A basic helix-loop-helix transcription factor essential for cytochrome P450 induction in response to alkanes in yeast Yarrowia lipolytica

Journal of Biological Chemistry

Volumn 279, Issue 21, 2004, Pages 22183-22189

  Yamagami, Setsu ^a   Morioka, Daisuke ^a   Fukuda, Ryouichi ^a   Ohta, Akinori ^a  

^a UNIVERSITY OF TOKYO   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

GENES; METABOLISM; YEAST;

ALKANE-INDUCIBLE GENES; HELIX-LOOP-HELIX TRANSCRIPTION;

BIOCHEMISTRY;

ALKANE; ALKANE RESPONSIVE ELEMENT 1; CIS ACTING ELEMENT; CYTOCHROME P450; HELIX LOOP HELIX PROTEIN; PROTEIN YAS1P; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

ADAPTATION; AMINO ACID SEQUENCE; ARTICLE; AUTOREGULATION; CELL METABOLISM; CELL NUCLEUS; ENZYME INDUCTION; FUNGUS MUTANT; GENE EXPRESSION; GENE INDUCTION; GENE LOSS; GENETIC SELECTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN LOCALIZATION; SIGNAL TRANSDUCTION; TRANSCRIPTION INITIATION; YARROWIA LIPOLYTICA; YAS1 GENE;

ALKANES; AMINO ACID MOTIFS; AMINO ACID SEQUENCE; BASE SEQUENCE; BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTORS; BETA-GALACTOSIDASE; BINDING SITES; BLOTTING, NORTHERN; CELL DIVISION; CELL NUCLEUS; CLONING, MOLECULAR; CYTOCHROME P-450 ENZYME SYSTEM; DNA RESTRICTION ENZYMES; DNA-BINDING PROTEINS; FLUORESCENT ANTIBODY TECHNIQUE, INDIRECT; IMMUNOBLOTTING; MODELS, BIOLOGICAL; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; MUTATION; PLASMIDS; PROMOTER REGIONS (GENETICS); PROTEIN BINDING; RESPONSE ELEMENTS; SIGNAL TRANSDUCTION; TIME FACTORS; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC; YARROWIA;

FUNGI; YARROWIA LIPOLYTICA;

EID: 2542431032     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M313313200     Document Type: Article

References (38)

1. Nelson, D. R., Koymans, L., Kamataki, T., Stegeman, J. J., Feyereisen, R., Waxman, D. J., Waterman, M. R., Gotoh, O., Coon, M. J., Estabrook, R. W., Gunsalus, I. C., and Nebert, D. W. (1996) Pharmacogenetics 6, 1-42
2. Klug, M. J., and Markovetz, A. J. (1971) Adv. Microb. Physiol. 5, 1-43
3. Spormann, A. M., and Widdel, F. (2000) Biodegradation 11, 85-105
4. Cardini, G., and Jurtshuk, P. (1970) J. Biol. Chem. 245, 2789-2796
5. Lebeault, J. M., Lode, E. T., and Coon, M. J. (1971) Biochem. Biophys. Res. Commun. 42, 413-419
6. Asperger, O., Naumann, A., and Kleber, H. P. (1981) FEMS Microbiol. Lett. 11, 309-312
7. Sanglard, D., Chen, C., and Loper, J. C. (1987) Biochem. Biophys. Res. Commun. 144, 251-257
8. Sanglard, D., and Fiechter, A. (1989) FEBS Lett. 256, 128-134
9. Seghezzi, W., Sanglard, D., and Fiechter, A. (1991) Gene 106, 51-60
10. Seghezzi, W., Meili, C., Ruffiner, R., Kuenzi, R., Sanglard, D., and Fiechter, A. (1992) DNA Cell Biol. 11, 767-780
11. Ohkuma, M., Tanimoto, T., Yano, K., and Takagi, M. (1991) DNA Cell Biol. 10, 271-282
12. Ohkuma, M., Muraoka, S., Tanimoto, T., Fujii, M., Ohta, A., and Takagi, M. (1995) DNA Cell Biol. 14, 163-173
13. Iida, T., Ohta, A., and Takagi, M. (1998) Yeast 14, 1387-1397
14. Iida, T., Sumita, T., Ohta, A., and Takagi, M. (2000) Yeast 16, 1077-1087
15. Wickerham, L. J., Kurtzman, C. P., and Herman, A. I. (1970) Science 167, 1141
16. Barth, G., and Gaillardin, C. (1997) FEMS Microbiol. Rev. 19, 219-237
17. Wang, H. J., Le Dall, M. T., Wach, Y., Laroche, C., Belin, J. M., Gaillardin, C., and Nicaud, J. M. (1999) J. Bacteriol. 181, 5140-5148
18. Berninger, G., Schmidtchen, R., Casel, G., Knorr, A., Rautenstrauss, K., Kunau, W. H., and Schweizer, E. (1993) Eur. J. Biochem. 216, 607-613
19. Yamagami, S., Iida, T., Nagata, Y., Ohta, A., and Takagi, M. (2001) Biochem. Biophys. Res. Commun. 282, 832-838
20. Madzak, C., Blanchin-Roland, S., Cordero Otero, R. R., and Gaillardin, C. (1999) Microbiology 145, 75-87
21. Sumita, T., Iida, T., Yamagami, S., Horiuchi, H., Takagi, M., and Ohta, A. (2002) Biochem. Biophys. Res. Commun. 294, 1071-1078
22. Barth, G., and Gaillardin, C. (1996) in Non-conventional Yeasts in Biotechnology: A Handbook (Wolf, K., ed) pp. 313-388, Springer-Verlag, Berlin
23. Takahashi, K., Saitoh, S., and Yanagida, M. (2000) Science's STKE http://stke.sciencemag.org/cgi/content/full/sigtrans;2000/56/pl1
24. Bon, E., Casaregola, S., Blandin, G., Llorente, B., Neuveglise, C., Munsterkotter, M., Guldener, U., Mewes, H. W., Van Helden, J., Dujon, B., and Gaillardin, C. (2003) Nucleic Acids Res. 31, 1121-1135
25. Falquet, L., Pagni, M., Bucher, P., Hulo, N., Sigrist, C. J., Hofmann, K., and Bairoch, A. (2002) Nucleic Acids Res. 30, 235-238
26. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D. J. (1997) Nucleic Acids Res. 25, 3389-3402
27. Robinson, K. A., and Lopes, J. M. (2000) Nucleic Acids Res. 28, 1499-1505
28. Atchley, W. R., and Fitch, W. M. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 5172-5176
29. Takano, E., Maki, M., Mori, H., Hatanaka, M., Marti, T., Titani, K., Kannagi, R., Ooi, T., and Murachi, T. (1988) Biochemistry 27, 1964-1972
30. Murre, C., Bain, G., van Dijk, M. A., Engel, I., Furnari, B. A., Massari, M. E., Matthews, J. R., Quong, M. W., Rivera, R. R., and Stuiver, M. H. (1994) Biochim. Biophys. Acta 1218, 129-135
31. Kanai, T., Hara, A., Kanayama, N., Ueda, M., and Tanaka, A. (2000) J. Bacteriol. 182, 2492-2497
32. Ohkuma, M., Masuda, Y., Park, S. M., Ohtomo, R., Ohta, A., and Takagi, M. (1995) Biosci. Biotechnol. Biochem. 59, 1328-1330
33. Denison, M. S., and Whitlock, J. P., Jr. (1995) J. Biol. Chem. 270, 18175-18178
34. Waxman, D. J. (1999) Arch Biochem. Biophys. 369, 11-23
35. Khan, R., Tan, R., Mariscal, A. G., and Straney, D. (2003) Mol. Microbiol. 49, 117-130
36. Eseriva, H., Safi, R., Hanni, C., Langlois, M. C., Saumitou-Laprade, P., Stehelin, D., Capron, A., Pierce, R., and Laudet, V. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 6803-6808
37. Mimura, J., and Fujii-Kuriyama, Y. (2003) Biochim. Biophys. Acta 1619, 263-268
38. Thompson, J. D., Higgins, D. G., and Gibson, T. J. (1994) Nucleic Acids Res. 22, 4673-4680