1988) Genetic improvement of tilapia: problems and prospects. In: The Second International Symposium on Tilapia in Aquaculture, ICLARM Conference Proceedings 15 (ed. by R.S.V. Pullin, T. Bhukaswan, T. Tonguthai & J.L. MacClean), pp. 259-266. ICLARM, Manila, Philippines.
36. Raymond M. & Rouset F. (1995) GENEPOP: population genetics software for exact tests and ecumenism, Ver.1.2. Journal of Heredity 86, 248-249.
37. Rognon X. & Guyomard R. (1997) Mitochondrial DNA differentiation among East and West African Nile tilapia populations. Journal of Fish Biology 50, 204-207.
38. Rognon X., Andriamanga M., McAndrew B. & Guyomard R. (1996) Allozyme variation in natural and cultured populations in two tilapia species: Oreochromis niloticus and Tilapia zillii. Heredity 76, 640-650.
39. Romana-Eguia M.R.R., Iked M., Basiao Z.U. & Taniguchi N. (2004) Genetic diversity in farmed Asian Nile and red hybrid tilapia stocks evaluated fro microsatellite and mitochondrial DNA analysis. Aquaculture 236, 131-150.
40. Rutten M.J., Komen H., Deerenberg R.M., Siwek M. & Bovenhuis H. (2004) Genetic characterization of four strians of Nile tilapia (Oreocromis niloticus L.) using microsatellite markers. Animal Genetics 35, 93-97.
41. Ryman N. & Laikre L. (1991) Effects of supportive breeding on the genetically effective population size. Conservation Biology 3, 325-329.
42. Shaklee J.B., Tamaru C.S. & Waples R.S. (1982) Speciationand evolution of marine fishes studies by electrophoretic analysis of proteins. Pacific Science 36, 141-157.
43. Stepien C. (1995) Population genetic divergence and geographic patterns from DNA sequences: examples from marine and freshwater fishes. American Fisheries Society Symposium 17, 263-287.
44. Thorpe J.P. & Sol-Cava A.M. (1994) The use of allozyme electrophoresis in vertebrate systematics. Zoologica Scripta 23, 3-18.
45. Wahlund S. (1928) Zusammensetzung von Populationen und Korrelationsers-chinungen von Standpunkt der Vererbungslehre aus betrachtet. Hereditas 11, 65-108.
46. Wirgin I.I. & Waldman J.R. (1994) What DNA can do for you. Fisheries 19, 16-27.
47. Xu J.H., Primavera L.D., De la Pena P., Pettit J., Belak & Alcivar-Warren A. (2001) Genetic diversity of wild and cultured Black Tiger Shrimp Penaeus monodon in the Philippines using microsatellites. Aquaculture 199, 13-40.
48. Yeh F.C., Yang R.C. & Boyle T. (1999) POPGENE version 1.3.1. Microsoft Window-bases Freeware for Population Genetic Analysis. Available: www.ualberta.ca/fyeh/. University of Alberta and the Centre for International Forestry Research, Alberta, Canada.