Delimitation of the rice wide compatibility gene S5n to a 40-kb DNA fragment

Theoretical and Applied Genetics

Volumn 111, Issue 6, 2005, Pages 1080-1086

  Qiu, S Q ^a   Liu, Kede ^a   Jiang, J X ^a   Song, X ^a   Xu, C G ^a   Li, X H ^a   Zhang, Qifa ^a  

^a HUAZHONG AGRICULTURAL UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BIOMARKERS; CROPS; DNA; ENZYMES; MAPS;

COMPATIBILITY GENES; GERMPLASMS; POLLENS; SUBSPECIES;

GENES;

ASPARTIC PROTEINASE; CHAPERONE; FUCOSYLTRANSFERASE; HEAT SHOCK PROTEIN; MOLECULAR CHAPERONE GRP78; XYLOGLUCAN 2 FUCOSYLTRANSFERASE; XYLOGLUCAN 2-FUCOSYLTRANSFERASE;

ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; CHROMOSOME WALKING; COMPARATIVE STUDY; CROSS BREEDING; DNA SEQUENCE; FERTILITY; GENE; GENETICS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RICE;

ASPARTIC ENDOPEPTIDASES; CHROMOSOME WALKING; CHROMOSOMES, ARTIFICIAL, BACTERIAL; CROSSES, GENETIC; FERTILITY; FUCOSYLTRANSFERASES; GENES, PLANT; HEAT-SHOCK PROTEINS; MOLECULAR CHAPERONES; ORYZA SATIVA; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; SEQUENCE ANALYSIS, DNA;

BREEDING; CLONES; ENZYMES; GENES; MAPS; MARKERS; NUCLEIC ACIDS; PLANTS; POLLEN; RICE;

EUKARYOTA; JAPONICA; ORYZA SATIVA;

EID: 26444601969     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-005-0033-0     Document Type: Article

References (39)

1. Birren B, Green ED, Klapholz S, Mayers RM, Roskams J (1997) Genome analysis. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, pp 397-454
2. Causse MA, Fulton TM, Cho YG, Ahn SN, Chunwongse J, Wu KS, Xiao JH, Yu ZH, Ronald PC, Harrington SE, Second G, McCouch SR, Tanksley SD (1994) Saturated molecular map of the rice genome based on an interspecific backcross population. Genetics 138:1251-1274
3. Chen X, Temnykh S, Xu Y, Cho YG, McCouch SR (1997) Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L). Theor Appl Genet 95:553-567
4. Hammond C, Helenius A (1995) Quality control in the secretory pathway. Curr Opin Cell Biol 7:523-529
5. 1 between indica and japonica (In Chinese with English abstract). Chin J Rice Sci 8:177-180
6. 1 fertility of distant crosses in rice. Jpn J Breed 34:304-313
7. 1 sterility in remote crosses of rice. In: IRRI (eds) Rice genetics. IRRI, Malina, pp 119-130
8. Kato S, Kosaka H, Hara S (1928) On the affinity of rice varieties as shown by fertility of hybrid plants. Bull Sci Fac Agric Kyushu Univ 3:132-147
9. Kurata N, Nagamura Y, Yamamoto K, Harushima Y, Sue N, Wu J, Antonio BA, Shomura A, Shimizu T, Lin SY, Inoue T, Fukuda A, Shimano T, Kuboki Y, Toyama T, Miyamoto Y, Kirihara T, Hayasaka K, Miyao A, Monna L, Zhong HS, Tamura Y, Wang ZX, Momma T, Umehara Y, Yano M, Sasaki T and Minobe Y (1994) A 300 kilobase interval genetic map of rice including 883 expressed sequences. Nat Genet 8:365-372
10. Li XQ (1988) Improving the fertility of indica-japonica hybrids by using the wide-compatibility gene. Hybrid Rice 3:31-33
11. 1 from indica and japonica (In Chinese with English abstract). In: Yuan LP (ed) Current status of two line hybrid rice research. Agricultural Press, Beijing, pp 286-289
12. Li H, Tang L, Zou J (1991) Marker-based analysis of wide compatibility in rice (in Chinese). Hybrid Rice 4:22-24
13. Ling DH, Ma ZR, Chen MF, Liang CY, He BS (1991) Types of male sterile mutants in somaclones from somatic cell culture of indica rice (In Chinese with English abstract). Acta Genet Sin 18:132-139
14. Liu YG, Whittier RF (1995) Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert and fragments from P1 and YAC clones for chromosome walking. Genomics 25:674-681
15. Liu A, Zhang Q, Li H (1992) Location of a gene for wide-compatibility in the RFLP linkage map. Rice Genet Newsl 9:134-136
16. Liu YS, Zhou KD, Yin GD, Luo WZ (1993) Preliminary cytological observations on female sterility of hybrids between indica and japonica rice (In Chinese with English abstract). Acta Biol Exp Sin 26:95-99
17. 5 locus in the molecular map. Theor Appl Genet 95:809-814
18. Liu YS, Sun JS, Zhou KD (1997b) Cytological basis causing spikelet sterility of intersubspecific hybrid in Oryza sativa (In Chinese with English abstract). Acta Biol Exp Sin 30:335-341
19. Liu HY, Xu CG, Zhang Q (2004) Male and female gamete abortions, and reduced affinity between the uniting gametes as the causes for sterility in an indica/japonica hybrid in rice. Sex Plant Reprod 17:55-62
20. 1 hybrids between rice varieties Silewah and Hayakogane. Jpn J Breed 41:359-363
21. Murray MG, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res 8:4321-4325
22. Peng KM, Zhang HB, Zhang Q (1998) A BAC library constructed to the rice cultivar 'Minghui63' for cloning genes of agronomic importance. Acta Bot Sin 40:1108-1114
23. Ramalho-Santos M, Verissimo P, Cortes L, Samyn B, Van Beeumen J, Pires E, Faro C (1998) Identification and proteolytic processing of procardosin A. Eur J Biochem 255:133-138
24. Saghai Maroof MA, Yang GP, Biyashev RM, Maughan PJ, Zhang Q (1996) Analysis of the barley and rice genomes by comparative RFLP linkage mapping. Theor Appl Genet 92:541-551
25. Sarkinnen P, Kalkkinen N, Tilgman C, Siuro J, Kervinen J, Mikola L (1992) Aspartic proteinases from barley grains is related to mammalian lysosomal cathepsin D. Planta 186:317-323
26. Song X, Qiu SQ, Xu CG, Li XH, Zhang Q (2005) Genetic dissection of embryo-sac fertility, pollen fertility and their contributions to spikelet fertility of an indica-japonica rice hybrid. Theor Appl Genet 110:205-211
27. Tao QZ, Zhao HY, Qiu LY, Hong GF (1994) Construction of a full bacterial artificial chromosome (BAC) library of Oryza sativa genome. Cell Res 4:127-133
28. Temnykh S, Park WD, Ayres N, Cartihour S, Hauck N, Lipovich L, Cho YG, Ishii T, McCouch SR (2000) Mapping and genome organization of microsatellite sequences in rice (Oryza sativa L.). Theor Appl Genet 100:697-712
29. Teng JL, Xue QZ, Wang YX (1996) Ultrastructural observations of pollen and anther wall development between subspecies in rice (Oryza sativa L.) (In Chinese with English abstract). J Zhejiang Agr Univ 22:467-473
30. 1 hybrids between subspecies in rice (In Chinese). J Zhejiang Agr Univ 17:417-422
31. Wang CL, Zhang ZL, Tang SZ, Shi JD (1992) Exploitation of heterosis between indica and japonica by three-line method. I. Differentiation between indica-japonica sterility and cytoplasmic male sterility (In Chinese with English abstract). Jiangsu J Agr Sci 8:1-7
32. Wang J, Liu KD, Xu CG, Li XH, Zhang Q (1998) The high level of wide-compatibility of variety Dular has a complex genetic basis. Theor Appl Genet 97:407-412
33. Wu KS, Tanksley SD (1993) Abundance polymorphism and genetic mapping of microsatellite in rice. Mol Gen Genet 241:225-235
34. Yanagihara S, McCouch SR, Ishikawa K, Ogi Y, Maruyama K, Ikehashi H (1995) Molecular analysis of the inheritance of the S-5 locus, conferring wide compatibility in indica/japonica hybrids of rice (O. sativa L.). Theor Appl Genet 90:182-188
35. Yokoo M (1984) Female sterility in an indica-japonica cross of rice. Jpn J Breed 34:219-227
36. Zhang Q, Zhou ZQ, Yang GP, Xu CG, Liu KD, Saghai Maroof MA (1996) Molecular marker heterozygosity and hybrid performance in indica and japonica rice. Theor Appl Genet 93:1218-1224
37. Zhao MF, Li XH, Yang JB, Xu CG, Hu RY, Liu DJ, Zhang Q (1999) Relationship between molecular marker heterozygosity and hybrid performance in intra- and inter-subspecific crosses in rice. Plant Breed 118:139-144
38. Zheng K, Shen P, Qian H, Wang J (1992) Tagging genes for wide compatibility in rice via linkage to RFLP markers. Chin J Rice Sci 6:145-150
39. Zhu XH, Cao XZ, Zhu QS (1996) Cytological studies on spikelet sterility of indica-japonica hybrids in rice (In Chinese with English abstract). Chin J Rice Sci 10:71-78