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Volumn 32, Issue 4, 2004, Pages 1610-1614

A theophylline responsive riboswitch based on helix slipping controls gene expression in vivo

Author keywords

[No Author keywords available]

Indexed keywords

APTAMER; RNA; THEOPHYLLINE;

EID: 2542601538     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkh321     Document Type: Article
Times cited : (208)

References (30)
  • 1
    • 0037206833 scopus 로고    scopus 로고
    • Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression
    • Winkler,W., Nahvi,A. and Breaker,R.R. (2002) Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression. Nature, 419, 952-956.
    • (2002) Nature , vol.419 , pp. 952-956
    • Winkler, W.1    Nahvi, A.2    Breaker, R.R.3
  • 5
    • 0042320361 scopus 로고    scopus 로고
    • An mRNA structure that controls gene expression by binding S-adenosylmethionine
    • Winkler,W.C., Nahvi,A., Sudarsan,N., Barrick,J.E. and Breaker,R.R. (2003) An mRNA structure that controls gene expression by binding S-adenosylmethionine. Nat. Struct. Biol., 10, 701-707.
    • (2003) Nat. Struct. Biol. , vol.10 , pp. 701-707
    • Winkler, W.C.1    Nahvi, A.2    Sudarsan, N.3    Barrick, J.E.4    Breaker, R.R.5
  • 6
    • 0038476616 scopus 로고    scopus 로고
    • The riboswitch-mediated control of sulfur metabolism in bacteria
    • Epshtein,V., Mironov,A.S. and Nudler,E. (2003) The riboswitch-mediated control of sulfur metabolism in bacteria. Proc. Natl Acad. Sci. USA, 100, 5052-5056.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 5052-5056
    • Epshtein, V.1    Mironov, A.S.2    Nudler, E.3
  • 7
    • 0242298623 scopus 로고    scopus 로고
    • An mRNA structure in bacteria that controls gene expression by binding lysine
    • Sudarsan,N., Wickiser,J.K., Nakamura,S., Ebert,M.S. and Breaker,R.R. (2003) An mRNA structure in bacteria that controls gene expression by binding lysine. Genes Dev., 17, 2688-2697.
    • (2003) Genes Dev. , vol.17 , pp. 2688-2697
    • Sudarsan, N.1    Wickiser, J.K.2    Nakamura, S.3    Ebert, M.S.4    Breaker, R.R.5
  • 8
    • 0038210214 scopus 로고    scopus 로고
    • Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria
    • Mandal,M., Boese,B., Barrick,J.E., Winkler,W.C. and Breaker,R.R. (2003) Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria. Cell, 113, 577-586.
    • (2003) Cell , vol.113 , pp. 577-586
    • Mandal, M.1    Boese, B.2    Barrick, J.E.3    Winkler, W.C.4    Breaker, R.R.5
  • 9
    • 0142075327 scopus 로고    scopus 로고
    • Genetic control by metabolite-binding riboswitches
    • Winkler,W.C. and Breaker,R.R.(2003) Genetic control by metabolite-binding riboswitches. Chembiochem., 4, 1024-1032.
    • (2003) Chembiochem. , vol.4 , pp. 1024-1032
    • Winkler, W.C.1    Breaker, R.R.2
  • 10
    • 1242320304 scopus 로고    scopus 로고
    • Coenzyme B12 riboswitches are widespread genetic control elements in prokaryotes
    • Nahvi,A., Barrick,J.E. and Breaker,R.R. (2004) Coenzyme B12 riboswitches are widespread genetic control elements in prokaryotes. Nucleic, Acids Res., 32, 143-150.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 143-150
    • Nahvi, A.1    Barrick, J.E.2    Breaker, R.R.3
  • 11
    • 0346687595 scopus 로고    scopus 로고
    • The riboswitch control of bacterial metabolism
    • Nudler,E. and Mironov,A.S. (2004) The riboswitch control of bacterial metabolism. Trends Biochem. Sci., 29, 11-17.
    • (2004) Trends Biochem. Sci. , vol.29 , pp. 11-17
    • Nudler, E.1    Mironov, A.S.2
  • 12
    • 0038136962 scopus 로고    scopus 로고
    • Metabolite-binding RNA domains are present in the genes of eukaryotes
    • Sudarsan,N., Barrick,J.E. and Breaker,R.R. (2003) Metabolite-binding RNA domains are present in the genes of eukaryotes. RNA, 9, 644-647.
    • (2003) RNA , vol.9 , pp. 644-647
    • Sudarsan, N.1    Barrick, J.E.2    Breaker, R.R.3
  • 14
    • 0034603154 scopus 로고    scopus 로고
    • Adaptive recognition by nucleic acid aptamers
    • Hermann,T. and Patel,D.J. (2000) Adaptive recognition by nucleic acid aptamers. Science, 287, 820-825.
    • (2000) Science , vol.287 , pp. 820-825
    • Hermann, T.1    Patel, D.J.2
  • 15
    • 0032500736 scopus 로고    scopus 로고
    • Controlling gene expression in living cells through small molecule-RNA interactions
    • Werstuck,G. and Green,M.R. (1998) Controlling gene expression in living cells through small molecule-RNA interactions. Science, 282, 296-298.
    • (1998) Science , vol.282 , pp. 296-298
    • Werstuck, G.1    Green, M.R.2
  • 16
    • 0036235684 scopus 로고    scopus 로고
    • Inhibition of translation by RNA-small molecule interactions
    • Harvey,I., Garneau,P. and Pelletier,J. (2002) Inhibition of translation by RNA-small molecule interactions. RNA, 8, 452-463.
    • (2002) RNA , vol.8 , pp. 452-463
    • Harvey, I.1    Garneau, P.2    Pelletier, J.3
  • 17
    • 0037388001 scopus 로고    scopus 로고
    • Conditional gene expression by controlling translation with tetracycline-binding aptamers
    • Suess,B., Hanson,S., Berens,C., Fink,B., Schroeder,R. and Hillen,W. (2003) Conditional gene expression by controlling translation with tetracycline-binding aptamers. Nucleic Acids Res., 31, 1853-1858.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 1853-1858
    • Suess, B.1    Hanson, S.2    Berens, C.3    Fink, B.4    Schroeder, R.5    Hillen, W.6
  • 19
    • 0033061571 scopus 로고    scopus 로고
    • Initiation of translation in prokaryotes and eukaryotes
    • Kozak,M. (1999) Initiation of translation in prokaryotes and eukaryotes. Gene, 234, 187-208.
    • (1999) Gene , vol.234 , pp. 187-208
    • Kozak, M.1
  • 20
    • 0024986686 scopus 로고
    • Control of prokaryotic translational initiation by mRNA secondary structure
    • deSmit,M.H. and van Duin,J. (1990) Control of prokaryotic translational initiation by mRNA secondary structure. Prog. Nucleic Acid Res. Mol. Biol., 38, 1-35.
    • (1990) Prog. Nucleic Acid Res. Mol. Biol. , vol.38 , pp. 1-35
    • deSmit, M.H.1    van Duin, J.2
  • 21
    • 0025166089 scopus 로고
    • Secondary structure of the ribosome binding site determines translational efficiency: A quantitative analysis
    • deSmit,M.H. and van Duin,J. (1990) Secondary structure of the ribosome binding site determines translational efficiency: a quantitative analysis. Proc. Natl Acad. Sci. USA, 87, 7668-7672.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 7668-7672
    • deSmit, M.H.1    van Duin, J.2
  • 22
    • 0028036559 scopus 로고
    • Control of translation by mRNA secondary structure in Escherichia coli. A quantitative analysis of literature data
    • deSmit,M.H. and van Duin,J. (1994) Control of translation by mRNA secondary structure in Escherichia coli. A quantitative analysis of literature data. J. Mol. Biol., 244, 144-150.
    • (1994) J. Mol. Biol. , vol.244 , pp. 144-150
    • deSmit, M.H.1    van Duin, J.2
  • 23
    • 0033616774 scopus 로고    scopus 로고
    • Engineering precision RNA molecular switches
    • Soukup,G.A. and Breaker,R.R. (1999) Engineering precision RNA molecular switches. Proc. Natl Acad. Sci. USA, 96, 3584-3589.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 3584-3589
    • Soukup, G.A.1    Breaker, R.R.2
  • 24
    • 0037377340 scopus 로고    scopus 로고
    • Rube Goldberg goes (ribo)nuclear? Molecular switches and sensors made from RNA
    • Silverman,S.K. (2003) Rube Goldberg goes (ribo)nuclear? Molecular switches and sensors made from RNA. RNA, 9, 377-383.
    • (2003) RNA , vol.9 , pp. 377-383
    • Silverman, S.K.1
  • 25
    • 0028224199 scopus 로고
    • High-resolution molecular discrimination by RNA
    • Jenison,R.D., Gill,S.C., Pardi,A and Poliski,B. (1994) High-resolution molecular discrimination by RNA. Science, 263, 1425-1429.
    • (1994) Science , vol.263 , pp. 1425-1429
    • Jenison, R.D.1    Gill, S.C.2    Pardi, A.3    Poliski, B.4
  • 26
    • 0028264818 scopus 로고
    • Catabolite repression of the Bacillus subtilis xyl operon involves a cis element functional in the context of an unrelated sequence and glucose exerts additional xylR-dependent repression
    • Kraus,A., Hueck,C., Gärtner,D. and Hillen,W. (1994) Catabolite repression of the Bacillus subtilis xyl operon involves a cis element functional in the context of an unrelated sequence and glucose exerts additional xylR-dependent repression. J. Bacteriol., 176, 1738-1745.
    • (1994) J. Bacteriol. , vol.176 , pp. 1738-1745
    • Kraus, A.1    Hueck, C.2    Gärtner, D.3    Hillen, W.4
  • 27
    • 0024042175 scopus 로고
    • Expression of the Bacillus subtilis xyl operon is repressed at the level of transcription and is induced by xylose
    • Gärtner,D., Geissendörfer,M. and Hillen,W. (1988) Expression of the Bacillus subtilis xyl operon is repressed at the level of transcription and is induced by xylose. J. Bacteriol., 170, 3102-3109.
    • (1988) J. Bacteriol. , vol.170 , pp. 3102-3109
    • Gärtner, D.1    Geissendörfer, M.2    Hillen, W.3
  • 28
    • 0003785155 scopus 로고
    • Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Miller,J.H. (1972) Experiments in Molecular Genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1972) Experiments in Molecular Genetics
    • Miller, J.H.1
  • 29
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker,M. (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res., 31, 3406-3415.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1
  • 30
    • 0011343769 scopus 로고
    • How ribosomes select initiator regions in mRNA: Base pair formation between the 3′ terminus of 16S rRNA and the mRNA during initiation of protein synthesis in Escherichia coli
    • Steitz,J.A. and Jakes,K. (1975) How ribosomes select initiator regions in mRNA: base pair formation between the 3′ terminus of 16S rRNA and the mRNA during initiation of protein synthesis in Escherichia coli. Proc. Natl Acad. Sci. USA, 72, 4734-4738.
    • (1975) Proc. Natl. Acad. Sci. USA , vol.72 , pp. 4734-4738
    • Steitz, J.A.1    Jakes, K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.