메뉴 건너뛰기




Volumn 45, Issue 5, 2005, Pages 1282-1290

Structure-based approaches to improve selectivity: CDK2-GSK3β binding site analysis

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; CRYSTAL STRUCTURE; MUTAGENESIS; PROTEINS; VISUALIZATION;

EID: 26944452838     PISSN: 15499596     EISSN: 1549960X     Source Type: Journal    
DOI: 10.1021/ci0500280     Document Type: Article
Times cited : (46)

References (29)
  • 1
    • 5044236233 scopus 로고    scopus 로고
    • Sequence and structural analysis of kinase ATP pocket residues
    • Vulpetti, A.; Bosotti, R. Sequence and structural analysis of kinase ATP pocket residues. Farmaco 2004, 59, 759-765.
    • (2004) Farmaco , vol.59 , pp. 759-765
    • Vulpetti, A.1    Bosotti, R.2
  • 2
    • 0142231577 scopus 로고    scopus 로고
    • Structural basis for UCN-01 (7-hydroxystaurosporine) specificity and PDK1 (3-phosphoinositide-dependent protein kinase-1) inhibition
    • Komander, D.; Kular, G. S.; Bain, J.; Elliott, M.; Alessi, D. R.; Van Aalten, D. M. Structural basis for UCN-01 (7-hydroxystaurosporine) specificity and PDK1 (3-phosphoinositide-dependent protein kinase-1) inhibition. Biochem J. 2003, 375, 255-262.
    • (2003) Biochem J. , vol.375 , pp. 255-262
    • Komander, D.1    Kular, G.S.2    Bain, J.3    Elliott, M.4    Alessi, D.R.5    Van Aalten, D.M.6
  • 4
    • 0037041470 scopus 로고    scopus 로고
    • Shaggy/GSK3 antagonizes hedgehog signaling by regulating Cubitus interruptus
    • Jia, J.; Amanai, K.; Wang, G.; Tangs, J.; Wang, B.; Jiang, J. Shaggy/GSK3 antagonizes hedgehog signaling by regulating Cubitus interruptus. Nature 2002, 416, 548-552.
    • (2002) Nature , vol.416 , pp. 548-552
    • Jia, J.1    Amanai, K.2    Wang, G.3    Tangs, J.4    Wang, B.5    Jiang, J.6
  • 7
    • 0037142342 scopus 로고    scopus 로고
    • Structural differences of matrix metalloproteinases with potential implications for inhibitor selectivity examined by the GRID/CPCA approach
    • Terp, G. E.; Cruciani, G.; Christensen, I. T.; Jorgensen, F. S. Structural Differences of Matrix Metalloproteinases with Potential Implications for Inhibitor Selectivity Examined by the GRID/CPCA Approach. J. Med. Chem. 2002, 45, 2675-2684.
    • (2002) J. Med. Chem. , vol.45 , pp. 2675-2684
    • Terp, G.E.1    Cruciani, G.2    Christensen, I.T.3    Jorgensen, F.S.4
  • 8
    • 0035935677 scopus 로고    scopus 로고
    • Analysis of selective regions in the active sites of human cytochromes P450, 2C8, 2C9, 2C18, and 2C19 homology models using GRID/CPCA
    • Ridderstrom, M.; Zamora, I.; Fjellstrom, O.; Andersson, T. B. Analysis of selective regions in the active sites of human cytochromes P450, 2C8, 2C9, 2C18, and 2C19 homology models using GRID/CPCA. J. Med. Chem. 2001, 44, 4072-4081.
    • (2001) J. Med. Chem. , vol.44 , pp. 4072-4081
    • Ridderstrom, M.1    Zamora, I.2    Fjellstrom, O.3    Andersson, T.B.4
  • 9
    • 0037030707 scopus 로고    scopus 로고
    • Structural classification of protein kinases using 3D molecular interaction field analysis of their ligand binding sites: Target family landscapes
    • Naumann, T.; Matter, H. Structural classification of protein kinases using 3D molecular interaction field analysis of their ligand binding sites: target family landscapes. J. Med. Chem. 2002, 45, 2366-2378.
    • (2002) J. Med. Chem. , vol.45 , pp. 2366-2378
    • Naumann, T.1    Matter, H.2
  • 10
    • 1842431667 scopus 로고    scopus 로고
    • Peroxisome Proliferator-Activated Receptors target family landscape: A chemometrical approach to ligand selectivity based on protein binding site analysis
    • Pirard, B. Peroxisome Proliferator-Activated Receptors target family landscape: A chemometrical approach to ligand selectivity based on protein binding site analysis. J. Comput.-Aided Mol. Des. 2003, 17, 785-796.
    • (2003) J. Comput.-aided Mol. Des. , vol.17 , pp. 785-796
    • Pirard, B.1
  • 11
    • 0034710718 scopus 로고    scopus 로고
    • GRid-INdependent Descriptors (GRIND): A novel class of alignment-independent three-dimensional molecular descriptors
    • Pastor, M.; Cruciani, G.; McLay, I.; Pickett, S.; Clementi S. GRid-INdependent Descriptors (GRIND): A Novel Class of Alignment-Independent Three-Dimensional Molecular Descriptors. J. Med. Chem. 2000, 43, 3233-3243.
    • (2000) J. Med. Chem. , vol.43 , pp. 3233-3243
    • Pastor, M.1    Cruciani, G.2    McLay, I.3    Pickett, S.4    Clementi, S.5
  • 12
    • 2942604990 scopus 로고    scopus 로고
    • GRIND/ALMOND investigations on CysLTl receptor antagonists of the quinolinyl(bridged)aryl type
    • Benedetti, P.; Mannhold, R.; Cruciani, G.; Ottaviani G. GRIND/ALMOND investigations on CysLTl receptor antagonists of the quinolinyl(bridged)aryl type. Bioorg. Med. Chem. 2004, 12, 3607-3617.
    • (2004) Bioorg. Med. Chem. , vol.12 , pp. 3607-3617
    • Benedetti, P.1    Mannhold, R.2    Cruciani, G.3    Ottaviani, G.4
  • 13
    • 12244310480 scopus 로고    scopus 로고
    • Discriminant and quantitative PLS analysis of competitive CYP2C9 inhibitors versus noninhibitors using alignment independent GRIND descriptors
    • Afzelius, L.; Masimirembwa, C. M.; Karlén, A.; Andersson, T. B.; Zamora, I. Discriminant and quantitative PLS analysis of competitive CYP2C9 inhibitors versus noninhibitors using alignment independent GRIND descriptors. J. Comput.-Aided Mol. Des. 2002, 16, 443-458.
    • (2002) J. Comput.-aided Mol. Des. , vol.16 , pp. 443-458
    • Afzelius, L.1    Masimirembwa, C.M.2    Karlén, A.3    Andersson, T.B.4    Zamora, I.5
  • 14
    • 1542316348 scopus 로고    scopus 로고
    • Novel approaches for modeling of the A1 adenosine receptor and its agonist binding site
    • Gutiérrez-de-Teràn, H.; Centeno, N. B.; Pastor, M.; Sanz, F. Novel approaches for modeling of the A1 adenosine receptor and its agonist binding site. Proteins 2004, 54, 705-715.
    • (2004) Proteins , vol.54 , pp. 705-715
    • Gutiérrez-De-Teràn, H.1    Centeno, N.B.2    Pastor, M.3    Sanz, F.4
  • 15
    • 31044433770 scopus 로고    scopus 로고
    • Molecular Discovery Ltd.: Pinner, Middlesex, U. K.
    • GRID, version 22; Molecular Discovery Ltd.: Pinner, Middlesex, U. K. (www.moldiscovery.com).
    • GRID, Version 22
  • 16
    • 84861257655 scopus 로고    scopus 로고
    • Molecular Discovery Ltd.: Pinner, Middlesex, U. K.
    • GOLPE, version 4.5.12; Molecular Discovery Ltd.: Pinner, Middlesex, U. K. (www.moldiscovery.com).
    • GOLPE, Version 4.5.12
  • 17
    • 33644670339 scopus 로고    scopus 로고
    • Molecular Discovery Ltd.: Pinner, Middlesex, U. K.
    • ALMOND, version 3.2; Molecular Discovery Ltd.: Pinner, Middlesex, U. K. (www.moldiscovery.com).
    • ALMOND, Version 3.2
  • 20
    • 0022419375 scopus 로고
    • Aromatic-aromatic interaction: A mechanism of protein structure stabilization
    • Burley, S. K.; Petsko, G. A. Aromatic-aromatic interaction: a mechanism of protein structure stabilization. Science 1985, 229, 23-28.
    • (1985) Science , vol.229 , pp. 23-28
    • Burley, S.K.1    Petsko, G.A.2
  • 21
    • 11744374008 scopus 로고
    • Dimerization energetics of benzene and aromatic amino acid side chains
    • Burley, S. K.; Petsko, G. A. Dimerization energetics of benzene and aromatic amino acid side chains. J. Am. Chem. Soc. 1986, 108, 7995-8001.
    • (1986) J. Am. Chem. Soc. , vol.108 , pp. 7995-8001
    • Burley, S.K.1    Petsko, G.A.2
  • 22
    • 0342810084 scopus 로고
    • The interaction between phenylalanine rings in proteins
    • Singh, J.; Thornton, J. M. The interaction between phenylalanine rings in proteins. FEBS Lett. 1985, 191, 1-6.
    • (1985) FEBS Lett. , vol.191 , pp. 1-6
    • Singh, J.1    Thornton, J.M.2
  • 26
    • 4444288154 scopus 로고    scopus 로고
    • N - Phenyl-4-pyrazolo[1,5-b]pyridazin-3-ylpyrimidin-2-amines as potent and selective inhibitors of glycogen synthase kinase 3 with good cellular efficacy
    • Tavares, F. X.; Boucheron, J. A.; Dickerson, S. H.; Griffin, R. J.; Preugschat, F.; Thomson, S. A.; Wang, T. Y.; Zhou, H.-Q. N - Phenyl-4-pyrazolo[1,5-b]pyridazin-3-ylpyrimidin-2-amines as Potent and Selective Inhibitors of Glycogen Synthase Kinase 3 with Good Cellular Efficacy. J. Med. Chem. 2004, 47, 4716-4730.
    • (2004) J. Med. Chem. , vol.47 , pp. 4716-4730
    • Tavares, F.X.1    Boucheron, J.A.2    Dickerson, S.H.3    Griffin, R.J.4    Preugschat, F.5    Thomson, S.A.6    Wang, T.Y.7    Zhou, H.-Q.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.