Photoreceptor for curling behavior in Peranema trichophorum and evolution of eukaryotic rhodopsins

Eukaryotic Cell

Volumn 4, Issue 10, 2005, Pages 1605-1612

  Saranak, Jureepan ^a   Foster, Kenneth W ^a  

^a SYRACUSE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CALCIMYCIN; CALCIUM; CHELATING AGENT; EGTAZIC ACID; HEXOBARBITAL; IONOPHORE; PROTOZOAL PROTEIN; RHODOPSIN;

ANIMAL; ANIMAL BEHAVIOR; ARTICLE; CHEMISTRY; DRUG EFFECT; EUGLENA; GENETICS; HISTOLOGY; LIGHT; METABOLISM; MOLECULAR EVOLUTION; PHOTORECEPTOR; PHYSIOLOGY;

ANIMALS; BEHAVIOR, ANIMAL; CALCIMYCIN; CALCIUM; CHELATING AGENTS; EGTAZIC ACID; EUGLENIDA; EVOLUTION, MOLECULAR; HEXOBARBITAL; IONOPHORES; LIGHT; PHOTORECEPTORS, INVERTEBRATE; PROTOZOAN PROTEINS; RHODOPSIN;

ANIMALIA; ARCHAEA; CHLOROPHYTA; CRYPTOPHYTA; DINOPHYCEAE; EUGLENOZOA; EUKARYOTA; FUNGI; HALOBACTERIUM; PERANEMA (EUGLENID); PERANEMA TRICHOPHORUM;

EID: 26944474380     PISSN: 15359778     EISSN: None     Source Type: Journal    
DOI: 10.1128/EC.4.10.1605-1612.2005     Document Type: Article

References (44)

1. Allen, J. R., J. J. Lee, S. H. Hutner, and J. Storm. 1966. Prolonged culture of the voracious flagellate Peranema in antioxidant-containing media. Protozoology 13:103-108.
2. Baehr, W., and K. Palczewski. 2002. Photoreceptors and calcium, p. 632. Springer, Berlin, Germany.
3. Bieszke, J. A., E. L. Braun, L. E. Bean, S. Kang, D. O. Natvig, and K. A. Borkovich. 1999. The nop-1 gene of Neurospora crassa encodes a seven transmembrane helix retinal-binding protein homologous to archaeal rhodopsins. Proc. Natl. Acad. Sci. USA 96:8034-8039.
4. Cavalier-Smith, T. 1981. Eukaryote kingdoms: seven or nine? BioSystems 14:461-481.
5. Cavalier-Smith, T. 1986. Cilia versus undulipodia. Bioscience 36:293.
6. Cavalier-Smith, T. 2004. Only six kingdoms of life. Proc. R. Soc. London Ser. B 271:1251-1262.
7. Douzery, E. J. P., E. A. Snell, E. Bapteste, F. Delsuc, and H. Philippe. 2004. The timing of eukaryotic evolution: does a relaxed molecular clock reconcile proteins and fossils? Proc. Natl. Acad. Sci. USA 101:15386-15391.
8. Ehrenberg, C. G. 1838. Die infusionsthierchen als vollkommene Organismen. Verlag von Leopold Voss, Leipzig, Germany.
9. Erata, M., M. Kubota, T. Takahashi, I. Inouye, and M. Watanabe. 1995. Ultrastructure and phototactic action spectra of two genera of cryptophyte flagellate algae, Cryptomonas and Chroomonas. Protoplasma 188:258-266.
10. Fan, G., F. Siebert, M. Sheves, and R. Vogel. 2002. Rhodopsin with 11-cis locked chromophore is capable of forming an active state photoproduct. J. Biol. Chem. 277:40229-40234.
11. Forward, R. B., Jr. 1974. Phototaxis by the dinoflagellate Gymnodinium splendens Lebour. J. Protozool. 21:312-315.
12. Foster, K. W. 2001. Action spectroscopy of photomovement, p. 51-115. In D.-P. Häder and M. Lebert (ed.), Photomovement. Comprehensive series in the photosciences, vol. 1. Elsevier, Amsterdam, The Netherlands.
13. Foster, K. W., J. Saranak, F. Derguini, R. V. Jayathirtha, G. R. Zarrilli, M. Okabe, J.-M. Fang, N. Shimizu, and K. Nakanishi. 1988. Rhodopsin activation: a novel view suggested by in vivo Chlamydomonas experiments. J. Am. Chem. Soc. 110:6588-6589.
14. Foster, K. W., J. Saranak, F. Derguini, G. R. Zarrilli, R. Johnson, M. Okabe, and K. Nakanishi. 1989. Activation of Chlamydomonas rhodopsin in vivo does not require isomerization of retinal. Biochemistry 28:819-824.
15. Foster, K. W., J. Saranak, and P. A. Dowben. 1991. Spectral sensitivity, structure, and activation of eukaryotic rhodopsins: activation spectroscopy of rhodopsin analogs in Chlamydomonas. J. Photochem. Photobiol. B 8:385-408.
16. Foster, K. W., J. Saranak, N. Patel, G. Zarrilli, M. Okabe, T. Kline, and K. Nakanishi. 1984. A rhodopsin is the functioning photoreceptor for phototaxis in the unicellular eukaryote Chlamydomonas. Nature 311:756-759.
17. Foster, K. W., J. Saranak, and G. Zarrilli. 1988. Autoregulation of rhodopsin synthesis in Chlamydomonas reinhardtii. Proc. Natl. Acad. Sci. USA 85:6379-6383.
18. Foster, K. W., and R. D. Smyth. 1980. Light antennas in phototactic algae. Microbiol. Rev. 44:572-630.
19. Hegemann, P., W. Gärtner, and R. Uhl. 1991. All-trans retinal constitutes the functional chromophore in Chlamydomonas rhodopsin. Biophys. J. 60:1477-1489.
20. Hegemann, P., M. Fuhrmann, and S. Kateriya. 2001. Sensory algal photoreceptors. J. Phycol. 37:6668-6676.
21. Iseki, M., S. Matsunaga, A. Murakami, K. Ohno, K. Shiga, K. Yoshida, M. Sugai, T. Takahashi, T. Hori, and M. Watanabe. 2002. A blue-light-activated adenylyl cyclase mediates photoavoidance in Euglena gracilis. Nature 415:1047-1051.
22. Jung, K.-H., and J. L. Spudich. 2004. Microbial rhodopsins: transport and sensory proteins throughout the three domains of life, p. 1-12. In W. M. Horspool et al. (ed.), CRC handbook of organic photochemistry and photobiology. CRC Press, Boca Raton, Fla.
23. Kuksa, V., F. Bartl, T. Maeda, G.-F. Jang, E. Ritter, M. Heck, J. P. Van Hooser, Y. Liang, S. Filipek, M. H. Gelb, K. P. Hofmann, and K. Palczewski. 2002. Biochemical and physiological properties of rhodopsin regenerated with 11-cis-6-ring and -7-ring retinals. J. Biol. Chem. 277:42315-42324.
24. Manton, I. 1965. Some phyletic implications of flagellar structure in plants. Adv. Bot. Res. 2:1-34.
25. Marangoni, R., S. Puntoni, L. Favati, and G. Colombetti. 1994. Phototaxis in Fabrea salina. I. Action spectrum determination. J. Photochem. Photobiol. B 23:149-154.
26. Mitchell, D. R. 2004. Speculations on the evolution of 9+2 organelles and the role of central pair microtubules. Biol. Cell 96:691-696.
27. Nagel, G., T. Szellas, W. Huhn, S. Kateriya, N. Adeishvili, P. Berthold, D. Ollig, P. Hegemann, and E. Bamberg. 2003. Channelrhodopsin-2, a directly light-gated cation-selective membrane channel. Proc. Natl. Acad. Sci. USA 100:13940-13945.
28. Nakamura, Y., T. Kaneko, S. Sato, M. Mimuro, H. Miyashita, T. Tsuchiya, S. Sasamoto, A. Watanabe, K. Kawashima, Y. Kishida, C. Kiyokawa, M. Kohara, M. Matsumoto, A. Matsuno, N. Nakazaki, S. Shimpo, C. Takeuchi, M. Yamada, and S. Tabata. 2003. Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids. DNA Res. 10(Suppl.):181-201.
29. Nakanishi, K., F. Derguini, V. J. Rao, G. Zarrilli, M. Okabe, T. Lien, R. Johnson, K. W. Foster, and J. Saranak. 1989. Theory of rhodopsin activation: probable charge redistribution of excited state chromophore. Pure Appl. Chem. 61:361-364.
30. Okamoto, O. K., and J. W. Hastings. 2003. Novel dinoflagellate clock-related genes identified through microarray analysis. J. Phycol. 39:519-526.
31. Rousso, I., E. Khachatryan, Y. Gat, I. Brodsky, M. Ottolenghi, M. Sheves, and A. Lewis. 1997. Microsecond atomic force sensing of protein conformational dynamics: implications for the primary light-induced events in bacteriorhodopsin. Proc. Natl. Acad. Sci. USA 94:7937-7941.
32. Saito, A., Y. Suetomo, M. Arikawa, G. Omura, S. M. M. K. Khan, S. Kakuta, E. Suzaki, K. Kataoka, and T. Suzaki. 2003. Gliding movement in Peranema tricophorum is powered by flagellar surface motility. Cell Motil. Cytoskel. 55:244-253.
33. Saranak, J., and K. W. Foster. 1994. The in vivo cleavage of carotenoids into retinoids in Chlamydomonas reinhardtii. J. Exp. Bot. 45:505-511.
34. Saranak, J., and K. W. Foster. 1997. Rhodopsin guides fungal phototaxis. Nature 387:465-466.
35. Shettles, L. B. 1937. The response to light in Peranema trichophorum with special reference to dark-adaptation and light-adaptation. J. Exp. Zool. 77:215-249.
36. Shettles, L. B. 1938. Effect of ultraviolet light and X-rays on Peranema trichophorum. J. Cell Comp. Physiol. 12:263-272.
37. Shettles, L. B. 1939. The relation between salts, hydrogen-ion concentration and sensitivity to light in Peranema trichophorum. J. Exp. Zool. 81:473-477.
38. Sineshchekov, O. A., K. H. Jung, and J. L. Spudich. 2002. Two rhodopsins mediate phototaxis to low- and high-intensity light in Chlamydomonas reinhardtii. Proc. Natl. Acad. Sci. USA 99:8689-8694.
39. Stechmann, A., and T. Cavalier-Smith. 2002. Rooting the eukaryote tree by using a derived gene fusion. Science 297:89-91.
40. Teller, D. C., T. Okada, C. A. Behnke, K. Palczewski, and R. E. Stenkamp. 2001. Advances in determination of a high-resolution three-dimensional structure of rhodopsin, a model of G-protein-coupled receptors (GPCRs). Biochemistry 40:7761-7772.
41. Triemer, R. E. 1997. Feeding in Peranema trichophorum revisited. J. Phycol. 33:649-654.
42. Waschuk, S. A., A. G. Bezerra, Jr., L. Shi, and L. S. Brown. 2005. Leptosphaeria rhodopsin: bacteriorhodopsin-like proton pump from a eukaryote. Proc. Natl. Acad. Sci. USA 102:6879-6883.
43. Williams, T. P., A. Squitieri, R. P. Henderson, and J. P. P. Webbers. 1999. Reciprocity between light intensity and rhodopsin concentration across the rat retina. J. Physiol. (London) 516:869-874.
44. Zadok, U., A. Khatchatouriants, A. Lewis, M. Ottolenghi, and M. Sheves. 2002. Light-induced charge redistribution in the retinal chromophore is required for initiating the bacteriorhodopsin photocycle. J. Am. Chem. Soc. 124:11844-11845.