메뉴 건너뛰기




Volumn 51, Issue 3, 2004, Pages 312-320

Multiple polymorphic sites at the ITS and ATAN loci in cultured isolates of Perkinsus marinus

Author keywords

5.8S rRNA gene; Internal transcribed spacer 1; Internal transcribed spacer 2; Polymorphism

Indexed keywords

RIBOSOMAL SPACER DNA; SPACER DNA;

EID: 2542473414     PISSN: 10665234     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1550-7408.2004.tb00572.x     Document Type: Article
Times cited : (33)

References (43)
  • 2
    • 0031793146 scopus 로고    scopus 로고
    • Perkinsus qugwadi sp. nov. (incertae sedis), a pathogenic protozoan parasite of Japanese scallops, Pactinopecten yessoensis, cultured in British Columbia, Canada
    • Blackbourn, J., Bower, S. M. & Meyer, G. R. 1998. Perkinsus qugwadi sp. nov. (incertae sedis), a pathogenic protozoan parasite of Japanese scallops, Pactinopecten yessoensis, cultured in British Columbia, Canada. Can. J. Zool., 76:942-953.
    • (1998) Can. J. Zool. , vol.76 , pp. 942-953
    • Blackbourn, J.1    Bower, S.M.2    Meyer, G.R.3
  • 3
    • 0029768436 scopus 로고    scopus 로고
    • Epizootiology of Perkinsus marinus disease of oysters in Chesapeake Bay, with emphasis on data since 1985
    • Burreson, E. M. & Ragone Calvo, L. M. 1996. Epizootiology of Perkinsus marinus disease of oysters in Chesapeake Bay, with emphasis on data since 1985. J. Shellfish Res., 15:17-34.
    • (1996) J. Shellfish Res. , vol.15 , pp. 17-34
    • Burreson, E.M.1    Ragone Calvo, L.M.2
  • 4
    • 0029662829 scopus 로고    scopus 로고
    • Host parasite interactions among broadly distributed populations of the eastern oyster Crassostrea virginica and the protozoan Perkinsus marinus
    • Bushek, D. & Allen Jr., S. K. 1996a. Host parasite interactions among broadly distributed populations of the eastern oyster Crassostrea virginica and the protozoan Perkinsus marinus. Mar. Ecol. Prog. Ser., 139:127-141.
    • (1996) Mar. Ecol. Prog. Ser. , vol.139 , pp. 127-141
    • Bushek, D.1    Allen Jr., S.K.2
  • 6
    • 0034070219 scopus 로고    scopus 로고
    • Short communication: Use of micromanipulation and "feeder layers" to clone the oyster pathogen Perkinsus marinus
    • Bushek, D., Holley, R. A. & Reece, K. 2000. Short communication: use of micromanipulation and "feeder layers" to clone the oyster pathogen Perkinsus marinus. J. Eukaryot. Microbiol., 47:164-166.
    • (2000) J. Eukaryot. Microbiol. , vol.47 , pp. 164-166
    • Bushek, D.1    Holley, R.A.2    Reece, K.3
  • 7
    • 0030026576 scopus 로고    scopus 로고
    • Identification of genetic heterogenecity in the Cryptosporidium parvum ribosomal repeat
    • Carraway, M., Tzipori, S. & Widmer, G. 1996. Identification of genetic heterogenecity in the Cryptosporidium parvum ribosomal repeat. Appl. Environ. Microbiol., 62:712-716.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 712-716
    • Carraway, M.1    Tzipori, S.2    Widmer, G.3
  • 8
    • 0027272740 scopus 로고
    • DNA regeneration in the polymerase chain reaction
    • Colgan, D. J. 1993. DNA regeneration in the polymerase chain reaction. J. Theoret. Biol., 162:289-307.
    • (1993) J. Theoret. Biol. , vol.162 , pp. 289-307
    • Colgan, D.J.1
  • 9
    • 0032995527 scopus 로고    scopus 로고
    • Theileria parva ribosomal internal transcribed spacer sequences exhibit extensive polymorphism and mosaic evolution: Application to the characterization of parasites from cattle and buffalo
    • Collins, N. E. & Allsopp, B. A. 1999. Theileria parva ribosomal internal transcribed spacer sequences exhibit extensive polymorphism and mosaic evolution: application to the characterization of parasites from cattle and buffalo. Parasitology, 118:541-551.
    • (1999) Parasitology , vol.118 , pp. 541-551
    • Collins, N.E.1    Allsopp, B.A.2
  • 10
    • 0033486166 scopus 로고    scopus 로고
    • Intra-specific and interspecific variation in the second internal transcribed spacer (ITS-2) sequence for Metastrongylus (Nematoda: Metastrongyloidea) detected by high resolution PCR-RFLP
    • Conole, J. C., Chilton, N. B., Jarvis, T. & Gasser, R. B. 1999. Intra-specific and interspecific variation in the second internal transcribed spacer (ITS-2) sequence for Metastrongylus (Nematoda:Metastrongyloidea) detected by high resolution PCR-RFLP. Int. J. Parasitol., 29:1935-1940.
    • (1999) Int. J. Parasitol. , vol.29 , pp. 1935-1940
    • Conole, J.C.1    Chilton, N.B.2    Jarvis, T.3    Gasser, R.B.4
  • 11
    • 0035120202 scopus 로고    scopus 로고
    • Description of Perkinsus andrewsi n. sp. isolated from the Baltic clam (Macoma balthica) by characterization of the ribosomal RNA locus, and development of a species-specific PCR-based diagnostic assay
    • Coss, C. A., Robledo, J. A., Ruiz, G. M. & Vasta, G. R. 2001. Description of Perkinsus andrewsi n. sp. isolated from the Baltic clam (Macoma balthica) by characterization of the ribosomal RNA locus, and development of a species-specific PCR-based diagnostic assay. J. Eukaryot. Microbiol., 48:52-61.
    • (2001) J. Eukaryot. Microbiol. , vol.48 , pp. 52-61
    • Coss, C.A.1    Robledo, J.A.2    Ruiz, G.M.3    Vasta, G.R.4
  • 12
    • 2542463721 scopus 로고    scopus 로고
    • Identification of a new species isolated from Macoma balthica by characterization of the ribosomal RNA locus. Evidence of its presence, simultaneously with P. marinus, in Crassostrea virginica, Macoma mitchelli and Mercenaria mercenaria
    • Coss, C. A., Robledo, J. A., Vasta, G. R. & Ruiz, G. M. 1999. Identification of a new species isolated from Macoma balthica by characterization of the ribosomal RNA locus. Evidence of its presence, simultaneously with P. marinus, in Crassostrea virginica, Macoma mitchelli and Mercenaria mercenaria. J. Shellfish Res., 18:294.
    • (1999) J. Shellfish Res. , vol.18 , pp. 294
    • Coss, C.A.1    Robledo, J.A.2    Vasta, G.R.3    Ruiz, G.M.4
  • 13
    • 0036935345 scopus 로고    scopus 로고
    • PCR-mediated recombination in amplification products derived from polyploid cotton
    • Cronn, R., Cedroni, M., Haselkorn, T., Grover, C., Wendel, J. F. 2002. PCR-mediated recombination in amplification products derived from polyploid cotton. Theoret. App. Gen., 104:482-489.
    • (2002) Theoret. App. Gen. , vol.104 , pp. 482-489
    • Cronn, R.1    Cedroni, M.2    Haselkorn, T.3    Grover, C.4    Wendel, J.F.5
  • 14
    • 0030961936 scopus 로고    scopus 로고
    • Species variation within the internal transcribed spacer (ITS) region of Gyrodactylus (Monogenea: Gyrodactylidae) ribosomal RNA genes
    • Cunningham, C. O. 1997. Species variation within the internal transcribed spacer (ITS) region of Gyrodactylus (Monogenea: Gyrodactylidae) ribosomal RNA genes. J. Parasitol., 83:215-219.
    • (1997) J. Parasitol. , vol.83 , pp. 215-219
    • Cunningham, C.O.1
  • 15
    • 0034127780 scopus 로고    scopus 로고
    • Molecular characterization of the ribosomal RNA gene region of Perkinsus atlanticus: Its use in phylogenetic analysis and as a target for a molecular diagnosis
    • De La Herrán, R., Garrido-Ramos, M. A., Navas, J. I., Rejón, C. R. & Rejón, M. R. 2000. Molecular characterization of the ribosomal RNA gene region of Perkinsus atlanticus: its use in phylogenetic analysis and as a target for a molecular diagnosis. Parasitology, 120:345-353.
    • (2000) Parasitology , vol.120 , pp. 345-353
    • De La Herrán, R.1    Garrido-Ramos, M.A.2    Navas, J.I.3    Rejón, C.R.4    Rejón, M.R.5
  • 16
    • 0028860075 scopus 로고
    • Use of a tetrazolium-based cell proliferation assay to measure effects of in vitro conditions on Perkinsus marinus (Apicomplexa) proliferation
    • Dungan, C. F. & Hamilton, R. M. 1995. Use of a tetrazolium-based cell proliferation assay to measure effects of in vitro conditions on Perkinsus marinus (Apicomplexa) proliferation. J. Eukaryot. Microbiol., 42:379-388.
    • (1995) J. Eukaryot. Microbiol. , vol.42 , pp. 379-388
    • Dungan, C.F.1    Hamilton, R.M.2
  • 17
    • 0037150454 scopus 로고    scopus 로고
    • Two epizootic diseases in Chesapeake Bay commercial clams Mya arenaria and Tagelus plebeius
    • Dungan, C. F., Hamilton, R. M., Hudson, K. L. & Reece, K. S. 2002. Two epizootic diseases in Chesapeake Bay commercial clams Mya arenaria and Tagelus plebeius. Dis. Aquat. Org., 50:67-78.
    • (2002) Dis. Aquat. Org. , vol.50 , pp. 67-78
    • Dungan, C.F.1    Hamilton, R.M.2    Hudson, K.L.3    Reece, K.S.4
  • 18
    • 0032832187 scopus 로고    scopus 로고
    • Isolation and characterization of Perkinsus marinus proteases using bacitracin-sepharose affinity chromatography
    • Faisal, M., Schafhauser, D. Y., Garreis, K. A., Elsayed, E. & La Peyre, J. F. 1999. Isolation and characterization of Perkinsus marinus proteases using bacitracin-sepharose affinity chromatography. Comp. Biochem. Physiol., (Part B) 123:417-426.
    • (1999) Comp. Biochem. Physiol., (Part B) , vol.123 , pp. 417-426
    • Faisal, M.1    Schafhauser, D.Y.2    Garreis, K.A.3    Elsayed, E.4    La Peyre, J.F.5
  • 19
    • 0030862643 scopus 로고    scopus 로고
    • Comparative sequence analysis of 5.8S rRNA genes and internal transcribed spacer (ITS) regions of trichomonadid protozoa
    • Felleisen, R. S. J. 1997. Comparative sequence analysis of 5.8S rRNA genes and internal transcribed spacer (ITS) regions of trichomonadid protozoa. Parasitology, 115:111-119.
    • (1997) Parasitology , vol.115 , pp. 111-119
    • Felleisen, R.S.J.1
  • 20
    • 0029752964 scopus 로고    scopus 로고
    • Range extension by the oyster parasite Perkinsus marinus into the northeastern United States: Response to climate change?
    • Ford, S. E. 1996. Range extension by the oyster parasite Perkinsus marinus into the northeastern United States: response to climate change? J. Shellfish Res., 15:45-56.
    • (1996) J. Shellfish Res. , vol.15 , pp. 45-56
    • Ford, S.E.1
  • 21
    • 0028122214 scopus 로고
    • Variation in the two internal transcribed spacers and 5.8S ribosomal RNA from five isolates of the marine parasite Perkinsus (Protista, Apicomplexa)
    • Goggin, C. L. 1994. Variation in the two internal transcribed spacers and 5.8S ribosomal RNA from five isolates of the marine parasite Perkinsus (Protista, Apicomplexa). Mol. Biochem. Parasitol., 65:179-182.
    • (1994) Mol. Biochem. Parasitol. , vol.65 , pp. 179-182
    • Goggin, C.L.1
  • 22
    • 0003053183 scopus 로고
    • Cross-infection experiments with Australian Perkinsus species
    • Goggin, C. L., Sewell, K. B. & Lester, R. J. G. 1989. Cross-infection experiments with Australian Perkinsus species. Dis. Aquat. Org., 7:55-59.
    • (1989) Dis. Aquat. Org. , vol.7 , pp. 55-59
    • Goggin, C.L.1    Sewell, K.B.2    Lester, R.J.G.3
  • 23
    • 11544306243 scopus 로고    scopus 로고
    • Perkinsus protozoan infection in short-necked clam Tapes (= Ruditapes) philippinarum in Japan
    • Hamaguchi, M., Suzuki, N., Usuki, H. & Ishioka, H. 1998. Perkinsus protozoan infection in short-necked clam Tapes (= Ruditapes) philippinarum in Japan. Fish Pathol., 33:473-480.
    • (1998) Fish Pathol. , vol.33 , pp. 473-480
    • Hamaguchi, M.1    Suzuki, N.2    Usuki, H.3    Ishioka, H.4
  • 24
    • 0026300584 scopus 로고
    • Ribosomal DNA: Molecular evolution and phylogenetic inference
    • Hillis, D. M. & Dixon, M. T. 1991. Ribosomal DNA: molecular evolution and phylogenetic inference. Quart. Rev. Biol., 66:411-432.
    • (1991) Quart. Rev. Biol. , vol.66 , pp. 411-432
    • Hillis, D.M.1    Dixon, M.T.2
  • 25
    • 0030068022 scopus 로고    scopus 로고
    • Rapid and sensitive identification of Neospora caninum by in vitro amplification of the internal transcribed spacer 1
    • Holmdahl, O. J. M. & Mattsson, J. G. 1996. Rapid and sensitive identification of Neospora caninum by in vitro amplification of the internal transcribed spacer 1. Parasitology, 112:177-182.
    • (1996) Parasitology , vol.112 , pp. 177-182
    • Holmdahl, O.J.M.1    Mattsson, J.G.2
  • 26
    • 0028994893 scopus 로고
    • Sub-clinical infection of oysters (Crassostrea virginica) (Gmelin 1791) from Maine by species of the genus Perkinsus (Apicomplexa)
    • Kleinschuster, S. J. & Parent, J. 1995. Sub-clinical infection of oysters (Crassostrea virginica) (Gmelin 1791) from Maine by species of the genus Perkinsus (Apicomplexa). J. Shellfish Res., 14:489-491.
    • (1995) J. Shellfish Res. , vol.14 , pp. 489-491
    • Kleinschuster, S.J.1    Parent, J.2
  • 27
    • 0033166562 scopus 로고    scopus 로고
    • Characterization of two Perkinsus spp. from the softshell clam, Mya arenaria, using the small subunit ribosomal RNA gene
    • Kotob, S. I., McLaughlin, S. M., vanBerkum, P. & Faisal, M. 1999a. Characterization of two Perkinsus spp. from the softshell clam, Mya arenaria, using the small subunit ribosomal RNA gene. J. Eukaryot. Microbiol., 46:441-446.
    • (1999) J. Eukaryot. Microbiol. , vol.46 , pp. 441-446
    • Kotob, S.I.1    McLaughlin, S.M.2    VanBerkum, P.3    Faisal, M.4
  • 28
    • 0032885229 scopus 로고    scopus 로고
    • Discrimination between two Perkinsus spp. isolated from the softshell clam, Mya arenaria, by sequence analysis of two internal transcribed spacer regions and the 5.8S ribosomal RNA gene
    • Kotob, S. I., McLaughlin, S. M., vanBerkum, P. & Faisal, M. 1999b. Discrimination between two Perkinsus spp. isolated from the softshell clam, Mya arenaria, by sequence analysis of two internal transcribed spacer regions and the 5.8S ribosomal RNA gene. Parasitology, 119:363-368.
    • (1999) Parasitology , vol.119 , pp. 363-368
    • Kotob, S.I.1    McLaughlin, S.M.2    VanBerkum, P.3    Faisal, M.4
  • 29
    • 0000284599 scopus 로고    scopus 로고
    • In vitro propagation of two species from the softshell clam (Mya arenaria)
    • McLaughlin, S. M. & Faisal, M. 1998. In vitro propagation of two species from the softshell clam (Mya arenaria). Parasite, 5:341-348.
    • (1998) Parasite , vol.5 , pp. 341-348
    • McLaughlin, S.M.1    Faisal, M.2
  • 30
    • 0012867837 scopus 로고    scopus 로고
    • Synonymy of Perkinsus olseni Lester and Davis, 1981 and Perkinsus atlanticus Azevedo, 1989 and an update on the phylogenetics position of the genus Perkinsus
    • Murrell, A., Kleeman, S. N., Barker, S. C. & Lester, R. J. G. 2002. Synonymy of Perkinsus olseni Lester and Davis, 1981 and Perkinsus atlanticus Azevedo, 1989 and an update on the phylogenetics position of the genus Perkinsus. Bull. Eur. Assoc. Fish Pathol., 22:258-265.
    • (2002) Bull. Eur. Assoc. Fish Pathol. , vol.22 , pp. 258-265
    • Murrell, A.1    Kleeman, S.N.2    Barker, S.C.3    Lester, R.J.G.4
  • 31
    • 0021243150 scopus 로고
    • The ribosomal 5.8S RNA: Eukaryotic adaptation or processing variant?
    • Nazar, R. N. 1984. The ribosomal 5.8S RNA: eukaryotic adaptation or processing variant? Can. J. Biochem. Cell Biol., 62:311-320.
    • (1984) Can. J. Biochem. Cell Biol. , vol.62 , pp. 311-320
    • Nazar, R.N.1
  • 32
    • 0024970684 scopus 로고
    • Ancient DNA and the polymerase chain reaction
    • Pääbo, S., Higuchi, R. G. & Wilson, A. C. 1989. Ancient DNA and the polymerase chain reaction. J. Biol. Chem., 264:9709-9712.
    • (1989) J. Biol. Chem. , vol.264 , pp. 9709-9712
    • Pääbo, S.1    Higuchi, R.G.2    Wilson, A.C.3
  • 33
    • 0029936115 scopus 로고    scopus 로고
    • Detection of Neospora caninum DNA by the polymerase chain reaction
    • Payne, S. & Ellis, J. 1996. Detection of Neospora caninum DNA by the polymerase chain reaction. Int. J. Parasitol., 26:347-351.
    • (1996) Int. J. Parasitol. , vol.26 , pp. 347-351
    • Payne, S.1    Ellis, J.2
  • 34
    • 0030772616 scopus 로고    scopus 로고
    • Molecular markers for population genetic analysis of Perkinsus marinus
    • Reece, K. S., Bushek, D. & Graves, J. E. 1997. Molecular markers for population genetic analysis of Perkinsus marinus. Mol. Mar. Biol. Biotechnol., 6:197-206.
    • (1997) Mol. Mar. Biol. Biotechnol. , vol.6 , pp. 197-206
    • Reece, K.S.1    Bushek, D.2    Graves, J.E.3
  • 35
    • 0035682137 scopus 로고    scopus 로고
    • Geographic distribution of Perkinsus marinus genetic strains along the Atlantic and Gulf Coasts of the USA
    • Reece, K. S., Bushek, D., Hudson, K. & Graves, J. E. 2001. Geographic distribution of Perkinsus marinus genetic strains along the Atlantic and Gulf Coasts of the USA. Mar. Biol., 139:1047-1055.
    • (2001) Mar. Biol. , vol.139 , pp. 1047-1055
    • Reece, K.S.1    Bushek, D.2    Hudson, K.3    Graves, J.E.4
  • 36
    • 0033784529 scopus 로고    scopus 로고
    • Characterization of the ribosomal RNA locus of Perkinsus atlanticus and development of a polymerase chain reaction-based diagnostic assay
    • Robledo, J. A. F., Coss, C. A. & Vasta, G. R. 2000. Characterization of the ribosomal RNA locus of Perkinsus atlanticus and development of a polymerase chain reaction-based diagnostic assay. J. Parasitol., 86:972-978.
    • (2000) J. Parasitol. , vol.86 , pp. 972-978
    • Robledo, J.A.F.1    Coss, C.A.2    Vasta, G.R.3
  • 37
    • 0032412415 scopus 로고    scopus 로고
    • Species-specificity and sensitivity of a PCR-based assay for Perkinsus marinus in the eastern oyster, Crassostrea virginica: A comparison with the fluid thioglycollate assay
    • Robledo, J. A. F., Gauthier, J. D., Coss, C. A., Wright, A. C. & Vasta, G. R. 1998. Species-specificity and sensitivity of a PCR-based assay for Perkinsus marinus in the eastern oyster, Crassostrea virginica: a comparison with the fluid thioglycollate assay. J. Parasitol., 84:1237-1244.
    • (1998) J. Parasitol. , vol.84 , pp. 1237-1244
    • Robledo, J.A.F.1    Gauthier, J.D.2    Coss, C.A.3    Wright, A.C.4    Vasta, G.R.5
  • 38
    • 0032870693 scopus 로고    scopus 로고
    • Nucleotide sequence variability in the nontranscribed spacer of the rRNA locus in the oyster parasite Perkinsus marinus
    • Robledo, J. A. F., Wright, A. C., Marsh, A. G. & Vasta, G. R. 1999. Nucleotide sequence variability in the nontranscribed spacer of the rRNA locus in the oyster parasite Perkinsus marinus. J. Parasitol., 85:650-656.
    • (1999) J. Parasitol. , vol.85 , pp. 650-656
    • Robledo, J.A.F.1    Wright, A.C.2    Marsh, A.G.3    Vasta, G.R.4
  • 40
    • 0034193802 scopus 로고    scopus 로고
    • Inter-and intra-strain variation in the 5.8S ribosomal RNA and internal transcribed spacer sequences of Entamoeba histolytica and comparison with Entamoeba dispar, Entamoeba moshkovskii and Entamoeba invadens
    • Som, I., Azam, A., Bhattacharya, A. & Bhattacharya, S. 2000. Inter-and intra-strain variation in the 5.8S ribosomal RNA and internal transcribed spacer sequences of Entamoeba histolytica and comparison with Entamoeba dispar, Entamoeba moshkovskii and Entamoeba invadens. Int. J. Parasitol., 30:723-728.
    • (2000) Int. J. Parasitol. , vol.30 , pp. 723-728
    • Som, I.1    Azam, A.2    Bhattacharya, A.3    Bhattacharya, S.4
  • 42
    • 0027968068 scopus 로고
    • Improving the sensitivity of progressive multiple sequence management, analysis, and homology determination
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. 1994. Improving the sensitivity of progressive multiple sequence management, analysis, and homology determination. Nucleic Acids Res., 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 43
    • 0024282746 scopus 로고
    • Fidelity of DNA synthesis by the Thermus aquaticus DNA polymerase
    • Tindall, K. R. & Kunkel, T. A. 1988. Fidelity of DNA synthesis by the Thermus aquaticus DNA polymerase. Biochemistry, 27:6008-6013.
    • (1988) Biochemistry , vol.27 , pp. 6008-6013
    • Tindall, K.R.1    Kunkel, T.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.