-
2
-
-
0033082516
-
Proteomics: A major new technology for the drug discovery process
-
Page MJ, Amess B, Rohlff C, Stubberfield C, Parekh R. Proteomics: a major new technology for the drug discovery process. Drug Discov Today 1999;4:55-62.
-
(1999)
Drug Discov Today
, vol.4
, pp. 55-62
-
-
Page, M.J.1
Amess, B.2
Rohlff, C.3
Stubberfield, C.4
Parekh, R.5
-
3
-
-
0012671418
-
Defining the mandate of proteomics in the post genomics era: Workshop report
-
Kenyon GL, DeMarini DM, Fuchs E, Galas DJ, Kirsch JF, Leyh TS, Moos WH, Petsko GA, Ringe D, Rubin GM, Sheahan LC. Defining the mandate of proteomics in the post genomics era: workshop report. Mol Cell Proteom 2002;1:763-780.
-
(2002)
Mol Cell Proteom
, vol.1
, pp. 763-780
-
-
Kenyon, G.L.1
DeMarini, D.M.2
Fuchs, E.3
Galas, D.J.4
Kirsch, J.F.5
Leyh, T.S.6
Moos, W.H.7
Petsko, G.A.8
Ringe, D.9
Rubin, G.M.10
Sheahan, L.C.11
-
4
-
-
0037235881
-
Virtual screening to enrich hit lists from high-throughput screening: A case study on small-molecule inhibitors of angiogenin
-
Jenkins JL, Kao RY, Shapiro R. Virtual screening to enrich hit lists from high-throughput screening: a case study on small-molecule inhibitors of angiogenin. Proteins 2003;50:81-93.
-
(2003)
Proteins
, vol.50
, pp. 81-93
-
-
Jenkins, J.L.1
Kao, R.Y.2
Shapiro, R.3
-
5
-
-
0030756360
-
Reactive compounds and in vitro false positives in HTS
-
Rishton GM. Reactive compounds and in vitro false positives in HTS. Drug Discov Today 1997;2:382-384.
-
(1997)
Drug Discov Today
, vol.2
, pp. 382-384
-
-
Rishton, G.M.1
-
6
-
-
0037107887
-
Structure-based virtual screening: An overview
-
Lyne PD. Structure-based virtual screening: an overview. DDT 2002;7:1047-1055.
-
(2002)
DDT
, vol.7
, pp. 1047-1055
-
-
Lyne, P.D.1
-
8
-
-
0036007208
-
Virtual screening and fast automated docking methods
-
Schneider G, Böhm HJ. Virtual screening and fast automated docking methods. Drug Discov Today 2002;7:64-70.
-
(2002)
Drug Discov Today
, vol.7
, pp. 64-70
-
-
Schneider, G.1
Böhm, H.J.2
-
9
-
-
0033915678
-
Recent developments in structure based drug design
-
Klebe G. Recent developments in structure based drug design. J Mol Med 2000;78:269-281.
-
(2000)
J Mol Med
, vol.78
, pp. 269-281
-
-
Klebe, G.1
-
10
-
-
0031920049
-
Aldose reductase in glucose toxicity: A potential target for the prevention of diabetic complications
-
Yabe-Nishimura C. Aldose reductase in glucose toxicity: a potential target for the prevention of diabetic complications. Pharmacol Rev 1998;50:21-33.
-
(1998)
Pharmacol Rev
, vol.50
, pp. 21-33
-
-
Yabe-Nishimura, C.1
-
11
-
-
0026443085
-
The crystal structure of the aldose reductase NADPH binary complex
-
Borhani DW, Harters TM, Petrash JM. The crystal structure of the aldose reductase NADPH binary complex. J Biol Chem 1992;267:24841-24847.
-
(1992)
J Biol Chem
, vol.267
, pp. 24841-24847
-
-
Borhani, D.W.1
Harters, T.M.2
Petrash, J.M.3
-
12
-
-
12944300996
-
The structure of human aldose reductase bound to the inhibitor IDD384
-
Calderone V, Chevrier B, Van Zandt M, Lamour V, Howard E, Poterszman A, Barth P, Mitschler A, Lu J, Dvornik DM, Klebe G, Kraemer O, Moorman AR, Moras D, Podjarny A. The structure of human aldose reductase bound to the inhibitor IDD384. Acta Crystallogr D Biol Crystallogr 2000;56:536-540.
-
(2000)
Acta Crystallogr D Biol Crystallogr
, vol.56
, pp. 536-540
-
-
Calderone, V.1
Chevrier, B.2
Van Zandt, M.3
Lamour, V.4
Howard, E.5
Poterszman, A.6
Barth, P.7
Mitschler, A.8
Lu, J.9
Dvornik, D.M.10
Klebe, G.11
Kraemer, O.12
Moorman, A.R.13
Moras, D.14
Podjarny, A.15
-
13
-
-
0032578366
-
Structural features of the aldose reductase and aldehyde reductase inhibitor-binding sites
-
El-Kabbani O, Wilson DK, Petrash M, Quiocho FA. Structural features of the aldose reductase and aldehyde reductase inhibitor-binding sites. Mol Vis 1998;4:19.
-
(1998)
Mol Vis
, vol.4
, pp. 19
-
-
El-Kabbani, O.1
Wilson, D.K.2
Petrash, M.3
Quiocho, F.A.4
-
14
-
-
0026531024
-
Novel NADPH-binding domain revealed by the crystal structure of aldose reductase
-
Rondeau JM, Tete-Favier F, Podjarny A, Reymann JM, Barth P, Biellmann JF, Moras D. Novel NADPH-binding domain revealed by the crystal structure of aldose reductase. Nature 1992;355:469-472.
-
(1992)
Nature
, vol.355
, pp. 469-472
-
-
Rondeau, J.M.1
Tete-Favier, F.2
Podjarny, A.3
Reymann, J.M.4
Barth, P.5
Biellmann, J.F.6
Moras, D.7
-
15
-
-
0031570301
-
A "specificity" pocket inferred from the crystal structures of the complexes of aldose reductase with the pharmaceutically important inhibitors Tolrestat and Sorbinil
-
Urzhumtsev A, Tete-Favier F, Mitschler A, Barbanton J, Barth P, Urzhumtseva L, Biellmann JF, Podjarny A, Moras D. A "specificity" pocket inferred from the crystal structures of the complexes of aldose reductase with the pharmaceutically important inhibitors Tolrestat and Sorbinil. Structure 1997;5:601-612.
-
(1997)
Structure
, vol.5
, pp. 601-612
-
-
Urzhumtsev, A.1
Tete-Favier, F.2
Mitschler, A.3
Barbanton, J.4
Barth, P.5
Urzhumtseva, L.6
Biellmann, J.F.7
Podjarny, A.8
Moras, D.9
-
16
-
-
0026719692
-
An unlikely sugar substrate site in the 1.65 Å structure of the human aldose reductase holoenzyme implicated in diabetic complications
-
Wilson DK, Bohren KM, Gabbay KH, Quiocho FA. An unlikely sugar substrate site in the 1.65 Å structure of the human aldose reductase holoenzyme implicated in diabetic complications. Science 1992;257:81-84.
-
(1992)
Science
, vol.257
, pp. 81-84
-
-
Wilson, D.K.1
Bohren, K.M.2
Gabbay, K.H.3
Quiocho, F.A.4
-
17
-
-
0027378377
-
Refined 1.8 Å structure of human aldose reductase complexed with the potent inhibitor Zopolrestat
-
Wilson DK, Tarle I, Petrash JM, Quiocho FA. Refined 1.8 Å structure of human aldose reductase complexed with the potent inhibitor Zopolrestat. Proc Natl Acad Sci USA 1993;90:9847-9851.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 9847-9851
-
-
Wilson, D.K.1
Tarle, I.2
Petrash, J.M.3
Quiocho, F.A.4
-
18
-
-
0028970887
-
1.7 Å structure of FR-1, a fibroblast growth factor-induced member of the aldo-keto reductase family, complexed with coenzyme and inhibitor
-
Wilson DK, Nakano T, Petrash JM, Quiocho FA. 1.7 Å structure of FR-1, a fibroblast growth factor-induced member of the aldo-keto reductase family, complexed with coenzyme and inhibitor. Biochemistry 1995;34:14323-14330.
-
(1995)
Biochemistry
, vol.34
, pp. 14323-14330
-
-
Wilson, D.K.1
Nakano, T.2
Petrash, J.M.3
Quiocho, F.A.4
-
19
-
-
0029911124
-
Synthesis, activity, and molecular modeling of a new series of tricyclic pyridazinones as selective aldose reductase inhibitors
-
Costantino L, Rastelli G, Vescovini K, Cignarella G, Vianello P, Del Corso A, Cappiello M, Mura U, Barlocco D. Synthesis, activity, and molecular modeling of a new series of tricyclic pyridazinones as selective aldose reductase inhibitors. J Med Chem 1996;39:4396-4405.
-
(1996)
J Med Chem
, vol.39
, pp. 4396-4405
-
-
Costantino, L.1
Rastelli, G.2
Vescovini, K.3
Cignarella, G.4
Vianello, P.5
Del Corso, A.6
Cappiello, M.7
Mura, U.8
Barlocco, D.9
-
20
-
-
0033519649
-
1-Benzopyran-4-one antioxidants as aldose reductase inhibitors
-
Costantino L, Rastelli G, Gamberini MC, Vinson JA, Bose P, Iannone A, Staffieri M, Antolini L, Del Corso A, Mura U, Albasini A. 1-Benzopyran-4-one antioxidants as aldose reductase inhibitors. J Med Chem 1999;42:1881-1893.
-
(1999)
J Med Chem
, vol.42
, pp. 1881-1893
-
-
Costantino, L.1
Rastelli, G.2
Gamberini, M.C.3
Vinson, J.A.4
Bose, P.5
Iannone, A.6
Staffieri, M.7
Antolini, L.8
Del Corso, A.9
Mura, U.10
Albasini, A.11
-
21
-
-
0035818920
-
[1,2,4]Triazino[4,3-a]benzimidazole acetic acid derivatives: A new class of selective aldose reductase inhibitors
-
Da Settimo F, Primofiore G, Da Settimo A, La Motta C, Taliani S, Simorini F, Novellino E, Greco G, Lavecchia A, Boldrini E. [1,2,4]Triazino[4,3-a]benzimidazole acetic acid derivatives: a new class of selective aldose reductase inhibitors. J Med Chem 2001;44:4359-4369.
-
(2001)
J Med Chem
, vol.44
, pp. 4359-4369
-
-
Da Settimo, F.1
Primofiore, G.2
Da Settimo, A.3
La Motta, C.4
Taliani, S.5
Simorini, F.6
Novellino, E.7
Greco, G.8
Lavecchia, A.9
Boldrini, E.10
-
22
-
-
0032737043
-
Synthesis and biological activity of aldose reductase inhibitors with Michael acceptor substituents
-
Donkor IO, Abdel-Ghany YS, Kador PF, Mizoguchi T, Bartoszko-Malik A, Miller DD. Synthesis and biological activity of aldose reductase inhibitors with Michael acceptor substituents. Eur J Med Chem 1999;34:253-243.
-
(1999)
Eur J Med Chem
, vol.34
, pp. 253-243
-
-
Donkor, I.O.1
Abdel-Ghany, Y.S.2
Kador, P.F.3
Mizoguchi, T.4
Bartoszko-Malik, A.5
Miller, D.D.6
-
23
-
-
0032548075
-
Synthesis, acitivity, and molecular modeling of new 2,4-dioxo-5-(naphthylmethylene)-3-thiazolidineacetic acids and 2-thioxo analogues as potent aldose reductase inhibitors
-
Fresneau P, Cussac M, Morand J-M, Szymonski B, Tranqui D, Leclerc G. Synthesis, acitivity, and molecular modeling of new 2,4-dioxo-5-(naphthylmethylene)-3-thiazolidineacetic acids and 2-thioxo analogues as potent aldose reductase inhibitors. J Med Chem 1998;41:4706-4715.
-
(1998)
J Med Chem
, vol.41
, pp. 4706-4715
-
-
Fresneau, P.1
Cussac, M.2
Morand, J.-M.3
Szymonski, B.4
Tranqui, D.5
Leclerc, G.6
-
24
-
-
0029000808
-
Synthesis of 3-aminorhodanine derivatives an aldose reductase inhibitors
-
Hanefeld W, Schlitzer M. Synthesis of 3-aminorhodanine derivatives an aldose reductase inhibitors. J Heterocyc Chem 1995;32:1919-1925.
-
(1995)
J Heterocyc Chem
, vol.32
, pp. 1919-1925
-
-
Hanefeld, W.1
Schlitzer, M.2
-
25
-
-
0032748147
-
Synthesis and aldose reductase inhibitory activities of novel dibenzocycloheptenone derivatives
-
Inoue J, Cui Y-S, Rodriguez L, Chen Z, Kador PF. Synthesis and aldose reductase inhibitory activities of novel dibenzocycloheptenone derivatives. Eur J Med Chem 1999;34:399-404.
-
(1999)
Eur J Med Chem
, vol.34
, pp. 399-404
-
-
Inoue, J.1
Cui, Y.-S.2
Rodriguez, L.3
Chen, Z.4
Kador, P.F.5
-
26
-
-
0025967888
-
Novel, potent aldose reductase inhibitors: 3,4-Dihydro-4-oxo-3-[[5-(trifluoromethyl)-2-benzothiazolyl] methyl]-1 phthalazineacetic acid (Zopolrestat) and congeners
-
Mylari BL, Larson ER, Beyer TA, Zembrowski WJ, Aldinger CE, Dee MF, Siegel TW, Singleton DH. Novel, potent aldose reductase inhibitors: 3,4-dihydro-4-oxo-3-[[5-(trifluoromethyl)-2-benzothiazolyl] methyl]-1 phthalazineacetic acid (Zopolrestat) and congeners. J Med Chem 1991;34:108-122.
-
(1991)
J Med Chem
, vol.34
, pp. 108-122
-
-
Mylari, B.L.1
Larson, E.R.2
Beyer, T.A.3
Zembrowski, W.J.4
Aldinger, C.E.5
Dee, M.F.6
Siegel, T.W.7
Singleton, D.H.8
-
27
-
-
0033920645
-
A potent aldose reductase inhibitor, (2S,4S)-6-fluoro-2′,5′- dioxospiro[chroman-4,4′-imidazolidine]-2-carboxamide (Fidarestat): Its absolute configuration and interactions with the aldose reductase by X-ray crystallography
-
Oka M, Matsumoto Y, Sugiyama S, Tsuruta N, Matsushima M. A potent aldose reductase inhibitor, (2S,4S)-6-fluoro-2′,5′- dioxospiro[chroman-4,4′-imidazolidine]-2-carboxamide (Fidarestat): its absolute configuration and interactions with the aldose reductase by X-ray crystallography. J Med Chem 2000;43:2479-2483.
-
(2000)
J Med Chem
, vol.43
, pp. 2479-2483
-
-
Oka, M.1
Matsumoto, Y.2
Sugiyama, S.3
Tsuruta, N.4
Matsushima, M.5
-
28
-
-
0022649150
-
Sorbinil: A member of the novel class of spirohydantoin aldose reductase inhibitors
-
Sarges R, Peterson MJ. Sorbinil: a member of the novel class of spirohydantoin aldose reductase inhibitors. Metabolism 1986;35:101-104.
-
(1986)
Metabolism
, vol.35
, pp. 101-104
-
-
Sarges, R.1
Peterson, M.J.2
-
29
-
-
2542617999
-
Human aldose reductase-inhibitor complex at 0.66Å: Experimentally observed protonation states and atomic interactions have implications for the inhibition mechanism
-
submitted
-
Howard E, Sanishvili R, Cachau RE, Mitschler A, Chevrier B, Barth P, Lamour V, Van Zandt M, Sibley E, Moras D, Schneider TR, Joachimiak A, Podjarny A. Human aldose reductase-inhibitor complex at 0.66Å: experimentally observed protonation states and atomic interactions have implications for the inhibition mechanism. Proteins, submitted.
-
Proteins
-
-
Howard, E.1
Sanishvili, R.2
Cachau, R.E.3
Mitschler, A.4
Chevrier, B.5
Barth, P.6
Lamour, V.7
Van Zandt, M.8
Sibley, E.9
Moras, D.10
Schneider, T.R.11
Joachimiak, A.12
Podjarny, A.13
-
30
-
-
2542560067
-
-
Horley, UK: Erithacus Software
-
GraFit 4.09. Horley, UK: Erithacus Software; 1989-1999.
-
(1989)
GraFit 4.09
-
-
-
32
-
-
0030599010
-
A fast flexible docking method using an incremental construction algorithm
-
Rarey M, Kramer B, Lengauer T, Klebe G. A fast flexible docking method using an incremental construction algorithm. J Mol Biol 1996;261:470-489.
-
(1996)
J Mol Biol
, vol.261
, pp. 470-489
-
-
Rarey, M.1
Kramer, B.2
Lengauer, T.3
Klebe, G.4
-
33
-
-
0030076041
-
Placement of medium sized molecular fragments into active sites of proteins
-
Rarey M, Wefing S, Lengauer T. Placement of medium sized molecular fragments into active sites of proteins. J Comput Aid Mol Des 1996;10:41-54.
-
(1996)
J Comput Aid Mol Des
, vol.10
, pp. 41-54
-
-
Rarey, M.1
Wefing, S.2
Lengauer, T.3
-
34
-
-
0011520759
-
Molecular variations based on isosteric replacements
-
Wermuth CG, editor. New York: Academic
-
Wermuth CG. Molecular variations based on isosteric replacements. In: Wermuth CG, editor. The practice of medicinal chemistry. New York: Academic; 1996.
-
(1996)
The Practice of Medicinal Chemistry
-
-
Wermuth, C.G.1
-
35
-
-
2542529632
-
-
San Leandro, CA: MDL Information Systems, Inc.
-
Available Chemicals Directory. ACD 00.1. San Leandro, CA: MDL Information Systems, Inc.; 2000.
-
(2000)
Available Chemicals Directory. ACD 00.1
-
-
-
37
-
-
0031024171
-
Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings
-
Lipinski CA, Lombardo F, Dominy BW, Feeney PJ. Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Adv Drug Deliv Rev 1997;23:3-25.
-
(1997)
Adv Drug Deliv Rev
, vol.23
, pp. 3-25
-
-
Lipinski, C.A.1
Lombardo, F.2
Dominy, B.W.3
Feeney, P.J.4
-
38
-
-
0035970295
-
SuperStar: Improved knowledge-based interaction fields for protein binding sites
-
Verdonk ML, Cole JC, Watson P, Gillet V, Willett P. SuperStar: improved knowledge-based interaction fields for protein binding sites. J Mol Biol 2001;307:841-859.
-
(2001)
J Mol Biol
, vol.307
, pp. 841-859
-
-
Verdonk, M.L.1
Cole, J.C.2
Watson, P.3
Gillet, V.4
Willett, P.5
-
39
-
-
0034645763
-
Knowledge-based scoring function to predict protein-ligand interactions
-
Gohlke H, Hendlich M, Klebe G. Knowledge-based scoring function to predict protein-ligand interactions. J Mol Biol 2000;295:337-356.
-
(2000)
J Mol Biol
, vol.295
, pp. 337-356
-
-
Gohlke, H.1
Hendlich, M.2
Klebe, G.3
-
40
-
-
0033668689
-
Predicting binding modes, binding affinities and "hot spots" for protein-ligand complexes using a knowledge-based scoring function
-
Gohlke H, Hendlich M, Klebe G. Predicting binding modes, binding affinities and "hot spots" for protein-ligand complexes using a knowledge-based scoring function. Perspect Drug Disc Des 2000;20:115-144.
-
(2000)
Perspect Drug Disc Des
, vol.20
, pp. 115-144
-
-
Gohlke, H.1
Hendlich, M.2
Klebe, G.3
-
41
-
-
0035823226
-
SuperStar: Comparison of CSD and PDB-based interaction fields as a basis for the prediction of protein-ligand interactions
-
Boer DR, Kroon J, Cole JC, Smith B, Verdonk ML. SuperStar: comparison of CSD and PDB-based interaction fields as a basis for the prediction of protein-ligand interactions. J Mol Biol 2001;312:275-287.
-
(2001)
J Mol Biol
, vol.312
, pp. 275-287
-
-
Boer, D.R.1
Kroon, J.2
Cole, J.C.3
Smith, B.4
Verdonk, M.L.5
-
43
-
-
0033566211
-
Evaluation of PMF scoring in docking weak ligands to the FK506 binding protein
-
Muegge I, Martin YC, Hajduk PJ, Fesik SW. Evaluation of PMF scoring in docking weak ligands to the FK506 binding protein. J Med Chem 1999;42:2498-2503.
-
(1999)
J Med Chem
, vol.42
, pp. 2498-2503
-
-
Muegge, I.1
Martin, Y.C.2
Hajduk, P.J.3
Fesik, S.W.4
-
45
-
-
2542538674
-
Consideration of molecular weight during compound selection in virtual target-based database screening
-
Pan Y, Huang N, Cho S, MacKerell ADJ. Consideration of molecular weight during compound selection in virtual target-based database screening. J Chem Inf Comput Sci 2002;42.
-
(2002)
J Chem Inf Comput Sci
, pp. 42
-
-
Pan, Y.1
Huang, N.2
Cho, S.3
MacKerell, A.D.J.4
-
46
-
-
0035942512
-
Discovery of novel aldose reductase inhibitors using a protein structure-based approach: 3D-database search followed by design and synthesis
-
Iwata Y, Arisawa M, Hamada R, Kita Y, Mizutani MY, Tomioka N, Itai A, Miyamoto S. Discovery of novel aldose reductase inhibitors using a protein structure-based approach: 3D-database search followed by design and synthesis. J Med Chem 2001;44:1718-1728.
-
(2001)
J Med Chem
, vol.44
, pp. 1718-1728
-
-
Iwata, Y.1
Arisawa, M.2
Hamada, R.3
Kita, Y.4
Mizutani, M.Y.5
Tomioka, N.6
Itai, A.7
Miyamoto, S.8
-
47
-
-
0036191826
-
Discovery of new inhibitors of aldose reductase from molecular docking and database screening
-
Rastelli G, Ferrari AM, Costantino L, Gamberini MC. Discovery of new inhibitors of aldose reductase from molecular docking and database screening. Bioorg Med Chem 2002;10:1437-1450.
-
(2002)
Bioorg Med Chem
, vol.10
, pp. 1437-1450
-
-
Rastelli, G.1
Ferrari, A.M.2
Costantino, L.3
Gamberini, M.C.4
-
48
-
-
0037103119
-
Successful virtual screening for novel inhibitors of human carbonic anhydrase: Strategy and experimental confirmation
-
Gruneberg S, Stubbs MT, Klebe G. Successful virtual screening for novel inhibitors of human carbonic anhydrase: strategy and experimental confirmation. J Med Chem 2002;45:3588-3602.
-
(2002)
J Med Chem
, vol.45
, pp. 3588-3602
-
-
Gruneberg, S.1
Stubbs, M.T.2
Klebe, G.3
-
49
-
-
0036523371
-
De novo design, synthesis, and in vitro evaluation of inhibitors for prokaryotic tRNA-guanine transglycosylase: A dramatic sulfur effect on binding affinity
-
Meyer EA, Brenk R, Castellano RK, Furler M, Klebe G, Diederich F. De novo design, synthesis, and in vitro evaluation of inhibitors for prokaryotic tRNA-guanine transglycosylase: a dramatic sulfur effect on binding affinity. ChemBiochem 2002;3:250-253.
-
(2002)
ChemBiochem
, vol.3
, pp. 250-253
-
-
Meyer, E.A.1
Brenk, R.2
Castellano, R.K.3
Furler, M.4
Klebe, G.5
Diederich, F.6
-
51
-
-
31444452744
-
Automatic generation of 3 D-atomic coordinates for organic molecules
-
Gasteiger J, Rudoph, C., Sadowski, J. Automatic generation of 3 D-atomic coordinates for organic molecules. Tetrahedron Comput Methodol 1990;3:537-547.
-
(1990)
Tetrahedron Comput Methodol
, vol.3
, pp. 537-547
-
-
Gasteiger, J.1
Rudoph, C.2
Sadowski, J.3
|