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Volumn 43, Issue 9, 2005, Pages 4466-4472

Method for rapid identification and differentiation of the species of the Mycobactenum chelonae complex based on 16S-23S rRNA gene internal transcribed spacer PCR-restriction analysis

Author keywords

[No Author keywords available]

Indexed keywords

INTERNAL TRANSCRIBED SPACER; PRIMER DNA; RESTRICTION ENDONUCLEASE; RESTRICTION ENZYME HPHI; RESTRICTION ENZYME MAEII; RNA 16S; RNA 23S; UNCLASSIFIED DRUG;

EID: 24744449529     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.43.9.4466-4472.2005     Document Type: Article
Times cited : (32)

References (26)
  • 1
    • 0034879415 scopus 로고    scopus 로고
    • Identification of 54 mycobacterial species by PCR-restriction fragment length polymorphism analysis of the hsp65 gene
    • Brunello, F., M. Ligozzi, E. Cristelli, S. Bonora, E. Tortoli, and R. Fontana. 2001. Identification of 54 mycobacterial species by PCR-restriction fragment length polymorphism analysis of the hsp65 gene. J. Clin. Microbiol. 39:2799-2806.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 2799-2806
    • Brunello, F.1    Ligozzi, M.2    Cristelli, E.3    Bonora, S.4    Tortoli, E.5    Fontana, R.6
  • 2
    • 0025171366 scopus 로고
    • High-performance liquid chromatography patterns of mycolic acids as criteria for identification of Mycobacterium chehnae, Mycobacterium fortuitum. and M. smegmatis
    • Butler, W. R., and J. O. Kilburn. 1990. High-performance liquid chromatography patterns of mycolic acids as criteria for identification of Mycobacterium chehnae, Mycobacterium fortuitum. and M. smegmatis. J. Clin. Microbiol. 28:2094-2098.
    • (1990) J. Clin. Microbiol. , vol.28 , pp. 2094-2098
    • Butler, W.R.1    Kilburn, J.O.2
  • 3
    • 0031863291 scopus 로고    scopus 로고
    • Comparison of the ABI 7700 system (TaqMan) and competitive PCR for quantification of IS6110 DNA in sputum during treatment of tuberculosis
    • Desjardin, L. E., Y. Chen, M. D. Perkins, L. Teixeira, M. D. Cave, and K. D. Eisenach. 1998. Comparison of the ABI 7700 system (TaqMan) and competitive PCR for quantification of IS6110 DNA in sputum during treatment of tuberculosis. J. Clin. Microbiol. 36:1964-1968.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 1964-1968
    • Desjardin, L.E.1    Chen, Y.2    Perkins, M.D.3    Teixeira, L.4    Cave, M.D.5    Eisenach, K.D.6
  • 4
    • 0028849846 scopus 로고
    • Ribosomal internal transcribed spacer sequences are identical among Mycobacterium avium-intracellulare complex isolates from AIDS patients, but vary among isolates from elderly pulmonary disease patients
    • De Smet, K. A., I. N. Brown, M. Yates, and J. Ivanyi. 1995. Ribosomal internal transcribed spacer sequences are identical among Mycobacterium avium-intracellulare complex isolates from AIDS patients, but vary among isolates from elderly pulmonary disease patients. Microbiology 141:2739-2747.
    • (1995) Microbiology , vol.141 , pp. 2739-2747
    • De Smet, K.A.1    Brown, I.N.2    Yates, M.3    Ivanyi, J.4
  • 5
    • 0030783078 scopus 로고    scopus 로고
    • Rapid identification of mycobacteria to species level by PCR-restriction fragment length polymorphism analysis of the fap65 gene and proposition of an algorithm to differentiate 34 mycobacterial species
    • Devallois, A., K. S. Goh, and N. Rastogi. 1997. Rapid identification of mycobacteria to species level by PCR-restriction fragment length polymorphism analysis of the fap65 gene and proposition of an algorithm to differentiate 34 mycobacterial species. J. Clin. Microbiol. 35:2969-2973.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 2969-2973
    • Devallois, A.1    Goh, K.S.2    Rastogi, N.3
  • 6
    • 0036737998 scopus 로고    scopus 로고
    • Nontuberculous mycobacteria in the environment
    • Falkinham, J. O., III. 2002. Nontuberculous mycobacteria in the environment. Clin. Chest Med. 23:529-551.
    • (2002) Clin. Chest Med. , vol.23 , pp. 529-551
    • Falkinham III, J.O.1
  • 7
    • 0026562481 scopus 로고
    • Contamination of flexible fiberoptic bronchoscopes with Mycobacterium chelonae linked to an automated bronchoscope disinfection machine
    • Fraser, V. J., M. Jones, P. R. Murray, G. Medoff, Y. Zhang, and R. J. Wallace, Jr. 1992. Contamination of flexible fiberoptic bronchoscopes with Mycobacterium chelonae linked to an automated bronchoscope disinfection machine. Am. Rev. Respir. Dis. 145:853-855.
    • (1992) Am. Rev. Respir. Dis. , vol.145 , pp. 853-855
    • Fraser, V.J.1    Jones, M.2    Murray, P.R.3    Medoff, G.4    Zhang, Y.5    Wallace Jr., R.J.6
  • 9
    • 0027241144 scopus 로고
    • Sequence-based differentiation of strains in the Mycobacterium avium complex
    • Frothingham, R., and K. H. Wilson. 1993. Sequence-based differentiation of strains in the Mycobacterium avium complex. J. Bacteriol. 175:2818-2825.
    • (1993) J. Bacteriol. , vol.175 , pp. 2818-2825
    • Frothingham, R.1    Wilson, K.H.2
  • 10
    • 0029957951 scopus 로고    scopus 로고
    • Comparison of the small 16S to 23S intergenic spacer region of the rRNA operons of some Escherichia coli strains of the ECOR collection and Escherichia coli K-12
    • Garcia-Martinez, J., A. Martinez-Murcia, A. I. Anton, and F. Rodriguez-Valera. 1996. Comparison of the small 16S to 23S intergenic spacer region of the rRNA operons of some Escherichia coli strains of the ECOR collection and Escherichia coli K-12. J. Bacteriol. 178:6374-6377.
    • (1996) J. Bacteriol. , vol.178 , pp. 6374-6377
    • Garcia-Martinez, J.1    Martinez-Murcia, A.2    Anton, A.I.3    Rodriguez-Valera, F.4
  • 11
    • 0036159415 scopus 로고    scopus 로고
    • Differentiation between Mycobacterium farcinogenes and Mycobacterium senegalense strains based on 16S-23S ribosomal DNA internal transcribed spacer sequences
    • Hamid, M. E., A. Roth, O. Landt, R. M. Kroppenstedt, M. Goodfellow, and H. Mauch. 2002. Differentiation between Mycobacterium farcinogenes and Mycobacterium senegalense strains based on 16S-23S ribosomal DNA internal transcribed spacer sequences. J. Clin. Microbiol. 40:707-711.
    • (2002) J. Clin. Microbiol. , vol.40 , pp. 707-711
    • Hamid, M.E.1    Roth, A.2    Landt, O.3    Kroppenstedt, R.M.4    Goodfellow, M.5    Mauch, H.6
  • 12
    • 0345831993 scopus 로고    scopus 로고
    • Development of a single-tube cell lysis-based genus-specific PCR method for rapid identification of mycobacteria: Optimization of cell lysis, PCR primers and conditions, and restriction pattern analysis
    • Khan, I. U. H., and J. S. Yadav. 2004. Development of a single-tube cell lysis-based genus-specific PCR method for rapid identification of mycobacteria: optimization of cell lysis, PCR primers and conditions, and restriction pattern analysis. J. Clin. Microbiol. 42:453-457.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 453-457
    • Khan, I.U.H.1    Yadav, J.S.2
  • 13
    • 0026802249 scopus 로고
    • Genetic heterogeneity within Mycobacterium fortuitum complex species: Genotypic criteria for identification
    • Kirschner, P., M. Kiekenbeck, D. Meissner, J. Wolters, and E. C. Böttger. 1992. Genetic heterogeneity within Mycobacterium fortuitum complex species: genotypic criteria for identification. J. Clin. Microbiol. 30:2772-2775.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 2772-2775
    • Kirschner, P.1    Kiekenbeck, M.2    Meissner, D.3    Wolters, J.4    Böttger, E.C.5
  • 14
    • 0026533758 scopus 로고
    • Proposal of Mycobacterium peregrinum sp. nov., nom. rev., and elevation of Mycobacterium chelonae subsp. abscessus (Kubica et al.) to species status: Mycobacterium abscessus comb. nov
    • Kusunoki, S., and T. Ezaki. 1992. Proposal of Mycobacterium peregrinum sp. nov., nom. rev., and elevation of Mycobacterium chelonae subsp. abscessus (Kubica et al.) to species status: Mycobacterium abscessus comb. nov. Int. J. Syst. Bacteriol. 42:240-245.
    • (1992) Int. J. Syst. Bacteriol. , vol.42 , pp. 240-245
    • Kusunoki, S.1    Ezaki, T.2
  • 15
    • 0000396158 scopus 로고
    • Hypersensitivity pneumonitis and exposure to acid-fast bacilli in coolant aerosols
    • Muilenberg, M. L., H. A. Berge, and T. Sweet. 1993. Hypersensitivity pneumonitis and exposure to acid-fast bacilli in coolant aerosols. J. Allergy Clin. Immunol. 91:311.
    • (1993) J. Allergy Clin. Immunol. , vol.91 , pp. 311
    • Muilenberg, M.L.1    Berge, H.A.2    Sweet, T.3
  • 16
    • 0034461021 scopus 로고    scopus 로고
    • Detection and identification of mycobacteria by amplification of the internal transcribed spacer regions with genus- and species-specific PCR primers
    • Park, H., H. Jang, C. Kim, B. Chung, C. L. Chang, S. K. Park, and S. Song. 2000. Detection and identification of mycobacteria by amplification of the internal transcribed spacer regions with genus- and species-specific PCR primers. J. Clin. Microbiol. 38:4080-4085.
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 4080-4085
    • Park, H.1    Jang, H.2    Kim, C.3    Chung, B.4    Chang, C.L.5    Park, S.K.6    Song, S.7
  • 17
    • 0031974203 scopus 로고    scopus 로고
    • Differentiation of phylogenetically related slowly growing mycobacte-ria based on 16S-23S rRNA gene internal transcribed spacer sequences
    • Roth, A., M. Fischer, M. E. Hamid, S. Michalke, W. Ludwig, and H. Mauch. 1998. Differentiation of phylogenetically related slowly growing mycobacte-ria based on 16S-23S rRNA gene internal transcribed spacer sequences. J. Clin. Microbiol. 36:139-147.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 139-147
    • Roth, A.1    Fischer, M.2    Hamid, M.E.3    Michalke, S.4    Ludwig, W.5    Mauch, H.6
  • 18
    • 0032924576 scopus 로고    scopus 로고
    • Mycobacterium sp. as'a possible cause of hypersensitivity pneumonitis in machine workers
    • Shelton, G. B., W. D. Flanders, and K. G. Morris. 1999. Mycobacterium sp. as'a possible cause of hypersensitivity pneumonitis in machine workers. Emerg. Infect. Dis. 5:270-273.
    • (1999) Emerg. Infect. Dis. , vol.5 , pp. 270-273
    • Shelton, G.B.1    Flanders, W.D.2    Morris, K.G.3
  • 19
    • 0019857162 scopus 로고
    • Identification of clinically significant Mycobacterium fortuitum complex isolates
    • Silcox, V. A., R. C. Cood, and M. M. Floyd. 1981. Identification of clinically significant Mycobacterium fortuitum complex isolates. J. Clin. Microbiol. 14:686-691.
    • (1981) J. Clin. Microbiol. , vol.14 , pp. 686-691
    • Silcox, V.A.1    Cood, R.C.2    Floyd, M.M.3
  • 20
    • 0031059946 scopus 로고    scopus 로고
    • Routine use of PCR-restriction fragment length polymorphism analysis for identification of mycobacteria growing in liquid media
    • Taylor, T. B., C. Patterson, Y. Hale, and W. W. Safranek. 1997. Routine use of PCR-restriction fragment length polymorphism analysis for identification of mycobacteria growing in liquid media. J. Clin. Microbiol. 35:79-85.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 79-85
    • Taylor, T.B.1    Patterson, C.2    Hale, Y.3    Safranek, W.W.4
  • 21
    • 0027514742 scopus 로고
    • Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis
    • Telenti, A., F. Marchesi, M. Balz, F. Bally, E. C. Böttger, and T. Bodmer. 1993. Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis. J. Clin. Microbiol. 31:175-178.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 175-178
    • Telenti, A.1    Marchesi, F.2    Balz, M.3    Bally, F.4    Böttger, E.C.5    Bodmer, T.6
  • 22
    • 0034798093 scopus 로고    scopus 로고
    • Necessity of quality-controlled 16S rRNA gene sequence databases: Identifying nontuberculous Mycobacterium species
    • Turenne, C. Y., L. Tschetter, J. Wolfe, and A. Kabani. 2001. Necessity of quality-controlled 16S rRNA gene sequence databases: identifying nontuberculous Mycobacterium species. J. Clin, Microbiol. 39:3637-3648.
    • (2001) J. Clin, Microbiol. , vol.39 , pp. 3637-3648
    • Turenne, C.Y.1    Tschetter, L.2    Wolfe, J.3    Kabani, A.4
  • 23
    • 0028491253 scopus 로고
    • Development of a 23S rRNA-based PCR assay for the detection of mycobacteria
    • Verma, A., A. Rattan, and J. S. Tyagi. 1994. Development of a 23S rRNA-based PCR assay for the detection of mycobacteria. Indian J. Biochem. Biophys. 31:288-294.
    • (1994) Indian J. Biochem. Biophys. , vol.31 , pp. 288-294
    • Verma, A.1    Rattan, A.2    Tyagi, J.S.3
  • 26
    • 0242385400 scopus 로고    scopus 로고
    • DNA-based methodologies for rapid detection, quantification, and species- Or strain-level identification of respiratory pathogens (Mycobacteria and Pseudomonads) in metalworking fluids
    • Yadav, J. S., I. U. H. Khan, F. Fakhari, and M. B. Soellner. 2003. DNA-based methodologies for rapid detection, quantification, and species- or strain-level identification of respiratory pathogens (Mycobacteria and Pseudomonads) in metalworking fluids. Appl. Occup. Environ. Hyg. 18:966-975.
    • (2003) Appl. Occup. Environ. Hyg. , vol.18 , pp. 966-975
    • Yadav, J.S.1    Khan, I.U.H.2    Fakhari, F.3    Soellner, M.B.4


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