Phylogenetic relationships among Pyrus pyrifolia and P. communis detected by randomly amplified polymorphic DNA (RAPD) and conserved rDNA sequences

Scientia Horticulturae

Volumn 106, Issue 4, 2005, Pages 491-501

  Kim, C S ^a   Lee, C H ^a   Park, K W ^a   Kang, S J ^b   Shin, I S ^b   Lee, G P ^c  

^a Korea University   (South Korea)

^b National Institute of Animal Science   (South Korea)

^c Chung Ang University   (South Korea)

Author keywords

Phylogeny; Pyrus communis; Pyrus pyrifolia; RAPD; rDNA

Indexed keywords

GENETIC MARKER; PHYLOGENETICS;

PYRUS; PYRUS COMMUNIS; PYRUS PYRIFOLIA;

EID: 25444481270     PISSN: 03044238     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.scienta.2005.04.009     Document Type: Article

References (20)

1. S.F. Altschul, T.L. Madden, A.A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D.J. Lipman Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 1997 3389 3402
2. Cheong, K.H., 1994. Taxonomic studies on native and cultivated Pyrus species in Korea. Ph.D. Thesis. Seoul National University.
3. J.G. Dubouzet, and K. Shinoda Phylogenetic analysis of the internal transcribed spacer region of Japanese Lilium species Theor. Appl. Genet. 98 1999 954 960
4. R.J. Duff, and D.L. Nickrent Phylogenetic relationships of land plants using mitochondrial small-subunit rDNA sequences Am. J. Bot. 86 1999 372 386
5. M. Haruta, M. Murata, H. Kodakura, and S. Homma Immunological and molecular comparison of polyphenol oxidase in Rosaceae fruit trees Phytochemistry 50 1999 1021 1025
6. J.T. Jang, K. Tanabe, F. Tamura, and K. Banno Identification of Pyrus species by peroxidase isozyme phenotypes of flower buds J. Jpn. Soc. Hort. Sci. 60 1991 513 519
7. S.B. Jones Jr., and A.E. Luchsinger Plant Systematics second ed. 1987 McGraw hill Singapore pp. 1-5, 31-34, 83-107
8. H. Katayama, and C. Uematsu Comparative analysis of chloroplast DNA in Pyrus species: physical map and gene lacalization Theor. Appl. Genet. 106 2003 303 310
9. C.S. Kim, C.H. Lee, J.S. Shin, Y.S. Jung, and N.I. Hyung A simple and rapid method for isolation of high quality genomic DNA from fruit trees and conifers using PVP Nucleic Acids Res. 25 1997 1085 1086
10. C.S. Kim, G.P. Lee, D.H. Han, K.H. Ryu, and C.H. Lee Classification and identification of Pyrus pyrifolia using RAPD J. Kor. Soc. Hort. Sci. 41 2 2000 119 124
11. C.S. Kim, G.P. Lee, D.H. Han, K.H. Ryu, and C.H. Lee Molecular phylogeny of Pyrus pyrifolia based on the 18S rDNA sequences J. Kor. Soc. Hort. Sci. 41 2 2000 129 134
12. T. Kimura, Y.Z. Shi, M. Shoda, K. Kotobuki, N. Matsuta, T. Hayashi, Y. Ban, and T. Yamamoto Identification of Asian pear varieties by SSR analysis Breeding Sci. 52 2002 115 121
13. M.M. Miyamoto, and J. Cracraft Phylogenetic inference, DNA sequence analysis, and the future of molecular systematics M.M. Miyamoto J. Cracraft Phylogenetic Analysis of DNA Sequences 1991 Oxford University Press New York, NY 1 17
14. L. Monte-Corvo, L. Goulão, and C. Oliveira ISSR analysis of cultivars of pear and suitability of molecular markers for clone discrimination J. Am. Soc. Hort. Sci. 126 2001 517 522
15. M. Nei, and W.H. Li Mathematical model for studying genetic variation in terms of restriction endonucleases Proc. Natl. Acad. Soc. U.S.A. 76 1979 5269 5273
16. C.M. Oliveira, M. Mota, L. Monte-Corvo, L. Goulao, and D.L. Silva Molecular typing of Pyrus based on RAPD markers Sci. Hort. 79 1999 163 174
17. K.K. Shim, B.K. Suh, and S.H. Park Palynotaxonomic study on Pyrus species J. Kor. Soc. Hort. Sci. 29 1988 102 108
18. Y. Teng, K. Tanabe, F. Tamura, and A. Itai Genetic relationships of Pyrus species and cultivars native to East Asia revealed by randomly amplified polymorphic DNA markers J. Am. Soc. Hort. Sci. 127 2002 262 270
19. S. Teramoto, Y. Kano-Murakami, M. Hori, and K. Kamiyama 'DNA finger-printing' to distinguish cultivar and parental relation of Japanese pear J. Jpn. Soc. Hort. Sci. 63 1994 17 21
20. T. Yamamoto, T. Kimura, Y. Sawamura, K. Kotobuki, Y. Ban, T. Hayashi, and N. Matsuta SSRs isolated from apple can identify polymorphism and genetic diversity in pear Theor. Appl. Genet. 102 2001 865 870