Peculiarities of metabolism and functions of high-molecular inorganic polyphosphates in yeasts as representatives of lower eukaryotes

Molekulyarnaya Biologiya

Volumn 39, Issue 4, 2005, Pages 567-580

  Kulaev, I S ^a   Vagabov, V M ^a   Kulakovskaya, T V ^a   Andreeva, N A ^a   Lichko, L P ^a   Trilisenko, L V ^a  

^a SKRYABIN INSTITUTE OF BIOCHEMISTRY AND PHYSIOLOGY OF MICROORGANISMS   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

BIOPOLYMER; FUNGAL ENZYME; INORGANIC COMPOUND; PHOSPHATASE; POLYPHOSPHATE;

CELL COMPARTMENTALIZATION; DATA ANALYSIS; ENZYME METABOLISM; EUKARYOTE; FUNCTIONAL ASSESSMENT; GENE MUTATION; METABOLIC REGULATION; NONHUMAN; REVIEW; YEAST CELL; CHEMISTRY; CYTOSOL; ENZYMOLOGY; GENETICS; METABOLISM; MOLECULAR WEIGHT; MUTATION; SACCHAROMYCES CEREVISIAE;

EUKARYOTA;

CYTOSOL; INORGANIC CHEMICALS; MOLECULAR WEIGHT; MUTATION; POLYPHOSPHATES; SACCHAROMYCES CEREVISIAE;

EID: 25644443271     PISSN: 00268984     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review

References (87)

1. Lieberman L. 1888. Über das Nuclein der Hefe und Kunstliche Darstellung eines Nucleus Eiweiss und Metaphosphatsaure. Ber. Chem. Ges. 21, 598-607.
2. AH CCCP. 3, 354-368.
3. Liss E., Langen P. 1962. Versuche zur Polyphosphat-Uberkompensation in Heffenzellen nach Phosphatverarmung. Arch. Microbiol. 41, 383-392.
4. Harold F.M. 1966. Inorganic polyphosphates in biology: structure, metabolism, and functions. Bacteriol. Rev. 30, 772-794.
5. Kulaev I.S. 1979. The Biochemistry of Inorganic Polyphosphates. Wiley.
6. Kulaev I.S., Vagabov V.M. 1983. Polyphosphate metabolism in microorganisms. Adv. Microbiol. Physiol. 24, 83-171.
7. Wood H.G., Clark J.E. 1988. Biological aspects of inorganic polyphosphates. Ann. Rev. Biochem. 57, 235-260.
8. Kornberg A. 1995. Inorganic polyphosphate: toward making a forgotten polymer unforgettable. J. Bacteriol. 177, 491-496.
9. Kornberg A., Rao N.N., Ault-Riché D. 1999. Inorganic Polyphosphate: a molecule with many functions. Ann. Rev. Biochem. 68, 89-125.
10. Kulaev I., Vagabov V., Kulakovskaya T. 1999. New aspects of polyphosphate metabolism and function. J. Biosci. Bioeng. 88, 111-129.
11. Kulaev I.S., Kulakovskaya T.V. 2000. Polyphosphate and phosphate pump. Ann. Rev. Microbiol. 54, 709-735.
12. nd Edition.
13. Wiame J.M. 1947. Etude d'une substance polyphosphoree, basophillie et metachromatique chez les levures. Biochim. Biophys. Acta. 1, 234-255.
14. Jacobson L., Helman M., Yariv J. 1982. The molecular composition of the volutin granules of yeast. Biochem. J. 201, 437-479.
15. Okorokov L.A., Lichko L.P., Kulaev I.S. 1980. Vacuoles: the main compartment of potassium, magnesium and phosphate ions in Saccharomyces carlsbergensis cells. J. Bacteriol. 144, 661-665.
16. Reusch R.N., Sadoff H.L. 1988. Putative structure and functions of poly-beta-hydroxybutirate/calcium polyphosphate channel in bacterial plasma membranes. Proc. Natl. Acad. Sci. USA. 85, 4176-4180.
17. Tijssen J.P.F., Beekes H.W., van Steveninck J. 1982. Localization of polyphosphate in Saccharomyces fragilis, as revealed by 4′,6′- diamidino-2-phenylindole fluorescence. Biochem. Biophys. Acta. 721, 394-398.
18. AH CCCP. 313, 989-992.
19. Tijssen J.P.F., Dubbelman T.M.A.R., van Steveninck J. 1983. Isolation and characterization of polyphosphates from the yeast cell surface. Biochem. Biophys. Acta. 760, 143-148.
20. Tijssen, J.P.F., van Steveninck J. 1984. Detection of a yeast polyphosphate fraction localized outside the plasma membrane by the method of phosphorus-31 nuclear masnetic resonance. Biochem. Biophys. Res. Comm. 119, 447-451.
21. Tijssen J.P.F., van Steveninck J. 1985. Cytochemical staining of a yeast polyphosphate fraction, localized outside the plasma membrane. Protoplasma. 125, 124-128.
22. Voříšek J., Knotková A., Kotyk A. 1982. Fine cytochemical localization of polyphosphates in the yeast Saccharomyces cerevisiae. Zbl. Mikrobiol. 137, 421-432.
23. AH CCCP. 249, 243-246.
24. Matile P. 1978. Biochemistry and function of vacuoles. Ann. Rev. Plant. Physiol. 29, 193-213.
25. Wiemken A., Schelleberg M., Urech R. 1979. Vacuoles: the sole compartments of digestive enzymes in yeast (Saccharomyces cerevisiae). Arch. Microbiol. 123, 23-25.
26. Indge K.J. 1968. Polyphosphates of the yeast cell vacuole. J. Gen. Microbiol. 51, 447-455.
27. Westenberg B., Boiler T., Wiemken A. 1989. Lack of arginine- and polyphosphate storage pools in a vacuole-deficient mutany (end 1) of S. cerevisiae. FEBS Lett. 254, 133-136.
28. Shirahama K., Yazaki Y., Sakano K., Wada Y., Ohsumi Y. 1996. Vacuolar function in the phosphate homeostasis of the yeast Saccharomyces cerevisiae. Plant. Cell. Physiol. 37, 1090-1093.
29. Nunez C.G., Callieri A.S. 1989. Studies on the polyphosphate cycle in Candida utilis. Effect of dilution rate and nitrogen source in continuous culture. Appl. Microbiol. Biotechnol. 31, 562-566.
30. 2+ and orthophosphate ions in cytoplasm of the yeast Saccharomyces carlsbergensis. Arch. Microbiol. 132, 289-293.
31. 31P-nuclear magnetic resonance study. Biochim. Biophys. Acta. 926, 205-214.
32. 31P nuclear magnetic resonance for observation of polyphosphate and catabolite responses of chemostat-cultivated Saccharomyces cerevisiae after alkalinization. Appl. Environ. Microbiol. 61, 4448-4453.
33. Lusby E.W., McLaughlin C.S. 1980. The metabolic properties of acid soluble polyphosphates in Saccharomyces cerevisiae. Mol. Gen. Genet. 178, 69-76.
34. Beauvoit B., Rigonlet M., Guerin B., Canioni P. 1989. Polyphosphates as a source of high energy phosphates in yeast mitochondria: a P-NMR study. FEBS Lett. 252, 17-22.
35. Pestov N.A., Kulakovskaya T.V., Kulaev I.S. 2004. Inorganic polyphosphate in mitochondria of Saccharomyces cerevisiae at phosphate limitation and phosphate excess. FEMS Yeast Research. 4, 643-648.
36. Pestov N.A., Kulakovskaya T.V., Kulaev I.S. 2005. Effects of the PPN1 gene inactivation on exopolyphosphatases, inorganic polyphosphates and function of mitochondria in the yeast Saccharomyces cerevisiae. FEMS Yeast Res. B.
37. Kornberg A., Kornberg S., Simms E. 1956. Methaphosphate synthesis by enzyme from Eschericliia coli. Biochim. Biophys. Acta. 20, 215-227.
38. Zhang H., Ishige K., Kornberg A. 2002. A polyphosphate kinase (PPK2) widely conserved in bacteria. Proc. Natl. Acad. Sci. USA. 99, 16678-16683.
39. Felter S., Stahl A.J.C. 1973. Enzymes du metabolisme des polyphosphates dans la levure. III. Purification et proprietes de la polyphosphate-ADP- phosphotransferase. Biochimie. 55, 245-251.
40. 4- tetraphosphate α,β-phosphorylase. J. Biol. Chem. 270, 19377-19382.
41. Sethuraman A., Rao N.N., Kornberg A. 2001. The endopolyphosphatase gene: essential in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA. 98, 8542-8547.
42. Akiyama M., Crooke E., Kornberg A. 1993. An exopolyphosphatase of Escherichia coli. The enzyme and its ppx gene in a polyphosphate operon. J. Biol. Chem. 268, 633-639.
43. Keasling J.D., Bertsh L., Kornberg A. 1993. Guanosine pentaphosphate phosphohydrolase of Escherichia coli is a long-chain exopolyphosphatase. Proc. Natl. Acad. Sci. USA. 90, 7029-7033.
44. Reizer J., Reizer A., Saier M.H.Jr., Bork B., Sander C. 1993. Exopolyphosphate phosphatase and guanosine pentaphosphate phosphatase belong to the sugar kinase/actin/hsp 70 superfamily. Trends Biochem. Sci. 18, 247-248.
45. Wurst H., Shiba T., Kornberg A. 1995. The gene for a major exopolyphosphatase of Saccharomyces cerevisiae. J. Bacteriol. 177, 898-906.
46. Wurst H., Kornberg A. 1994. A soluble exopolyphosphatase of Saccharomyces cerevisiae. J. Biol. Chem. 269, 10996-11001.
47. Andreeva N.A., Kulakovskaya T.V., Karpov A.V., Sidorov I.A., Kulaev I.S. 1998. Purification and properties of polyphosphatase from Saccharomyces cerevisiae cytosol. Yeast. 14, 383-390.
48. Lichko L.P., Andreeva N.A., Kulakovskaya T.A., Kulaev I.S. 2003. Exopolyphosphatases of the yeast Saccharomyces cerevisiae. FEMS Yeast Research. 3, 233-238.
49. Guranowski A., Starzynska E., Barnes L.D., Robinson A.K., Liu S. 1998. Adenosine 5′-tetraphosphate phosphohydrolase activity is an inherent property of soluble exopolyphosphatase from Saccharomyces cerevisiae. Biochim. Biophys. Acta. 1380, 232-238.
50. Phillips N.F.B., Horn P.J., Wood H.G. 1993. The polyphosphate and ATP dependent glucokinase from Propionibacterium shermanii: both activities are catalyzed by the same protein. Arch. Biochem. Biophys. 300, 309-319.
51. Kawai S., Mori S., Mukai T., Suzuki S., Yamada T., Hashimoto W., Murata K. 2000. Inorganic Polyphosphate/ATP-NAD kinase of Micrococcus flavus and Mycobacterium tuberculosis H37Rv. Biochem. Biophys. Res. Commun. 276, 57-63.
52. Kawai S., Mori S., Mukai T., Hashimoto W., Murata K. 2001. Molecular characterization of Escherichia coli NAD kinase. Eur. J. Biochem. 268, 4359-4365.
53. Schuddemat J. de Boo R., van Leeuwen C.C.M., van den Broek P.J.A., van Steveninck J. 1989. Polyphosphate synthesis in yeast. Biochem. Biophys. Acta. 100, 191-198.
54. Kulakovskaya T.V., Andreeva N.A., Trilisenko L.V., Vagabov V.M., Kulaev I.S. 2004. Two exopolyphosphatases in Saccharomyces cerevisiae cytosol at different culture conditions. Process Biochemistry. 39, 1625-1630.
55. Den Hollander J.A., Ugurbil T., Brown T.R., Shulman R.G. 1981. Phosphorus-31 nuclear magnetic resonance studies on the effect of oxygen upon glycolysis in yeast. Biochemistry. 20, 5871-5880.
56. McGrath J.W., Quinn J.P. 2000. Intracellular accumulation of polyphosphate by the yeast Candida humicola G-1 in response to acid pH. Appl. Environ. Microbiol. 66, 4068-4073.
57. 13C nuclear magnetic resonance. Arch. Microbiol. 153, 384-391.
58. Herve M., Wietzerbin J., Lebourguais O., Tran-Dinh S. 1992. Effects of 2-deoxy-D-glucose on the glucose metabolism in Saccharomyces cerevisiae studied by multinuclear-NMR spectroscopy and biochemical methods. Biochimie. 74, 1103-1115.
59. 31P-NRM evidence for cytoplasmic acidification and phosphate extrusion in syringomycin-treated cells of Rhodotorula pilimana. Biochem. Biophys. Acta. 1010, 325-329.
60. 31P Nuclear magnetic resonance study of the effect of azide on xylose fermentation by Candida tropicalis. Appl. Envinron. Microbiol. 55, 1974-1980.
61. Beauvoit B., Rigoulet M., Raffard G., Canioni P., Guerin B. 1991. Differential sensitivity of the cellular compartments of Saccharomyces cerevisiae to protonophoric uncoupler under fermentative and respiratory energy supply. Biochemistry. 30, 11212-11220.
62. + ions as an energy source in the yeast Saccharomyces carlsbergensis. Biochem. Internat. 6, 463-472.
63. Lichko L., Kulakovskaya T., Kulaev I. 2004. Inactivation of endopolyphosphatase gene PPN1 results in inhibition of expression of exopolyphosphatase PPX1 and high-molecular-mass exopolyphosphatase not encoded by PPX1 in Saccharomyces cerevisiae. Biochem. Biphys. Acta. 1674, 98-102.
64. Ogawa N., DeRisi J., Brown P.O. 2000. New components of a system for phosphate accumulation and polyphosphate metabolism in Saccharomyces cerevisiae revealed by genomic expression analysis. Mol. Biol. Cell. 11, 4309-4321.
65. Persson B.L., Lagerstedt J.O., Pratt J.R., Pattison-Granberg J., Lundh K., Shokrollahzadeh S., Lundh F. 2003. Regulation of phosphate acquisition in Saccharomyces cerevisiae. Curr. Genet. 43, 225-244.
66. Nishimura K., Yasumura K., Igarashi K., Kakinuma Y. 1999. Involvement of Spt7p in vacuolar polyphosphate level of Saccharomyces cerevisiae. Biochem. Biophys. Res. Commun. 257, 835-838.
67. Solimene R., Guerrini A.M., Donini P. 1980. Levels of acid-soluble polyphosphate in growing cultures of Saccharomyces cerevisiae. J. Bacteriol. 143, 6710-6714.
68. Karpichev I.V., Cornivelli L., Small G.M. 2002. Multiple regulatory roles of a novel Saccharomyces cerevisiae protein, encoded by YOUL002c, in lipid and phosphate metabolism. J. Biol. Chem. 277, 19609-19617.
69. Kisselev L.L., Justesen J., Wolfson A.D., Frolova L.Y. 1998. Diadenosine oligophosphates (ApNA), a novel class of signalling molecules. FEBS Lett. 2427, 157-163.