메뉴 건너뛰기




Volumn 43, Issue 21, 2004, Pages 6679-6690

Role of binding site loops in controlling nitric oxide release: Structure and kinetics of mutant forms of nitrophorin 4

Author keywords

[No Author keywords available]

Indexed keywords

CONFORMATIONS; NITROGEN COMPOUNDS; PH EFFECTS; PROTEINS; REACTION KINETICS; SPECTROSCOPIC ANALYSIS; TISSUE;

EID: 2542528641     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi049748a     Document Type: Article
Times cited : (62)

References (39)
  • 1
    • 0036513249 scopus 로고    scopus 로고
    • Does nitric oxide modulate mitochondrial energy generation and apoptosis?
    • Moncada, S., and Erusalimsky, J. D. (2002) Does nitric oxide modulate mitochondrial energy generation and apoptosis? Nat. Rev. Mol. Cell Biol. 3, 214-220.
    • (2002) Nat. Rev. Mol. Cell Biol. , vol.3 , pp. 214-220
    • Moncada, S.1    Erusalimsky, J.D.2
  • 2
    • 0027975453 scopus 로고
    • Nitric oxide: A physiologic messenger molecule
    • Bredt, D. S., and Snyder, S. H. (1994) Nitric oxide: A physiologic messenger molecule, Annu. Rev. Biochem. 63, 175-195.
    • (1994) Annu. Rev. Biochem. , vol.63 , pp. 175-195
    • Bredt, D.S.1    Snyder, S.H.2
  • 3
    • 0032930417 scopus 로고    scopus 로고
    • Mammalian nitric oxide synthases
    • Stuehr, D. J. (1999) Mammalian nitric oxide synthases, Biochim. Biophys. Acta 1411, 217-230.
    • (1999) Biochim. Biophys. Acta , vol.1411 , pp. 217-230
    • Stuehr, D.J.1
  • 5
    • 0033377046 scopus 로고    scopus 로고
    • Studying the structure and regulation of soluble guanylyl cyclase
    • Koesling, D. (1999) Studying the structure and regulation of soluble guanylyl cyclase, Methods 19, 485-493.
    • (1999) Methods , vol.19 , pp. 485-493
    • Koesling, D.1
  • 6
    • 0033561108 scopus 로고    scopus 로고
    • A new decoration for nitric oxide synthase: A Zn(Cys)4 site
    • Ludwig, M. L., and Marletta, M. A. (1999) A new decoration for nitric oxide synthase: a Zn(Cys)4 site, Struct. Folding Des. 7, R73-R79.
    • (1999) Struct. Folding Des. , vol.7
    • Ludwig, M.L.1    Marletta, M.A.2
  • 7
    • 0027213409 scopus 로고
    • Reversible binding of nitric oxide by a salivary heme protein from a bloodsucking insect
    • Ribeiro, J. M. C., Hazzard, J. M. H., Nussenzveig, R. H., Champagne, D. E., and Walker, F. A. (1993) Reversible binding of nitric oxide by a salivary heme protein from a bloodsucking insect. Science 260, 539-541.
    • (1993) Science , vol.260 , pp. 539-541
    • Ribeiro, J.M.C.1    Hazzard, J.M.H.2    Nussenzveig, R.H.3    Champagne, D.E.4    Walker, F.A.5
  • 8
    • 0032170312 scopus 로고    scopus 로고
    • Purification and cloning of the salivary nitrophorin from the hemipteran Cimex lectularius
    • Valenzuela, J. G., and Ribeiro, J. M. C. (1998) Purification and cloning of the salivary nitrophorin from the hemipteran Cimex lectularius, J. Exp. Biol. 201, 2659-2664.
    • (1998) J. Exp. Biol. , vol.201 , pp. 2659-2664
    • Valenzuela, J.G.1    Ribeiro, J.M.C.2
  • 9
    • 0028947447 scopus 로고
    • Purification, partial characterization and cloning of nitric oxide-carrying heme proteins (nitrophorins) from salivary glands of the blood-sucking insect Rhodnius prolixus
    • Champagne, D. E., Nussenzvieg, R. H., and Ribeiro, J. M. C. (1995) Purification, partial characterization and cloning of nitric oxide-carrying heme proteins (nitrophorins) from salivary glands of the blood-sucking insect Rhodnius prolixus, J. Biol. Chem. 270, 8691-8695.
    • (1995) J. Biol. Chem. , vol.270 , pp. 8691-8695
    • Champagne, D.E.1    Nussenzvieg, R.H.2    Ribeiro, J.M.C.3
  • 10
    • 0037211411 scopus 로고    scopus 로고
    • Changes in salivary nitrophorin profile during the life cycle of the blood-sucking bug Rhodnius prolixus
    • Moreira, M. F., Coelho, H. S., Zingali, R. B., Oliveira, P. L., and Masuda, H. (2003) Changes in salivary nitrophorin profile during the life cycle of the blood-sucking bug Rhodnius prolixus, Insect Biochem. Mol. Biol. 33, 23-28.
    • (2003) Insect Biochem. Mol. Biol. , vol.33 , pp. 23-28
    • Moreira, M.F.1    Coelho, H.S.2    Zingali, R.B.3    Oliveira, P.L.4    Masuda, H.5
  • 11
    • 0028029463 scopus 로고
    • High affinity histamine-binding and antihistaminic activity of the salivary nitric oxide-carrying heme protein (nitrophorin) of Rhodnius prolixus
    • Ribeiro, J. M. C., and Walker, F. A. (1994) High affinity histamine-binding and antihistaminic activity of the salivary nitric oxide-carrying heme protein (nitrophorin) of Rhodnius prolixus, J. Exp. Med. 180, 2251-2257.
    • (1994) J. Exp. Med. , vol.180 , pp. 2251-2257
    • Ribeiro, J.M.C.1    Walker, F.A.2
  • 12
    • 0032029865 scopus 로고    scopus 로고
    • Characterization and cDNA cloning of a hemoprotein in the salivary glands of the blood-sucking insect, Rhodnius prolixus
    • Sun, J., Yuda, M., Miura, K., and Chinzei, Y. (1998) Characterization and cDNA cloning of a hemoprotein in the salivary glands of the blood-sucking insect, Rhodnius prolixus, Insect Biochem. Mol. Biol. 28, 191-200.
    • (1998) Insect Biochem. Mol. Biol. , vol.28 , pp. 191-200
    • Sun, J.1    Yuda, M.2    Miura, K.3    Chinzei, Y.4
  • 13
    • 9244254265 scopus 로고    scopus 로고
    • Purification, characterization and cDNA cloning of a novel anticoagulant of the intrinsic pathway (prolixin-S) from salivary glands of the blood sucking bug, Rhodnius prolixus
    • Sun, J., Yamaguchi, M., Yuda, M., Miura, K., Takeya, H., Hirai, M., Matsuoka, H., Ando, K., Watanabe, T., Suzuki, K., and Chinzei, Y. (1996) Purification, characterization and cDNA cloning of a novel anticoagulant of the intrinsic pathway (prolixin-S) from salivary glands of the blood sucking bug, Rhodnius prolixus, Thromb. Haemostasis 75, 573-577.
    • (1996) Thromb. Haemostasis , vol.75 , pp. 573-577
    • Sun, J.1    Yamaguchi, M.2    Yuda, M.3    Miura, K.4    Takeya, H.5    Hirai, M.6    Matsuoka, H.7    Ando, K.8    Watanabe, T.9    Suzuki, K.10    Chinzei, Y.11
  • 14
    • 0030993345 scopus 로고    scopus 로고
    • Nitric oxide binding and crystallization of recombinant nitrophorin I, a nitric oxide transport protein from the blood-sucking bug Rhodnius prolixus
    • Andersen, J. F., Champagne, D. E., Weichsel, A., Ribeiro, J. M. C., Balfour, C. A., Dress, V., and Montfort, W. R. (1997) Nitric oxide binding and crystallization of recombinant nitrophorin I, a nitric oxide transport protein from the blood-sucking bug Rhodnius prolixus, Biochemistry 36, 4423-4428.
    • (1997) Biochemistry , vol.36 , pp. 4423-4428
    • Andersen, J.F.1    Champagne, D.E.2    Weichsel, A.3    Ribeiro, J.M.C.4    Balfour, C.A.5    Dress, V.6    Montfort, W.R.7
  • 15
    • 0034702817 scopus 로고    scopus 로고
    • Kinetics and equilibria in ligand binding by nitrophorins 1-4: Evidence for stabilization of a NO-ferriheme complex through a ligand-induced conformational trap
    • Andersen, J. F., Ding, X. D., Balfour, C., Shokhireva, T. K., Champagne, D. E., Walker, F. A., and Montfort, W. R. (2000) Kinetics and equilibria in ligand binding by nitrophorins 1-4: Evidence for stabilization of a NO-ferriheme complex through a ligand-induced conformational trap, Biochemistry 39, 10118-10131.
    • (2000) Biochemistry , vol.39 , pp. 10118-10131
    • Andersen, J.F.1    Ding, X.D.2    Balfour, C.3    Shokhireva, T.K.4    Champagne, D.E.5    Walker, F.A.6    Montfort, W.R.7
  • 16
    • 0032946091 scopus 로고    scopus 로고
    • Kinetic analysis on nitric oxide binding of recombinant Prolixin-S, a nitric oxide transport protein from the bloodsucking bug, Rhodnius prolixus
    • Kaneko, Y., Yuda, M., Iio, T., Murase, T., and Chinzei, Y. (1999) Kinetic analysis on nitric oxide binding of recombinant Prolixin-S, a nitric oxide transport protein from the bloodsucking bug, Rhodnius prolixus, Biochim. Biophys. Acta 1431, 492-499.
    • (1999) Biochim. Biophys. Acta , vol.1431 , pp. 492-499
    • Kaneko, Y.1    Yuda, M.2    Iio, T.3    Murase, T.4    Chinzei, Y.5
  • 17
    • 0033550489 scopus 로고    scopus 로고
    • Nitric oxide binding to the ferri- and ferroheme states of nitrophorin 1, a reversible NO-binding heme protein from the saliva of the blood-sucking insect, Rhodnius prolixus
    • Ding, X. D., Weichsel, A., Andersen, J. F., Shokhireva, T. K., Balfour, C., Pierik, A. J., Averill, B. A., Montfort, W. R., and Walker, F. A. (1999) Nitric oxide binding to the ferri- and ferroheme states of nitrophorin 1, a reversible NO-binding heme protein from the saliva of the blood-sucking insect, Rhodnius prolixus, J. Am. Chem. Soc. 121, 128-138.
    • (1999) J. Am. Chem. Soc. , vol.121 , pp. 128-138
    • Ding, X.D.1    Weichsel, A.2    Andersen, J.F.3    Shokhireva, T.K.4    Balfour, C.5    Pierik, A.J.6    Averill, B.A.7    Montfort, W.R.8    Walker, F.A.9
  • 18
    • 0035965691 scopus 로고    scopus 로고
    • Resonance Raman spectroscopic study of nitrophorin 1, a nitric oxide-binding heme protein from Rhodnius prolixus, and its nitrosyl and cyano adducts
    • Maes, E. M., Walker, F. A., Montfort, W. R., and Czernuszewicz, R. S. (2001) Resonance Raman spectroscopic study of nitrophorin 1, a nitric oxide-binding heme protein from Rhodnius prolixus, and its nitrosyl and cyano adducts, J. Am. Chem. Soc. 123, 11664-11672.
    • (2001) J. Am. Chem. Soc. , vol.123 , pp. 11664-11672
    • Maes, E.M.1    Walker, F.A.2    Montfort, W.R.3    Czernuszewicz, R.S.4
  • 19
    • 0034730723 scopus 로고    scopus 로고
    • Crystal structures of nitrophorin 2: A trifunctional antihemostatic protein from the saliva of Rhodnius prolixus
    • Andersen, J. F., and Montfort, W. R. (2000) Crystal structures of nitrophorin 2: A trifunctional antihemostatic protein from the saliva of Rhodnius prolixus, J. Biol. Chem. 275, 30496-30503.
    • (2000) J. Biol. Chem. , vol.275 , pp. 30496-30503
    • Andersen, J.F.1    Montfort, W.R.2
  • 20
    • 0033918403 scopus 로고    scopus 로고
    • Reversible nitric oxide binding to nitrophorin 4 from Rhodnius prolixus involves complete distal pocket burial
    • Weichsel, A., Andersen, J. F., Roberts, S. A., and Montfort, W. R. (2000) Reversible nitric oxide binding to nitrophorin 4 from Rhodnius prolixus involves complete distal pocket burial, Nat. Struct. Biol. 7, 551-554.
    • (2000) Nat. Struct. Biol. , vol.7 , pp. 551-554
    • Weichsel, A.1    Andersen, J.F.2    Roberts, S.A.3    Montfort, W.R.4
  • 22
    • 0035949448 scopus 로고    scopus 로고
    • Ligand-induced heme ruffling and bent NO geometry in ultra-high resolution structures of nitrophorin 4
    • Roberts, S. A., Weichsel, A., Qiu, Y., Shelnutt, J. A., Walker, F. A., and Montfort, W. R. (2001) Ligand-induced heme ruffling and bent NO geometry in ultra-high resolution structures of nitrophorin 4, Biochemistry 40, 11327-11337,
    • (2001) Biochemistry , vol.40 , pp. 11327-11337
    • Roberts, S.A.1    Weichsel, A.2    Qiu, Y.3    Shelnutt, J.A.4    Walker, F.A.5    Montfort, W.R.6
  • 23
    • 0032532483 scopus 로고    scopus 로고
    • The crystal structure of nitrophorin 4 at 1.5 Å resolution: Transport of nitric oxide by a lipocalin-based heme protein
    • Andersen, J. F., Weichsel, A., Balfour, C. A., Champagne, D. E., and Montfort, W. R. (1998) The crystal structure of nitrophorin 4 at 1.5 Å resolution: Transport of nitric oxide by a lipocalin-based heme protein, Structure 6, 1315-1327.
    • (1998) Structure , vol.6 , pp. 1315-1327
    • Andersen, J.F.1    Weichsel, A.2    Balfour, C.A.3    Champagne, D.E.4    Montfort, W.R.5
  • 24
    • 0034684238 scopus 로고    scopus 로고
    • Nitrophorins and related antihemostatic lipocalins from Rhodnius prolixus and other blood-sucking arthropods
    • Montfort, W. R., Weichsel, A., and Andersen, I. F. (2000) Nitrophorins and related antihemostatic lipocalins from Rhodnius prolixus and other blood-sucking arthropods, Biochim. Biophys. Acta 1482, 110-118.
    • (2000) Biochim. Biophys. Acta , vol.1482 , pp. 110-118
    • Montfort, W.R.1    Weichsel, A.2    Andersen, I.F.3
  • 25
    • 0000064601 scopus 로고    scopus 로고
    • (Mauk, G., and Sykes, A. G., Eds.), Academic Press, San Diego
    • Walker, F. A., and Montfort, W. R. (2000) in Advances in Inorganic Chemistry (Mauk, G., and Sykes, A. G., Eds.) pp 295-358, Academic Press, San Diego.
    • (2000) Advances in Inorganic Chemistry , pp. 295-358
    • Walker, F.A.1    Montfort, W.R.2
  • 26
    • 0037389596 scopus 로고    scopus 로고
    • Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin 2: Stability, structure, and dynamics of axial ligand complexes
    • Shokhireva, T., Berry, R. E., Uno, E., Balfour, C. A., Zhang, H., and Walker, F. A. (2003) Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin 2: stability, structure, and dynamics of axial ligand complexes, Proc. Natl. Acad. Sci. U.S.A. 100, 3778-3783.
    • (2003) Proc. Natl. Acad. Sci. U.S.A. , vol.100 , pp. 3778-3783
    • Shokhireva, T.1    Berry, R.E.2    Uno, E.3    Balfour, C.A.4    Zhang, H.5    Walker, F.A.6
  • 27
    • 0002306568 scopus 로고
    • A critical comparison of least absolute deviation fitting (robust) and least-squares fitting: The importance of error distributions
    • Matheson, I. B. C. (1990) A critical comparison of least absolute deviation fitting (robust) and least-squares fitting: the importance of error distributions, Comput. Chem. 14, 49-57.
    • (1990) Comput. Chem. , vol.14 , pp. 49-57
    • Matheson, I.B.C.1
  • 29
    • 0033213239 scopus 로고    scopus 로고
    • The finer things in X-ray diffraction data collection
    • Pflugrath, J. W. (1999) The finer things in X-ray diffraction data collection, Acta Crystallogr. D55, 1718-1725.
    • (1999) Acta Crystallogr. , vol.D55 , pp. 1718-1725
    • Pflugrath, J.W.1
  • 30
    • 84889120137 scopus 로고
    • Improved methods for building protein models in electron density maps and the location of errors in these models
    • Jones, T. A., Zou, J. Y., Cowan, S. W., and Kjelgard, M. (1991) Improved methods for building protein models in electron density maps and the location of errors in these models, Acta Crystallogr. A47, 110-119.
    • (1991) Acta Crystallogr. , vol.A47 , pp. 110-119
    • Jones, T.A.1    Zou, J.Y.2    Cowan, S.W.3    Kjelgard, M.4
  • 31
    • 0030880598 scopus 로고    scopus 로고
    • SHELXL: High-resolution refinement
    • Sheldrick, G. M., and Schneider, T. R. (1997) SHELXL: High-resolution refinement, Methods Enzymol. 277, 319-343.
    • (1997) Methods Enzymol. , vol.277 , pp. 319-343
    • Sheldrick, G.M.1    Schneider, T.R.2
  • 32
    • 0028103275 scopus 로고
    • The CCP4 Suite: Programs for protein crystallography
    • Collaborative Computational Project Number 4 (1994) The CCP4 Suite: Programs for protein crystallography, Acta Crystallogr. D50, 760-763.
    • (1994) Acta Crystallogr. , vol.D50 , pp. 760-763
  • 33
    • 0026244229 scopus 로고
    • MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
    • Kraulis, P. J. (1991) MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures, J. Appl. Crystallogr. 24, 946-950.
    • (1991) J. Appl. Crystallogr. , vol.24 , pp. 946-950
    • Kraulis, P.J.1
  • 34
    • 0030729838 scopus 로고    scopus 로고
    • An extensively modified version of MolScript that includes greatly enhanced coloring capabilities
    • Esnouf, R. M. (1997) An extensively modified version of MolScript that includes greatly enhanced coloring capabilities, J. Mol. Graphics Modell. 15, 132-134, 112-113.
    • (1997) J. Mol. Graphics Modell. , vol.15 , pp. 132-134
    • Esnouf, R.M.1
  • 35
    • 0028057108 scopus 로고
    • Raster3D Version 2.0: A program for photorealistic molecular graphics
    • Merritt, E. A., and Murphy, M. E. P. (1994) Raster3D Version 2.0: A program for photorealistic molecular graphics, Acta Crystallogr. D50, 869-873.
    • (1994) Acta Crystallogr. , vol.D50 , pp. 869-873
    • Merritt, E.A.1    Murphy, M.E.P.2
  • 37
    • 0015502050 scopus 로고
    • Mechanisms of the reactions of cytochrome c. Rate and equilibrium constants for ligand binding to horse heart ferricytochrome c
    • Sutin, N., and Yandell, J. K. (1972) Mechanisms of the reactions of cytochrome c. Rate and equilibrium constants for ligand binding to horse heart ferricytochrome c, J. Biol. Chem. 247, 6932-6936.
    • (1972) J. Biol. Chem. , vol.247 , pp. 6932-6936
    • Sutin, N.1    Yandell, J.K.2
  • 39
    • 0023274482 scopus 로고
    • Reaction of nitric oxide with heme proteins and model compounds of hemoglobin
    • Sharma, V. S., Traylor, T. G., Gardiner, R., and Mizukami, H. (1987) Reaction of nitric oxide with heme proteins and model compounds of hemoglobin, Biochemistry 26, 3837-3843,
    • (1987) Biochemistry , vol.26 , pp. 3837-3843
    • Sharma, V.S.1    Traylor, T.G.2    Gardiner, R.3    Mizukami, H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.