Molecular characterization of hand flora and environmental isolates in a community setting

Journal of Clinical Microbiology

Volumn 43, Issue 10, 2005, Pages 5202-5207

  Pancholi, Preeti ^a,e   Healy, Mimi ^b   Bittner, Tracy ^b   Webb, Renee ^b   Wu, Fan ^a   Aiello, Allison ^c   Larson, Elaine ^d   Della Latta, Phyllis ^a  

^a Department of Medicine   (United States)

^b Spectral Genomics Inc   (United States)

^c UNIVERSITY OF MICHIGAN SCHOOL OF PUBLIC HEALTH   (United States)

^d Columbia University ^*  (United States)

^e University Hospital East   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACINETOBACTER; ADULT; ARTICLE; BACTERIAL COLONIZATION; BACTERIAL FLORA; BACTERIUM ISOLATION; CAREGIVER; COAGULASE NEGATIVE STAPHYLOCOCCUS; ENTEROBACTER; FEMALE; GENOTYPE; GRAM NEGATIVE BACTERIUM; HAND WASHING; HOSPITAL INFECTION; HOUSEHOLD; HUMAN; MAJOR CLINICAL STUDY; MALE; NUCLEIC ACID AMPLIFICATION; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; STRAIN DIFFERENCE;

COAGULASE; DISEASE RESERVOIRS; DNA, BACTERIAL; FAMILY CHARACTERISTICS; GENOTYPE; GRAM-NEGATIVE BACTERIA; HAND; HUMANS; INTERIOR DESIGN AND FURNISHINGS; POLYMERASE CHAIN REACTION; RESIDENCE CHARACTERISTICS; STAPHYLOCOCCUS;

ACINETOBACTER; BACTERIA (MICROORGANISMS); ENTEROBACTER; NEGIBACTERIA; STAPHYLOCOCCI; STAPHYLOCOCCUS;

EID: 26944437037     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.43.10.5202-5207.2005     Document Type: Article

References (37)

1. Aiello, A. E., J. Cimiotti, P. Della-Latta, and E. L. Larson. 2003. A comparison of the bacteria found on the hands of "homemakers" and neonatal intensive care unit nurses. J. Hosp. Infect. 54:310-315.
2. Berlau, J., H. Aucken, H. Malnick, and T. Pitt. 1999. Distribution of Acinetobacter species on skin of healthy humans. Eur. J. Clin. Microbiol. Infect. Dis. 18:179-183.
3. Bou, G., G. Cervero, M. A. Dominguez, C. Quereda, and J. Martinez-Beltran. 2000. PCR-based DNA fingerprinting (REP-PCR, AP-PCR) and pulsed-field gel electrophoresis characterization of a nosocomial outbreak caused by imipenem- and meropenem-resistant Acinetobacter baumannii. Clin. Microbiol. Infect. 6:635-643.
4. Burucoa, C., V. Lhomme, and J. L. Fauchere. 1999. Performance criteria of DNA fingerprinting methods for typing of Helicobacter pylori isolates: experimental results and meta-analysis. J. Clin. Microbiol. 37:4071-4080.
5. Chmielewski, R., A. Wieliczko, M. Kuczkowski, M. Mazurkiewicz, and M. Ugorski. 2002. Comparison of ITS profiling, REP- and ERIC-PCR of Salmonella enteritidis isolates from Poland. J. Vet. Med. B 49:163-168.
6. Dawson, S. L., J. C. Fry, and B. N. Dancer. 2002. A comparative evaluation of five typing techniques for determining the diversity of fluorescent pseudomonads. J. Microbiol. Methods 50:9-22.
7. Dombek, P. E., L. K. Johnson, S. T. Zimmerley, and M. J. Sadowsky. 2000. Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources. Appl. Environ. Microbiol. 66:2572-2577.
8. Dunne, W. M., Jr., K. S. Kehl, C. A. Holland-Staley, A. B. Brueggemann, M. A. Pfaller, and G. V. Doern. 2001. Comparison of results generated by serotyping, pulsed-field restriction analysis, ribotyping, and repetitive-sequence PCR used to characterize penicillin-resistant pneumococci from the United States. J. Clin. Microbiol. 39:1791-1795.
9. Garcia-Garmendia, J. L., C. Ortiz-Leyba, J. Garnacho-Montero, F. J. Jimenez-Jimenez, C. Perez-Paredes, A. E. Barrero-Almodovar, and M. Gili-Miner. 2001. Risk factors for Acinetobacter baumannii nosocomial bacteremia in critically ill patients: a cohort study. Clin. Infect. Dis. 33:939-946.
10. Gunawardana, G. A., K. M. Townsend, and A. J. Frost. 2000. Molecular characterisation of avian Pasteurella multocida isolates from Australia and Vietnam by REP-PCR and PFGE. Vet. Microbiol. 72:97-109.
11. Husni, R. N., L. S. Goldstein, A. C. Arroliga, G. S. Hall, C. Fatica, J. K. Stoller, and S. M. Gordon. 1999. Risk factors for an outbreak of multi-drug-resistant Acinetobacter nosocomial pneumonia among intubated patients. Chest 115:1378-1382.
12. Jawad, A., H. Seifert, A. M. Snelling, J. Heritage, and P. M. Hawkey. 1998. Survival of Acinetobacter baumannii on dry surfaces: comparison of outbreak and sporadic isolates. J. Clin. Microbiol. 36:1938-1941.
13. Jones, R. N., L. Deshpande, T. R. Fritsche, and H. S. Sader. 2004. Determination of epidemic clonality among multidrug-resistant strains of Acinetobacter spp. and Pseudomonas aeruginosa in the MYSTIC Programme (USA, 1999-2003). Diagn. Microbiol. Infect. Dis. 49:211-216.
14. Larson, E. L., C. Gomez-Duarte, L. V. Lee, P. Della-Latta, D. J. Kain, and B. H. Keswick. 2003. Microbial flora of hands of homemakers. Am. J. Infect. Control 31:72-79.
15. Larson, E. L., S. X. Lin, C. Gomez-Pichardo, and P. Della-Latta. 2004. Effect of antibacterial home cleaning and handwashing products on infectious disease symptoms: a randomized, double-blind trial. Ann. Intern. Med. 140: 321-329.
16. Lipman, L. J., A. de Nijs, T. J. Lam, and W. Gaastra. 1995. Identification of Escherichia coli strains from cows with clinical mastitis by serotyping and DNA polymorphism patterns with REP and ERIC primers. Vet. Microbiol. 43:13-19.
17. Liu, P. Y., and W. L. Wu. 1997. Use of different PCR-based DNA finger-printing techniques and pulsed-field gel electrophoresis to investigate the epidemiology of Acinetobacter calcoaceticus-Acinetobacter baumannii complex. Diagn. Microbiol. Infect. Dis. 29:19-28.
18. Liu, P. Y., Y. J. Lau, B. S. Hu, J. M. Shyr, Z. Y. Shi, W. S. Tsai, Y. H. Lin, and C. Y. Tseng. 1995. Analysis of clonal relationships among isolates of Shigella sonnei by different molecular typing methods. J. Clin. Microbiol. 33:1779-1783.
19. Liu, P. Y., Y. J. Lau, B. S. Hu, J. M. Shyr, Z. Y. Shi, W. S. Tsai, Y. H. Lin, and C. Y. Tseng. 1995. Comparison of different PCR approaches for characterization of Burkholderia (Pseudomonas) cepacia isolates. J. Clin. Microbiol. 33:3304-3307.
20. Malathum K., K. V. Singh, G. M. Weinstock, and B. E. Murray. 1998. Repetitive sequence-based PCR versus pulsed-field gel electrophoresis for typing of Enterococcus faecalis at the subspecies level. J. Clin. Microbiol. 36:211-215.
21. Mammeri, H., G. Laurans, M. Eveillard, S. Castelain, and F. Eb. 2001. Coexistence of SHV-4- and TEM-24-producing Enterobacter aerogenes strains before a large outbreak of TEM-24-producing strains in a French hospital. J. Clin. Microbiol. 39:2184-2190.
22. Marty, N. 1997. Epidemiological typing of Stenotrophomonas maltophilia. J. Hosp. Infect. 36:261-266.
23. Matsumoto, M., Y. Suzuki, Y. Miyazaki, D. Tanaka, T. Yasuoka, K. Mashiko, R. Ishikita, and J. Baba. 2001. Enterobacterial repetitive intergenic consensus sequence-based PCR (ERIC-PCR); its ability to differentiate Streptococcus pyogenes strains and applicability to the study of outbreaks of streptococcal infection. J. Exp. Med. 194:205-212.
24. Naimi, T. S., K. H. LeDell, D. J. Boxrud, A. V. Groom, C. D. Steward, S. K. Johnson, J. M. Besser, C. O'Boyle, R. N. Danila, J. E. Cheek, M. T. Osterholm, K. A. Moore, and K. E. Smith. 2001. Epidemiology and clonality of community-acquired methicillin-resistant Staphylococcus aureus in Minnesota, 1996-1998. Clin. Infect. Dis. 33:990-996.
25. Naimi, T. S., K. H. LeDell, K. Como-Sabetti, S. M. Borchardt, D. J. Boxrud, J. Etienne, S. K. Johnson, F. Vandenesch, S. Fridkin, C. O'Boyle, R. N. Danila, and R. Lynfield. 2003. Comparison of community- and health care-associated methicillin-resistant Staphylococcus aureus infection. JAMA 290: 2976-2984.
26. Olive, D. M., and P. Bean. 1999. Principles and applications of methods for DNA-based typing of microbial organisms. J. Clin. Microbiol. 37:1661-1669.
27. Presterl, E., R. Nadrchal, S. Winkler, A. Makristathis, W. Koller, M. L. Rotter, and A. M. Hirschl. 1997. Molecular typing of Acinetobacter baumannii from ten different intensive care units of a university hospital. Eur. J. Clin. Microbiol. Infect. Dis. 16:740-743.
28. Saiman, L., M. O'Keefe, P. L. Graham III, F. Wu, B. Said-Salim, B. Kreiswirth, A. LaSala, P. M. Schlievert, and P. Della-Latta. 2003. Hospital transmission of community-acquired methicillin-resistant Staphylococcus aureus among postpartum women. Clin. Infect. Dis. 37:1313-1319.
29. Sander, A., M. Ruess, S. Bereswill, M. Schuppler, and B. Steinbrueckner. 1998. Comparison of different DNA fingerprinting techniques for molecular typing of Bartonella henselae isolates. J. Clin. Microbiol. 36:2973-2981.
30. Spigaglia, P., and P. Mastrantonio. 2003. Evaluation of repetitive element sequence-based PCR as a molecular typing method for Clostridium difficile. J. Clin. Microbiol. 41:2454-2457.
31. Stern, M. J., G. F. Ames, N. H. Smith, E. C. Robinson, and C. F. Higgins. 1984. Repetitive extragenic palindromic sequences: a major component of the bacterial genome. Cell 37:1015-1026.
32. van der Zee, A., H. Verbakel, J. C. van Zon, I. Frenay, A. van Belkum, M. Peeters, A. Buiting, and A. Bergmans. 1999. Molecular genotyping of Staphylococcus aureus strains: comparison of repetitive element sequence-based PCR with various typing methods and isolation of a novel epidemicity marker. J. Clin. Microbiol. 37:342-349.
33. Ventura, M., and R. Zink. 2002. Specific identification and molecular typing analysis of Lactobacillus johnsonii by using PCR-based methods and pulsed-field gel electrophoresis. FEMS Microbiol. Lett. 217:141-154.
34. Wong, H. C., and C. H. Lin. 2001. Evaluation of typing of Vibrio parahae-molyticus by three PCR methods using specific primers. J. Clin. Microbiol. 39:4233-4240.
35. Wu, F., and P. Della-Latta. 2002. Molecular typing strategies. Semin. Perinatol. 26:357-366.
36. Zarrilli, R., M. Crispino, M. Bagattini, E. Barretta, A. Di Popolo, M. Triassi, and P. Villari. 2004. Molecular epidemiology of sequential outbreaks of Acinetobacter baumanmi in an intensive care unit shows the emergence of carbapenem resistance. J. Clin. Microbiol. 42:946-953.
37. Zeana, C., E. Larson, J. Sahni, S. J. Bayuga, F. Wu, and P. Della-Latta. 2003. The epidemiology of multidrug-resistant Acinetobacter baumannii: does the community represent a reservoir? Infect. Control Hosp. Epidemiol. 24:275-279.