Structure and switching of bacterial flagellar filaments studied by X- ray fiber diffraction

Nature Structural Biology

Volumn 5, Issue 2, 1998, Pages 125-132

  Yamashita, Llchiro ^a   Hasegawa, Kazuya ^a,b   Suzuki, Hirofumi ^a   Vonderviszt, Ferenc ^a,c   Mimori Kiyosue, Yuko ^a,d   Namba, Keiichi ^a  

^a ADVANCED TELECOMMUNICATIONS RESEARCH INSTITUTE INTERNATIONAL   (Japan)

^b OSAKA UNIVERSITY   (Japan)

^c UNIVERSITY OF PANNONIA   (Hungary)

^d JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

FLAGELLIN;

CELL MOTILITY; DIAGNOSTIC ACCURACY; FLAGELLUM; MOLECULAR INTERACTION; NONHUMAN; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN DOMAIN; PROTEIN QUATERNARY STRUCTURE; PROTEIN STRUCTURE; QUANTITATIVE DIAGNOSIS; REVIEW; SALMONELLA TYPHIMURIUM; X RAY DIFFRACTION;

CRYSTALLOGRAPHY, X-RAY; FLAGELLA; FLAGELLIN; IMAGE PROCESSING, COMPUTER-ASSISTED; PROTEIN CONFORMATION; SALMONELLA TYPHIMURIUM;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; SALMONELLA TYPHIMURIUM; TYPHIMURIUM;

EID: 2642692699     PISSN: 10728368     EISSN: None     Source Type: Journal    
DOI: 10.1038/nsb0298-125     Document Type: Review

References (35)

1. Berg, H. C. & Anderson, R. A. Bacteria swim by rotating their flagellar filaments. Nature 245, 380-382 (1973).
2. Silverman, M. & Simon, M. Flagellar rotation and the mechanism of bacterial motility. Nature 249, 73-74 (1974).
3. Larsen, S. H., Reader, R. W., Kort, E. N., Tso, W. W. & Adler, J. Change in direction of flagellar rotation is the basis of the chemotactic response in Escherichia coli. Nature 249, 74-77 (1974).
4. Macnab, R. M. & Ornston, M. K. Normal-to-curly flagellar transitions and their role in bacterial tumbling, stabilization of an alternative quaternary structure by mechanical force. J. Mot. Biol. 112, 1-30 (1977).
5. Leifson, E. Atlas of bacterial flagellation, (Academic Press, New-York; 1960).
6. lino, T. & Mitani, M. Flagella-shape mutants in Salmonella. J. Gen. Microbiol. 44, 27-40 (1966).
7. Martinez, R. J., Ichiki, A. T., Lundh, N. P. & Tronick, S. R. Single amino acid substitution responsible for altered flagellar morphology. J. Mol. Biol. 34, 559-564 (1968).
8. Asakura, S. & lino, T. Polymorphism of Salmonella flagella as investigated by means of in vitro copolymerization of flagellins derived from various strains. J. Mol. Biol. 4, 251-268 (1972).
9. lino. T., Oguchi, T. & Kuroiwa, T. Polymerization in flagellar-shape mutants of Salmonella typhimurium. J. Gen. Microbiol. 81, 37-45 (1974).
10. Hyman H. C. & Trachtenberg, S. Point mutations that lock Salmonella typhimurium flagellar filaments in the straight right-handed and left-handed form and their relationship to filament superhelicity. J. Mol. Biol. 220, 79-88 (1991).
11. Kanto, S., Okino, H., Aizawa, S.-l. & Yamaguchi, S. Amino acids responsible for flagellar shape are distributed in terminal regions of flagellin. J. Mol. Biol. 219, 471-480 (1991).
12. Kamiya, R, & Asakura, S. Helical transformations of Salmonella flagella in vitro. J. Mol. Biol. 106, 167-186 (1976).
13. Kamiya, R. & Asakura, S. Flagellar transformations at alkaline pH. J. Mol. Biol. 108, 513-518 (1977).
14. Hotani, H. Micro-video study of moving bacterial flageuar filaments III. Cyclic transformation induced by mechanical force. J. Mol. Biol. 156, 791-806 (1982).
15. O'Brien, E. J. & Bennett, P. M. Structure of straight flagella from a mutant Salmonella. J. Mol. Biol. 70, 133-152 (1972).
16. Asakura, S. Polymerization of flagellin and polymorphism of flagella. Advan. Biophys. 1, 99-155 (1970).
17. Calladine, C R. Construction of bacterial flagella. Nature, 225, 121-124 (1975).
18. Calladine, C. R. Design requirements for the construction of bacterial flagella. J. Theoret Biol. 57, 469-189 (1976).
19. Calladine. C. R. Change of waveform in bacterial flagella: The role of mechanics at the molecular level J. Mol. Biol. 118, 457-479 (1978).
20. Kamiya, R., Asakura, S., Wakabayashi, K. & Namba, K. Transition of bacterial flagella from helical to straight forms with different subunit arrangements. L Mol. Biol. 131, 725-742 (1979).
21. Kamiya, R., Asakura, S. & Yamaguchi, S. Formation of helical filaments by copolymerization of two types of 'straight' flagellins. Nature, 286, 628-630 (1980).
22. Mimori, Y. et al. The structure of the R-type straight flageller filament of Salmonella at 9 Å resolution by electron cryomicroscopy. J. Mol. Biol. 249, 69-87 (1995).
23. Morgan, D. G., Owen, C., Melanson, L. A. & DeRosier, D. J. Structure of bacterial flagellar filaments at 11 Å resolution: Packing of the α-hefices. J. Mol. Biol. 249, 88-110 (1995).
24. Mimori-Kiyosue, Y., Vonderviszt, F., Yamashita, I., Fujiyoshi, Y. & Namba, K. Direct interaction of flagellin termini essential for polymorphic ability of flagellar filament. Proc. Natl. Acad Sci. USA. 93, 15108-15113 (1996).
25. Vonderviszt F., Kanto, S., Aizawa, S.-I. & Namba, K. Terminal regions of flagellin are disordered in solution. J. Mol. Biol. 209, 127-133 (1989).
26. Mimori-Kiyosue, Y., Vonderviszt, F. & Namba, K. Locations of terminal segments of flagellin in the filament structure and their roles in polymorphism and polymerization. J. Mol. Biol. 270, 222-237 (1997).
27. Vonderviszt, F., Aizawa, S.-I. & Namba, K. Role of the disordered terminal regions of flagellin in filament formation and stability. J. Mol. Biol. 221, 1461-1474 (1991).
28. Yamashita, I., Vonderviszt F., Noguchi, T. & Namba, K. Preparing well-oriented sols of straight flagellar filaments for X-ray fiber diffraction. J. Mol. Biol. 217, 293-302 (1991).
29. Namba, K., Yamashita, I. & Vonderviszt, F. Structure of the core and central channel of bacterial flagella. Nature 342, 648-654 (1989).
30. Yamashita, I. et al. Radial mass analysis of the flagellar filament of Salmonella: Implications for subunit folding. J. Mol. Biol. 253, 547-558 (1995).
31. Namba, K. & Stubbs, G. Solving the phase problem in fiber diffraction. Application to tobacco mosaic virus at 3.6 Å resolution. Acta Crystallogr A41, 252-262 (1985).
32. Namba, K. & Vonderviszt, F. Molecular architecture of bacterial fiagellum. Quart. Rev. Biophys. 30, 1-65 (1997).
33. Makowski, L. Processing of X-ray diffraction data from partially oriented specimens. J. Appl. Crystallogr. 11, 273-283 (1978).
34. Hasegawa, K., Yamashita, I. & Namba, K. Quasi- and non-equivalence in the structure of bacterial flagellar filament. Biophys. J. in the press.
35. Kamiya, R., Hotani, H. & Asakura, S. Polymorphic transition in bacterial flagella, Symp. Soc. Exp. Biol. 35, 53-76 (1985).