-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0004270170
-
-
Wiley and Sons, New York, N.Y.
-
Ausubel, F. A., R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl. 1998. Current protocols in molecular biology. Wiley and Sons, New York, N.Y.
-
(1998)
Current Protocols in Molecular Biology
-
-
Ausubel, F.A.1
Brent, R.2
Kingston, R.E.3
Moore, D.D.4
Seidman, J.G.5
Smith, J.A.6
Struhl, K.7
-
3
-
-
0025751624
-
An improved Tn7-based system for the single-copy insertion of cloned genes into chromosomes of gram-negative bacteria
-
Bao, Y., D. P. Lies, H. Fu, and G. P. Roberts. 1991. An improved Tn7-based system for the single-copy insertion of cloned genes into chromosomes of gram-negative bacteria. Gene 109:167-168.
-
(1991)
Gene
, vol.109
, pp. 167-168
-
-
Bao, Y.1
Lies, D.P.2
Fu, H.3
Roberts, G.P.4
-
4
-
-
0037133580
-
Complex pattern of Mycobacterium marinum gene expression during long-term granulomatous infection
-
Chan, K., T. Knaak, L. Satkamp, O. Humbert, S. Falkow, and L. Ramakrishnan. 2002. Complex pattern of Mycobacterium marinum gene expression during long-term granulomatous infection. Proc. Natl. Acad. Sci. USA 99:3920-3925.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 3920-3925
-
-
Chan, K.1
Knaak, T.2
Satkamp, L.3
Humbert, O.4
Falkow, S.5
Ramakrishnan, L.6
-
5
-
-
13844322092
-
Expression and activity of a Xenorhabdus nematophila haemolysin required for full virulence towards Manduca sexta insects
-
Cowles, K. N., and H. Goodrich-Blair. 2005. Expression and activity of a Xenorhabdus nematophila haemolysin required for full virulence towards Manduca sexta insects. Cell. Microbiol. 7:209-219.
-
(2005)
Cell. Microbiol.
, vol.7
, pp. 209-219
-
-
Cowles, K.N.1
Goodrich-Blair, H.2
-
6
-
-
0025731276
-
The association of thymidine kinase activity and thymidine transport in Escherichia coll
-
Dube, D. K., M. S. Z. Horwitz, and L. A. Loeb. 1991. The association of thymidine kinase activity and thymidine transport in Escherichia coll. Gene 99:25-29.
-
(1991)
Gene
, vol.99
, pp. 25-29
-
-
Dube, D.K.1
Horwitz, M.S.Z.2
Loeb, L.A.3
-
7
-
-
0011736531
-
Mutants of Salmonella typhimuriurn that cannot survive within the macrophage are avirulent
-
Fields, P. I., R. V. Swanson, C. G. Haidaris, and F. Heffron. 1986. Mutants of Salmonella typhimuriurn that cannot survive within the macrophage are avirulent. Proc. Natl. Acad. Sci. USA 83:5189-5193.
-
(1986)
Proc. Natl. Acad. Sci. USA
, vol.83
, pp. 5189-5193
-
-
Fields, P.I.1
Swanson, R.V.2
Haidaris, C.G.3
Heffron, F.4
-
8
-
-
0003086394
-
Bacteria-nematode symbioses
-
R. Gaugler (ed.) . CABI Publishing, Wallingford, United Kingdom
-
Forst, S., and D. Clarke. 2002. Bacteria-nematode symbioses, p. 57-77. In R. Gaugler (ed.), Entomopathogenic nematology. CABI Publishing, Wallingford, United Kingdom.
-
(2002)
Entomopathogenic Nematology
, pp. 57-77
-
-
Forst, S.1
Clarke, D.2
-
9
-
-
0031018206
-
Role of the histidine kinase, EnvZ, in the production of outer membrane proteins in the symbiotic-pathogenic bacterium Xenorhabdus nematophilus
-
Forst, S. A., and N. Tabatabai. 1997. Role of the histidine kinase, EnvZ, in the production of outer membrane proteins in the symbiotic-pathogenic bacterium Xenorhabdus nematophilus. Appl. Environ. Microbiol. 63:962-968.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 962-968
-
-
Forst, S.A.1
Tabatabai, N.2
-
10
-
-
0033989675
-
flhDC, the flagellar master operon of Xenorhabdus nematophilus: Requirement for motility, lipolysis, extracellular hemolysis and full virulence
-
Givaudan, A., and A. Lanois. 2000. flhDC, the flagellar master operon of Xenorhabdus nematophilus: requirement for motility, lipolysis, extracellular hemolysis and full virulence. J. Bacteriol. 182:107-115.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 107-115
-
-
Givaudan, A.1
Lanois, A.2
-
11
-
-
72949125511
-
The enzymatic synthesis of thymidine-linked sugars. II. Thymidine diphosphate L-rhamnose
-
Glaser, L., and S. Kornfeld. 1961. The enzymatic synthesis of thymidine-linked sugars. II. Thymidine diphosphate L-rhamnose. J. Biol. Chem. 236:1795-1799.
-
(1961)
J. Biol. Chem.
, vol.236
, pp. 1795-1799
-
-
Glaser, L.1
Kornfeld, S.2
-
12
-
-
0036062747
-
Vibrio cholerae CytR is a repressor of biofilm development
-
Haugo, A. J., and P. I. Watnick. 2002. Vibrio cholerae CytR is a repressor of biofilm development. Mol. Microbiol. 45:471-483.
-
(2002)
Mol. Microbiol.
, vol.45
, pp. 471-483
-
-
Haugo, A.J.1
Watnick, P.I.2
-
13
-
-
0014214139
-
A deoxythymidine kinase-deficient mutant of Escherichia coli. I. Isolation and some properties
-
Hiraga, S., K. Igarashi, and T. Yura. 1967. A deoxythymidine kinase-deficient mutant of Escherichia coli. I. Isolation and some properties. Biochim. Biophys. Acta 145:41-51.
-
(1967)
Biochim. Biophys. Acta
, vol.145
, pp. 41-51
-
-
Hiraga, S.1
Igarashi, K.2
Yura, T.3
-
14
-
-
0000071066
-
Dissimilatory pathways for sugars, polyols, and carboxylates
-
F. C. Neidhardt, J. L. Ingraham, B. Magasanik, M. Schaechter, and H. E. Umbarger (ed.) . American Society for Microbiology, Washington, D.C.
-
Lin, E. C. C. 1996. Dissimilatory pathways for sugars, polyols, and carboxylates. In F. C. Neidhardt, J. L. Ingraham, B. Magasanik, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella typhimurium: cellular and molecular biology. American Society for Microbiology, Washington, D.C.
-
(1996)
Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology
-
-
Lin, E.C.C.1
-
15
-
-
0027497926
-
Selection of bacterial virulence genes that are specifically induced in host tissues
-
Mahan, M. J., J. M. Slauch, and J. J. Mekalanos. 1993. Selection of bacterial virulence genes that are specifically induced in host tissues. Science 259:686-688.
-
(1993)
Science
, vol.259
, pp. 686-688
-
-
Mahan, M.J.1
Slauch, J.M.2
Mekalanos, J.J.3
-
16
-
-
0037509967
-
Early colonization events in the mutualistic association between Steinernema carpocapsae nematodes and Xenorhabdus nematophila bacteria
-
Martens, E. C., K. Heungens, and H. Goodrich-Blair. 2003. Early colonization events in the mutualistic association between Steinernema carpocapsae nematodes and Xenorhabdus nematophila bacteria. J. Bacteriol. 185:3147-3154.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 3147-3154
-
-
Martens, E.C.1
Heungens, K.2
Goodrich-Blair, H.3
-
17
-
-
26244441206
-
Investigating mutualism between entomopathogenic bacteria and nematodes
-
Martens, E. C., E. I. Vivas, K. Heungens, C. E. Cowles, and H. Goodrich-Blair. 2004. Investigating mutualism between entomopathogenic bacteria and nematodes. Nematol. Monogr. Perspect. 2:447-462.
-
(2004)
Nematol. Monogr. Perspect.
, vol.2
, pp. 447-462
-
-
Martens, E.C.1
Vivas, E.I.2
Heungens, K.3
Cowles, C.E.4
Goodrich-Blair, H.5
-
18
-
-
26244437467
-
Analysis of Xenorhabdus nematophila metabolic mutants yields insights into stages of Steinernema carpocapsae nematode intestinal colonization
-
10.1111/j.1365-2958.2005.04742.X
-
17a.Martens, E. C., F. M. Russell, and H. Goodrich-Blair. 2005. Analysis of Xenorhabdus nematophila metabolic mutants yields insights into stages of Steinernema carpocapsae nematode intestinal colonization. Mol. Microbiol. 10.1111/j.1365-2958.2005.04742.X.
-
(2005)
Mol. Microbiol.
-
-
Martens, E.C.1
Russell, F.M.2
Goodrich-Blair, H.3
-
19
-
-
0000992903
-
One-carbon metabolism
-
F. C. Neidhardt, J. L. Ingraham, B. Magasanik, M. Schaechter, and H. E. Umbarger (ed.) . American Society for Microbiology, Washington, D.C.
-
Matthews, R. G. 1996. One-carbon metabolism. In F. C. Neidhardt, J. L. Ingraham, B. Magasanik, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella typhimurium: cellular and molecular biology. American Society for Microbiology, Washington, D.C.
-
(1996)
Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology
-
-
Matthews, R.G.1
-
20
-
-
0142104409
-
Population dynamics of Vibrio fischeri during infection of Euprymna scolopes
-
McCann, J., E. V. Stabb, D. S. Millikan, and E. G. Ruby. 2003. Population dynamics of Vibrio fischeri during infection of Euprymna scolopes. Appl. Environ. Microbiol. 69:5928-5934.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 5928-5934
-
-
McCann, J.1
Stabb, E.V.2
Millikan, D.S.3
Ruby, E.G.4
-
21
-
-
0003785155
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Miller, J. H. 1972. Experiments in molecular genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1972)
Experiments in Molecular Genetics
-
-
Miller, J.H.1
-
22
-
-
0023892552
-
A novel suicide vector and its use in construction of insertion mutations: Osmoregulation of outer membrane proteins and virulence determinants in Vibrio cholerae requires toxR
-
Miller, V. L., and J. J. Mekalanos. 1988. A novel suicide vector and its use in construction of insertion mutations: osmoregulation of outer membrane proteins and virulence determinants in Vibrio cholerae requires toxR. J. Bacteriol. 170:2575-2583.
-
(1988)
J. Bacteriol.
, vol.170
, pp. 2575-2583
-
-
Miller, V.L.1
Mekalanos, J.J.2
-
23
-
-
0037016698
-
Catabolism of pyrimidine nucleotides in the deep-sea tube worm Riftia pachyptila
-
Minic, Z., S. Pastra-Landis, F. Gaill, and G. Hervé. 2002. Catabolism of pyrimidine nucleotides in the deep-sea tube worm Riftia pachyptila. J. Biol. Chem. 277:127-134.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 127-134
-
-
Minic, Z.1
Pastra-Landis, S.2
Gaill, F.3
Hervé, G.4
-
24
-
-
0035968249
-
Contribution of the bacterial endosymbiont to the biosynthesis of pyrimidine nucleotides in the deep-sea tube worm Riftia pachyptila
-
Minic, Z., V. Simon, B. Penverne, F. Gaill, and G. Hervé. 2001. Contribution of the bacterial endosymbiont to the biosynthesis of pyrimidine nucleotides in the deep-sea tube worm Riftia pachyptila. J. Biol. Chem. 276:23777-23784.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 23777-23784
-
-
Minic, Z.1
Simon, V.2
Penverne, B.3
Gaill, F.4
Hervé, G.5
-
25
-
-
0001015633
-
Purines and pyrimidines
-
F. C. Neidhardt, J. L. Ingraham, B. Magasanik, M. Schaechter, and H. E. Umbarger (ed.) . American Society for Microbiology, Washington, D.C.
-
Neuhard, J., and P. Nygaard. 1987. Purines and pyrimidines. In F. C. Neidhardt, J. L. Ingraham, B. Magasanik, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella typhimurium: cellular and molecular biology. American Society for Microbiology, Washington, D.C.
-
(1987)
Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology
-
-
Neuhard, J.1
Nygaard, P.2
-
26
-
-
0019469231
-
Nucleotide sequence of the kanamycin resistance transposon Tn903
-
Oka, A., H. Sugisaki, and M. Takanami. 1981. Nucleotide sequence of the kanamycin resistance transposon Tn903. J. Mol. Biol. 147:217-226.
-
(1981)
J. Mol. Biol.
, vol.147
, pp. 217-226
-
-
Oka, A.1
Sugisaki, H.2
Takanami, M.3
-
28
-
-
4644362959
-
Identification and functional characterization of a Xenorhabdus nematophila oligopeptide permeasc
-
Orchard, S. S., and H. Goodrich-Blair. 2004. Identification and functional characterization of a Xenorhabdus nematophila oligopeptide permeasc. Appl. Environ. Microbiol. 70:5621-5627.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 5621-5627
-
-
Orchard, S.S.1
Goodrich-Blair, H.2
-
29
-
-
0032845341
-
NMR spectroscopic studies on the haemolymph of the tobacco hornworm, Manduca sexta: Assignment of 1H and 13C NMR spectra
-
Phalaraksh, C., E. M. Lenz, J. C. Lindon, J. K. Nicholson, R. D. Farrant, S. E. Reynolds, I. D. Wilson, D. Osborn, and J. M. Weeks. 1999. NMR spectroscopic studies on the haemolymph of the tobacco hornworm, Manduca sexta: assignment of 1H and 13C NMR spectra. Insect Biochem. Mol. Biol. 29:795-805.
-
(1999)
Insect Biochem. Mol. Biol.
, vol.29
, pp. 795-805
-
-
Phalaraksh, C.1
Lenz, E.M.2
Lindon, J.C.3
Nicholson, J.K.4
Farrant, R.D.5
Reynolds, S.E.6
Wilson, I.D.7
Osborn, D.8
Weeks, J.M.9
-
30
-
-
0034717008
-
Granuloma-specific expression of mycobacterium virulence proteins from the glycine-rich PE-PGRS family
-
Ramakrishnan, L., N. A. Federspiel, and S. Falkow. 2000. Granuloma-specific expression of mycobacterium virulence proteins from the glycine-rich PE-PGRS family. Science 288:1436-1439.
-
(2000)
Science
, vol.288
, pp. 1436-1439
-
-
Ramakrishnan, L.1
Federspiel, N.A.2
Falkow, S.3
-
31
-
-
8744303906
-
Stages of infection during the tripartite interaction between Xenorhabdus nematophila, its nematode vector, and insect hosts
-
Sicard, M., K. Brugirard-Ricaud, S. Pagès, A. Lanois, N. E. Boemare, M. Brehélin, and A. Givaudan. 2004. Stages of infection during the tripartite interaction between Xenorhabdus nematophila, its nematode vector, and insect hosts. Appl. Environ. Microbiol. 70:6473-6480.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 6473-6480
-
-
Sicard, M.1
Brugirard-Ricaud, K.2
Pagès, S.3
Lanois, A.4
Boemare, N.E.5
Brehélin, M.6
Givaudan, A.7
-
32
-
-
0021027842
-
A broad host range mobilization system for in vivo genetic engineering: Transposon mutagenesis in gram negative bacteria
-
Simon, R., U. Priefer, and A. Pühler. 1983. A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in gram negative bacteria. Bio/Technology 1:784-791.
-
(1983)
Bio/Technology
, vol.1
, pp. 784-791
-
-
Simon, R.1
Priefer, U.2
Pühler, A.3
-
33
-
-
0000804415
-
Improved method for isolation of thymine-requiring mutants of Escherichia coli
-
Stacey, K. A., and E. Simson. 1965. Improved method for isolation of thymine-requiring mutants of Escherichia coli. J. Bacteriol. 90:554-555.
-
(1965)
J. Bacteriol.
, vol.90
, pp. 554-555
-
-
Stacey, K.A.1
Simson, E.2
-
34
-
-
0027284363
-
A method for selection of mutations at the tdk locus in Escherichia coli
-
Summers, W. C., and P. Raksin. 1993. A method for selection of mutations at the tdk locus in Escherichia coli. J. Bacteriol. 175:6049-6051.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 6049-6051
-
-
Summers, W.C.1
Raksin, P.2
-
35
-
-
0034906974
-
Xenorhabdus nematophilus as a model for host-bacterium interactions: RpoS is necessary for mutualism with nematodes
-
Vivas, E. I., and H. Goodrich-Blair. 2001. Xenorhabdus nematophilus as a model for host-bacterium interactions: rpoS is necessary for mutualism with nematodes. J. Bacteriol. 183:4687-4693.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 4687-4693
-
-
Vivas, E.I.1
Goodrich-Blair, H.2
-
36
-
-
0031967120
-
Phase variation in Xenorhabdus nematophilus
-
Volgyi, A., A. Fodor, A. Szentirmai, and S. Forst. 1998. Phase variation in Xenorhabdus nematophilus. Appl. Environ. Microbiol. 64:1188-1193.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 1188-1193
-
-
Volgyi, A.1
Fodor, A.2
Szentirmai, A.3
Forst, S.4
-
37
-
-
0003735373
-
Steinernematid and heterorhabditid nematodes: A handbook of biology and techniques
-
Arkansas Agricultural Experiment Station, Fayetteville
-
Woodring, J. L., and H. K. Kaya. 1988. Steinernematid and heterorhabditid nematodes: a handbook of biology and techniques. Southern cooperative series bulletin 331. Arkansas Agricultural Experiment Station, Fayetteville.
-
(1988)
Southern Cooperative Series Bulletin 331
-
-
Woodring, J.L.1
Kaya, H.K.2
-
38
-
-
0033987659
-
Generation of an AraC-araBAD promoter-regulated T7 expression system
-
Wycuff, D. R., and K. S. Matthews. 2000. Generation of an AraC-araBAD promoter-regulated T7 expression system. Anal. Biochem. 277:67-73.
-
(2000)
Anal. Biochem.
, vol.277
, pp. 67-73
-
-
Wycuff, D.R.1
Matthews, K.S.2
-
39
-
-
0025215667
-
Toxicity of irradiated media for Xenorhabdus spp.
-
Xu, J., and R. E. Hurlbert. 1990. Toxicity of irradiated media for Xenorhabdus spp. Appl. Environ. Microbiol. 56:815-818.
-
(1990)
Appl. Environ. Microbiol.
, vol.56
, pp. 815-818
-
-
Xu, J.1
Hurlbert, R.E.2
|