UV resonance raman spectroscopy of DNA and protein constituents of viruses: Assignments and cross sections for excitations at 257, 244, 238, and 229 nm

Biopolymers

Volumn 45, Issue 3, 1998, Pages 247-256

  Wen, Zai Qing ^a   Thomas Jr , George J ^a  

^a UNIVERSITY OF MISSOURI KANSAS CITY   (United States)

Author keywords

Aromatic amino acid; Deoxynucleoside; DNA; Hypochromism; Protein; Raman cross section; Uv resonance raman spectroscopy; Virus assembly

Indexed keywords

AMINO ACIDS; AROMATIC COMPOUNDS; DNA; HEAVY WATER; PROTEINS; RAMAN SPECTROSCOPY; ULTRAVIOLET SPECTROSCOPY;

HYPOCHROMISM;

VIRUSES;

VIRUS DNA; VIRUS PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; DNA DETERMINATION; DNA STRUCTURE; NONHUMAN; RAMAN SPECTROMETRY; STRUCTURE ANALYSIS;

DEOXYADENOSINES; DEOXYCYTIDINE; DEOXYGUANOSINE; DNA VIRUSES; DNA, VIRAL; PHENYLALANINE; SPECTROPHOTOMETRY, ULTRAVIOLET; SPECTRUM ANALYSIS, RAMAN; SULFATES; THYMIDINE; TRYPTOPHAN; TYROSINE; VIRAL PROTEINS;

DNA VIRUSES;

EID: 2542544330     PISSN: 00063525     EISSN: None     Source Type: Journal    
DOI: 10.1002/(sici)1097-0282(199803)45:3<247::aid-bip7>3.0.co;2-r     Document Type: Article

References (44)

1. Overman, S. A., Tsuboi, M. & Thomas, G. J., Jr. (1996) J. Mol. Biol. 259, 331-336.
2. Tsuboi, M., Overman, S. A. & Thomas, G. J., Jr. (1996) Biochemistry 35, 10403-10410.
3. Takeuchi, H., Matsuno, M., Overman, S. A. & Thomas, G. J., Jr. (1996) J. Am. Chem. Soc. 118, 3498-3507.
4. Tuma, R., Prevelige, P. E., Jr. & Thomas, G. J., Jr. (1996) Biochemistry 35, 4619-4627.
5. Tuma, R., Bamford, J. H. K., Bamford, D. H., Russell, M. P. & Thomas, G. J., Jr. (1996) J. Mol. Biol. 257, 87-101.
6. Tuma, R., Bamford, J. H. K., Bamford, D. H. & Thomas, G. J., Jr. (1996) J. Mol. Biol. 257, 102-115.
7. Li, T., Johnson, J. E. & Thomas, G. J., Jr. (1993) Biophys. J. 65, 1963-1972.
8. Reilly, K. E. & Thomas, G. J., Jr. (1994) J. Mol. Biol. 241, 68-82.
9. Tuma, R. & Thomas, G. J., Jr. (1996) Biophys. J. 71, 3454-3466.
10. Wen, Z. Q., Overman, S. A. & Thomas, G. J., Jr. (1997) Biochemistry 36, 7810-7820.
11. Harada, I. & Takeuchi, H. (1986) in Advances in Infrared and Raman Spectroscopy, Vol. 13, Clark, R. J. H. & Hester, R. E., Eds., Wiley, New York, pp. 113-175.
12. Tsuboi, M., Nishimura, Y., Hirakawa, A. Y. & Peticolas, W. L. (1987) in Biological Applications of Raman Spectroscopy, Vol. 2, Spiro, T. G., Ed., Wiley - Interscience, New York, pp. 109-179.
13. Thomas, G. J., Jr. & Tsuboi, M. (1993) Adv. Biophys. Chem. 3, 1-70.
14. Asher, S. A. (1993) Anal. Chem. 65, 59A-66A.
15. Asher, S. A. (1993) Anal. Chem. 65, 201A-210A.
16. Austin, J. C., Jordan, T. & Spiro, T. G. (1993) in Advances in Spectroscopy, Vol. 20A, Clark, R. J. H. & Hester, R. E., Eds., Wiley & Sons, London, pp. 55-127.
17. Russell, M. P., Vohnik, S. & Thomas, G. J., Jr. (1995) Biophys. J. 68, 1607-1612.
18. Wen, Z. Q. & Thomas, G. J., Jr. (1998) submitted.
19. Kubasek, W. L., Hudson, B. & Peticolas, W. L. (1985) Proc. Natl Acad. Sci. USA 82, 2369-2373.
20. Fodor, S. P. A., Rava, R. P., Hays, T. R. & Spiro, T. G. (1985) J. Am. Chem. Soc. 107, 1520-1529.
21. Toyama, A., Takino, Y., Takeuchi, H. & Harada, I. (1993) J. Am. Chem. Soc. 115, 11092-11098.
22. Fodor, S. P. A. & Spiro, T. G. (1986) J. Am. Chem. Soc. 108, 3198-3205.
23. Perno, J. R., Grygon, C. A. & Spiro, T. G. (1989) J. Phys. Chem. 93, 5672-5678.
24. Rava, R. P. & Spiro, T. G. (1985) J. Phys. Chem. 89, 1856-1861.
25. Fodor, S. P. A., Copeland, R. A., Grygon, C. A. & Spiro, T. G. (1989) J. Am. Chem. Soc. 111, 5509-5518.
26. Su, C., Wang, Y. & Spiro, T. G. (1990) J. Raman Spectrosc. 21, 435-440.
27. Asher, S. A., Ludwig, M. & Johnson, C. R. (1986) J. Am. Chem. Soc. 108, 3186-3197.
28. Ludwig, M. & Asher, S. A. (1988) J. Am. Chem. Soc. 110, 1005-1011.
29. Sweeney, J. A. & Asher, S. A. (1990) J. Phys. Chem. 89, 4784-4791.
30. Asher, S. A., Bormett, R. W., Chen, X. G., Lemmon, D. H., Cho, N., Peterson, P., Arrigoni, M., Spinelli, L. & Cannon, J. (1993) Appl. Spectrosc. 47, 628-633.
31. Kaminaka, S. & Kitagawa, T. (1992) Appl. Spectrosc. 46, 1804-1808.
32. Cho, N., Song, S. & Asher, S. A. (1994) Biochemistry 33, 5932-5941.
33. Dawson, R. M. C., Elliott, D. C., Elliott, W. H. & Jones, K. M. (1986). Data For Biochemical Research, 3rd ed., Oxford University Press, New York.
34. Dudik, J. M., Johnson, C. R. & Asher, S. F. (1986) J. Chem. Phys. 82, 1732-1740.
35. Lord, R. C. & Thomas, G. J., Jr. (1967) Spectrochim. Acta 23A, 2551-2591.
36. Tsuboi, M. & Takahashi, S. (1973) in Physico-Chemical Properties of Nucleic Acids, Vol. 2, Duchesne, J., Ed., Academic Press, London, pp. 91-145.
37. Tsuboi, M., Komatsu, M., Hoshi, J., Kawashima, E., Sekine, T., Ishido, Y., Russell, M. P., Benevides, J. M. & Thomas, G. J., Jr. (1997) J. Am. Chem. Soc. 119, 2025-2032.
38. Toyama, A., Takeuchi, H. & Harada, I. (1991) J. Mol. Struct. 242, 87-98.
39. Thomas, G. J., Jr. & Livramento, J. (1975) Biochemistry 14, 5210-5218.
40. Lane, M. J. & Thomas, G. J., Jr. (1979) Biochemistry 18, 3839-3846.
41. Miura, T. & Thomas, G. J., Jr. (1995) Biochemistry 34, 9645-9654.
42. Johnson, C. R., Ludwig, M. & Asher, S. A. (1986) J. Am. Chem. Soc. 108, 905-912.
43. Teraoka, J., Harmon, P. A. & Asher, S. A. (1990) J. Am. Chem. Soc. 112, 2892-2900.
44. Harmon, P. A., Teraoka, J. & Asher, S. A. (1990) J. Am. Chem. Soc. 112, 8789-8799.