In vitro and intra-macrophage gene expression by Rhodococcus equi strain 103

Veterinary Microbiology

Volumn 110, Issue 1-2, 2005, Pages 131-140

  Rahman, Md Tanvir ^a   Parreira, Valeria ^a   Prescott, John F ^a  

^a UNIVERSITY OF GUELPH   (Canada)

Author keywords

Chromosomal genes; DNA microarray; Rhodococcus equi; Virulence

Indexed keywords

CHAPERONE; DNA; FATTY ACID; HEME; HYDROGEN PEROXIDE; LIPID; SIGMA FACTOR;

ACIDITY; ARTICLE; BACTERIAL CHROMOSOME; BACTERIAL GENOME; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIAL SURVIVAL; BACTERIAL VIRULENCE; CONTROLLED STUDY; DNA MICROARRAY; FATTY ACID METABOLISM; GENE EXPRESSION; GENE IDENTIFICATION; GENE SEQUENCE; GENETIC CODE; GENETIC TRANSCRIPTION; HEME SYNTHESIS; IRON METABOLISM; LIPID METABOLISM; MACROPHAGE; NONHUMAN; REACTION TIME; RHODOCOCCUS EQUI; STATISTICAL SIGNIFICANCE; TEMPERATURE; TRANSCRIPTION REGULATION;

ACTINOMYCETALES INFECTIONS; ANIMALS; ANIMALS, NEWBORN; GENE EXPRESSION REGULATION, BACTERIAL; HORSE DISEASES; HORSES; MACROPHAGES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PLASMIDS; RHODOCOCCUS EQUI; RNA, BACTERIAL; VIRULENCE;

EQUIDAE; RHODOCOCCUS EQUI;

EID: 24644493345     PISSN: 03781135     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.vetmic.2005.08.005     Document Type: Article

References (43)

1. M. Almiron, M. Martinez, N. Sanjuan, and R.A. Ugalde Ferrochelatase is present in Brucella abortus and is critical for its intracellular survival and virulence Infect. Immun. 9 2001 6225 6230
2. 2, which causes macrophage-related stress, triggers induction of expression of virulence-associated plasmid determinants in Rhodococcus equi Infect. Immun. 70 2002 3768 3776
3. C.A. Boland, and W.G. Meijer The iron dependent regulatory protein IdeR (DtxR) of Rhodococcus equi FEMS Microbiol. Lett. 191 2000 1 5
4. P.D. Butcher Microarrays for Mycobacterium tuberculosis Tuberculosis (Edinb) 84 2004 131 137
5. H. Calamita, C. Ko, S. Tyagi, T. Yoshimatsu, N.E. Morrison, and W.R. Bishai The Mycobacterium tuberculosis SigD sigma factor controls the expression of ribosome-associated gene products in stationary phase and is required for full virulence Cell Microbiol. 7 2005 233 244
6. A. Chastanet, I. Derre, S. Nair, and T. Msadek clpB, a novel member of the Listeria monocytogenes CtsR regulon, is involved in virulence but not in general stress tolerance J. Bacteriol. 186 2004 1165 1174
7. P.A. Darrah, M.K. Hondalus, Q. Chen, H. Ischiropoulos, and D.M. Mosser Cooperation between reactive oxygen and nitrogen intermediates in killing of Rhodococcus equi by activated macrophages Infect. Immun. 68 2000 3587 3593
8. J. DeMaio, Y. Zhang, C. Ko, D.B. Young, and W.R. Bishai A stationary-phase stress-response sigma factor from Mycobacterium tuberculosis Proc. Natl. Acad. Sci. USA 93 1996 2790 2794
9. J. De Voss, K. Rutter, B. Schroeder, H. Su, Y. Zhu, and C. Barry The salicylate-derived mycobactin siderophores of Mycobacterium tuberculosis are essential for growth in macrophages Proc. Natl. Acad. Sci. USA 97 2000 1252 1257
10. E. Ekaza, J. Teyssier, S. Ouahrani-Bettache, J.P. Liautard, and S. Kohler Characterization of Brucella suis clpB and clpAB mutants and participation of the genes in stress responses J. Bacteriol. 183 2001 2677 2681
11. E. Fernandez-Mora, M. Polidori, A. Luhrmann, U.E. Schaible, and A. Haas Maturation of Rhodococcus equi-containing vacuoles is arrested after completion of the early endosome stage Traffic 6 2005 635 653
12. M.A. Fisher, B.B. Plikaytis, and T.M. Shinnick Microarray analysis of the Mycobacterium tuberculosis transcriptional response to the acidic conditions found in phagosomes J. Bacteriol. 184 2002 4025 4032
13. G. Harth, M.A. Horwitz, D. Tabatadze, and P.C. Zamecnik Targeting the Mycobacterium tuberculosis 30/32 kDa mycolyl transferase complex as a therapeutic strategy against tuberculosis: proof of principle by using antisense technology Proc. Natl. Acad. Sci. USA 99 2002 15614 15619
14. J.Y. Hou, J.E. Graham, and J.E. Clark-Curtiss Mycobacterium avium genes expressed during growth in human macrophages detected by selective capture of transcribed sequences (SCOTS) Infect. Immun. 70 2002 3714 3726
15. S.L. Kendall, S.C. Rison, F. Movahedzadeh, R. Frita, and N.G. Stoker What do microarrays really tell us about M. tuberculosis? Trends Microbiol. 12 2004 537 544
16. B.Y. Lee, and M.A. Horwitz Identification of macrophage and stress-induced proteins of Mycobacterium tuberculosis J. Clin. Invest. 96 1995 245 249
17. Z. Li, C. Kelley, F. Collins, D. Rouse, and S. Morris Expression of katG in Mycobacterium tuberculosis is associated with its growth and persistence in mice and guinea pigs J. Infect. Dis. 177 1998 1030 1035
18. R. Manganelli, M.I. Voskuil, G.K. Schoolnik, and I. Smith The Mycobacterium tuberculosis ECF sigma factor sigmaE: role in global gene expression and survival in macrophages Mol. Microbiol. 41 2001 423 437
19. J.D. McKinney, K. Höner zu Bentrup, E.J. Munoz-Elias, A. Miczak, B. Chen, W.T. Chan, D. Swenson, J.C. Sacchettini, W.R. Jacobs Jr., and D.G. Russell Nature 406 2000 735 738
20. W.G. Meijer, and J.F. Prescott Rhodococcus equi Vet. Res. 25 2004 1 14
21. R. Miranda-CasoLuengo, P.S. Duffy, E.P. O'Connell, B.J. Graham, M.W. Mangan1, J.F. Prescott, and W.G. Meijer The iron regulated iupABC operon is required for saprophytic growth of the intracellular pathogen Rhodococcus equi at low iron concentrations J. Bacteriol. 187 2005 3438 3444
22. I.M. Monahan, J. Betts, D.K. Banerjee, and P.D. Butcher Differential expression of mycobacterial proteins following phagocytosis by macrophages Microbiology 147 2001 459 471
23. J. Navas, B. Gonzalez-Zorn, N. Ladron, P. Garrido, and J. Vazquez-Boland Identification and mutagenesis by allelic exchange of choE, encoding a cholesterol oxidase from the intracellular pathogen Rhodococcus equi J. Bacteriol. 183 2001 4796 4805
24. T. Parish, D.A. Smith, G. Roberts, J. Betts, and N.G. Stoker The senX3-regX3 two-component regulatory system of Mycobacterium tuberculosis is required for virulence Microbiology 149 2003 1423 1435
25. L.L. Pedersen, M. Radulic, M. Doric, and Y. Abu Kwaik htrA homologue of Legionella pneumophila: an indispensable element for intracellular infection of mammalian but not protozoan cells Infect. Immun. 69 2001 2569 2579
26. Perez, E., Samper, S., Bordas, Y., Guilhot, C., Gicquel, B., Martin, C., 2001. An essential role for phoP in Mycobacterium tuberculosis virulence. Mol. Microbiol.
27. M.T. Rahman, L.L. Herron, V. Kapur, W.G. Meijer, B.A. Byrne, J. Ren, V.N. Nicholson, and J.F. Prescott Partial genome sequencing of Rhodococcus equi ATCC 33701 Vet. Microbiol. 94 2003 143 158
28. J. Ren, and J.F. Prescott Analysis of virulence plasmid gene expression of intra-macrophage and in vitro grown Rhodococcus equi ATCC 33701 Vet. Microbiol. 94 2003 167 182
29. J. Ren, and J.F. Prescott The effect of mutation on Rhodococcus equi virulence plasmid gene expression and mouse virulence Vet. Microbiol. 103 2004 219 230
30. G.M. Rodriguez, M.I. Voskuil, B. Gold, G.K. Schoolnik, and I. Smith ideR, an essential gene in Mycobacterium tuberculosis: role of IdeR in iron-dependent gene expression, iron metabolism, and oxidative stress response Infect. Immun. 70 2002 3371 3381
31. D.A. Russell, G.A. Byrne, E.P. O'Connell, C.A. Boland, and W.G. Meijer The LysR-type transcriptional regulator VirR is required for expression of the virulence gene vapA of Rhodococcus equi ATCC 33701 J. Bacteriol. 186 2004 5576 5584
32. A. Singh, S. Jain, S. Gupta, T. Das, and A. Tyagi mymA operon of Mycobacterium tuberculosis: its regulation and importance in the cell envelope FEMS Microbiol. Lett. 227 2003 53 63
33. C.V. Smith, C.C. Huang, A. Miczak, D.G. Russell, J.C. Sacchettini, and K.H. Bentrup Biochemical and structural studies of malate synthase from Mycobacterium tuberculosis J. Biol. Chem. 278 2003 1735 1743
34. I. Smith Mycobacterium tuberculosis pathogenesis and molecular determinants of virulence Clin. Microbiol. Rev. 16 2003 463 496
35. S. Takai, Y. Sasaki, T. Ikeda, Y. Uchida, S. Tsubaki, and T. Sekizaki Virulence of Rhodococcus equi isolates from patients with and without AIDS J. Clin. Microbiol. 32 1994 457 460
36. S. Takai, S.A. Hines, T. Sekizaki, V.M. Nicholson, D.A. Alperin, M. Osaki, D. Takamatsu, M. Nakamura, K. Suzuki, N. Ogino, T. Kakuda, H. Dan, and J.F. Prescott DNA sequence and comparison of virulence plasmids from Rhodococcus equi ATCC 33701 and 103 Infect. Immun. 68 2000 6840 6847
37. A. Takaya, T. Tomoyasu, H. Matsui, and T. Yamamoto The DnaK/DnaJ chaperone machinery of Salmonella enterica Serovar Typhimurium is essential for invasion of epithelial cells and survival within macrophages, leading to systemic infection Infect. Immun. 72 2004 1364 1373
38. M.V. Tullius, G. Harth, and M.A. Horwitz Glutamine synthetase glnA1 is essential for growth of Mycobacterium tuberculosis in human THP-1 macrophages and guinea pigs Infect. Immun. 71 2003 3927 3936
39. V.G. Tusher, R. Tibshirani, and G. Chu Significance analysis of microarrays applied to the ionizing radiation response Proc. Natl. Acad. Sci. USA 98 2001 5116 5121
40. I. Weber, C. Fritz, S. Ruttkowski, A. Kreft, and F.C. Bange Anaerobic nitrate reductase (narGHJI) activity of Mycobacterium bovis BCG in vitro and its contribution to virulence in immunodeficient mice Mol. Microbiol. 35 2000 1017 1025
41. L. Wernisch, S.L. Kendall, S. Soneji, A. Wietzorrek, T. Parish, J. Hinds, P.D. Butcher, and N.G. Stoker Analysis of whole-genome microarray replicates using mixed models Bioinformatics 19 2003 53 61
42. R.J. Wilkinson, L.E. DesJardin, N. Islam, B.M. Gibson, R.A. Kanost, K.A. Wilkinson, D. Poelman, K.D. Eisenach, and Z. Toossi An increase in expression of a Mycobacterium tuberculosis mycolyl transferase gene (fbpB) occurs early after infection of human monocytes Mol. Microbiol. 39 2001 813 821
43. R. Zhang, and C.T. Zhang Identification of genomic islands in the genome of Bacillus cereus by comparative analysis with Bacillus anthracis Physiol. Genomics 16 2003 19 23