Comparative analysis of expression of histone H2a genes in mouse

BMC Genomics

Volumn 6, Issue , 2005, Pages

  Nishida, Hiromi ^a   Suzuki, Takahiro ^a   Ookawa, Hiroki ^a   Tomaru, Yasuhiro ^a   Hayashizaki, Yoshihide ^a  

^a RIKEN YOKOHAMA INSTITUTE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; HISTONE H2A;

ACETYLATION; ANIMAL CELL; ARTICLE; CELL SYNCHRONIZATION; CONTROLLED STUDY; DNA SYNTHESIS; GENE CLUSTER; GENE EXPRESSION; GENE IDENTIFICATION; GENE REPLICATION; GENE SEQUENCE; GENETIC TRANSCRIPTION; GENETIC VARIABILITY; IMMUNOPRECIPITATION; MOUSE; NONHUMAN; PROMOTER REGION; QUANTITATIVE ANALYSIS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

EID: 25444505902     PISSN: 14712164     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-6-108     Document Type: Article

References (18)

1. Luger K, Mäder AW, Richmond RK, Sargent DF, Richmond TJ: Crystal structure of the nucleosome core particle at 2.8 Å resolution. Nature 1997, 389:251-260.
2. Marzluff WF, Duronio RJ: Histone mRNA expression: multiple levels of cell cycle regulation and important developmental consequences. Curr Opin Cell Biol 2002, 14:692-699.
3. Rice JC, Allis CD: Histone methylation versus histone acetylation: new insights into epigenetic regulation. Curr Opin Cell Biol 2001, 13:263-273.
4. Sims RJ III, Mandal SS, Reinberg D: Recent highlights of RNA-polymerase-II-mediated transcription. Curr Opin Cell Biol 2004, 16:263-271.
5. Ehrenhofer-Murray AE: Chromatin dynamics at DNA replication, transcription and repair. Eur J Biochem 2004, 271:2335-2349.
6. Meneghini MD, Wu M, Madhani HD: Conserved histone variant H2A.Z protects euchromatin from the ectopic spread of silent heterochromatin. Cell 2003, 112:725-736.
7. Roh T-Y, Cuddapah S, Zhao K: Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping. Genes Dev 2005, 19:542-552.
8. Marzluff WF, Gongidi P, Woods KR, Jin J, Maltais LJ: The human and mouse replication-dependent histone genes. Genomics 2002, 80:487-498.
9. Nishida H, Suzuki T, Tomaru Y, Hayashizaki Y: A novel replication-independent histone H2a gene in mouse. BMC Genetics 2005, 6:10.
10. Hatch CL, Bonner WM: The human histone H2A.Z gene. Sequence and regulation. J Biol Chem 1990, 265:15211-15218.
11. Mannironi C, Bonner WM, Hatch CL: H2A.X. a histone isoprotein with a conserved C-terminal sequence, is encoded by a novel mRNA with both DNA replication type and polyA 3′ processing signals. Nucleic Acds Res 1989, 17:9113-9126.
12. Harris ME, Böhni R, Schneiderman MH, Ramamurthy L, Schümperli D, Marzluff WF: Regulation of histone mRNA in the unperturbed cell cycle: evidence suggesting control at two posttranscriptional steps. Mol Cell Biol 1991, 11:2416-2424.
13. Osley MA: The regulation of histone synthesis in the cell cycle. Annu Rev Biochem 1991, 60:827-861.
14. Oswald F, Dobner T, Lipp M: The E2F transcription factor activates a replication-dependent human H2A gene in early S phase of the cell cycle. Mol Cell Biol 1996, 16:1889-1895.
15. Crechowski T, Bari RP, Stitt M, Scheible WR, Udvardi MK: Realtime RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes. Plant J 2004, 38:366-379.
16. Nishida H, Tomaru Y, Oho Y, Hayashizaki Y: Naturally occurring antisense RNA of histone H2a in mouse cultured cell lines. BMC Genetics 2005, 6:23.
17. ΔΔCT method. Methods 2001, 25:402-408.
18. 0) cells. Nucleic Acids Res 2004, 32:4390-4399.