Structural genomics of minimal organisms and protein fold space

Journal of Structural and Functional Genomics

Volumn 6, Issue 2-3, 2005, Pages 63-70

  Kim, Sung Hou ^a,b   Shin, Dong Hae ^b   Liu, Jinyu ^b   Oganesyan, Vaheh ^b   Chen, Shengfeng ^a   Xu, Qian Steven ^b   Kim, Jeong Sun ^a   Das, Debanu ^b   Schulze Gahmen, Ursula ^b   Holbrook, Stephen R ^b   Holbrook, Elizabeth L ^b   Martinez, Bruno A ^b   Oganesyan, Natalia ^b   DeGiovanni, Andy ^b   Lou, Yun ^b   Henriquez, Marlene ^b   Huang, Candice ^b   Jancarik, Jaru ^a   Pufan, Ramona ^b   Choi, In Geol ^a   Chandonia, John Marc ^b   Hou, Jingtong ^b   Gold, Barbara ^b   Yokota, Hisao ^b   Brenner, Steven E ^b   Adams, Paul D ^b   Kim, Rosalind ^b   more..

^a UNIVERSITY OF CALIFORNIA   (United States)

^b LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

Author keywords

Berkeley Structural Genomics Center; Minimal organisms; Molecular function; Protein fold space; Structural genomics

Indexed keywords

BACTERIAL PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; AUTOMATION; BACTERIAL GENE; BACTERIAL GENETICS; BACTERIAL GENOME; GENE EXPRESSION; GENE FUNCTION; GENOME ANALYSIS; MOLECULAR BIOLOGY; MOLECULAR CLONING; MYCOPLASMA GENITALIUM; MYCOPLASMA PNEUMONIAE; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN FOLDING; PROTEIN TARGETING; STRUCTURAL GENOMICS; STRUCTURAL PROTEOMICS;

BACTERIAL PROTEINS; CLONING, MOLECULAR; CRYSTALLIZATION; GENOME, BACTERIAL; MODELS, MOLECULAR; MYCOPLASMA GENITALIUM; MYCOPLASMA PNEUMONIAE; PROTEIN FOLDING; PROTEOMICS;

MYCOPLASMA GENITALIUM;

EID: 26444567767     PISSN: 1345711X     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10969-005-2651-9     Document Type: Article

References (18)

1. S.-H. Kim D.H. Shin I.G. Choi U. Schulze-Gahmen S. Chen R. Kim 2003 J. Struct. Funct. Genomics 4 129 135
2. M. Adams A. Joachimiak R. Kim G.T. Montelione J. Norvell 2004 J. Struct. Funct. Genomics 5 1 2
3. A. Bateman E. Birney R. Durbin S.R. Eddy K.L. Howe E.L. Sonnhammer 2000 Nucleic Acid Res. 28 263 266
4. S.F. Altschul W. Gish W. Miller E.W. Myers D.J. Lipman 1990 J. Mol. Biol. 215 403 410
5. J.C. Wootton 1994 Comput. Chem. 18 269 285
6. A. Lupas 1996 Methods Enzymol. 266 513 525
7. A. Krogh B. Larsson G. von Heijne E.L. Sonnhammer 2001 J. Mol. Biol. 305 567 580
8. B. Rost R. Casadio P. Fariselli C. Sander 1995 Protein Sci. 4 521 533
9. C. Aslanidis P.J. de Jong 1990 Nucleic Acids Res. 20 6069 6074
10. D. Busso R. Kim S.-H. Kim 2003 J. Biochem. Biophys. Methods 55 233 240
11. N. Oganesyan S.-H. Kim R. Kim 2004 PharmaGenomics 7 22 26
12. J. Jancarik S.-H. Kim 1991 J. Appl. Crystallogr. 24 409 411
13. J. Jancarik R. Pufan C. Hong S.-H. Kim R. Kim 2004 Acta Crystallogr. D 60 1670 1673
14. S. Chen A.F. Yakunin E. Kuznetsova D. Busso R. Pufan M. Proudfoot R. Kim S.-H. Kim 2004 J. Biol. Chem. 279 31854 31862
15. L. Holm C. Sander 1995 Trends Biochem. Sci. 20 478 480
16. J. Liu H. Yokota R. Kim S.-H. Kim 2004 Proteins 55 1082 1086
17. V. Oganesyan R. Pufan A. DeGiovanni H. Yokota R. Kim S.-H. Kim 2004 Acta Crystallogr. D 60 1266 1271
18. J. Hou G.E. Sims C. Zhang S.-H. Kim 2003 Proc. Natl. Acad. Sci. U.S.A. 100 2386 2390