SCOPUS 정보 검색 플랫폼

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 35, 2005, Pages 12401-12406

A funneled energy landscape for cytochrome c directly predicts the sequential folding route inferred from hydrogen exchange experiments

(3) Weinkam, Patrick a Zong, Chenghang a Wolynes, Peter G a

a UNIVERSITY OF CALIFORNIA (United States)

Author keywords

Contact density; Foldon; Heme cofactor; Nucleation

Indexed keywords

CYTOCHROME C; HEME;

ARTICLE; ENERGY; GEOMETRY; MOLECULAR MODEL; PRIORITY JOURNAL; PROTEIN FOLDING; PROTEIN STABILITY; PROTON TRANSPORT;

BIOPHYSICS; CYTOCHROMES C; HEME; HYDROGEN; MODELS, MOLECULAR; PROTEIN CONFORMATION; PROTEIN FOLDING; THERMODYNAMICS;

EID: 24644481440 PISSN: 00278424 EISSN: None Source Type: Journal
DOI: 10.1073/pnas.0505274102 Document Type: Article

Times cited : (79)

References (43)

1
- 0003818541
- Freeman, New York
- Fersht, A. (1999) Structure and Mechanism in Protein Science: A Guide to Enzyme Catalysis and Protein Folding (Freeman, New York).
- (1999) Structure and Mechanism in Protein Science: A Guide to Enzyme Catalysis and Protein Folding
- Fersht, A.¹

2
- 0345255608
- Gianni, S., Guydosh, N. R., Khan, F., Caldas, T. D., Mayor, U., White, G. W. N., DeMarco, M. L., Daggett, V. & Fersht, A. R. (2003) Proc. Natl. Acad. Sci. USA 100, 13286-13291.
- (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 13286-13291
- Gianni, S.¹ Guydosh, N.R.² Khan, F.³ Caldas, T.D.⁴ Mayor, U.⁵ White, G.W.N.⁶ DeMarco, M.L.⁷ Daggett, V.⁸ Fersht, A.R.⁹

3
- 0028947257
- Bryngelson, J. D., Onuchic, J. N., Socci, N. D. & Wolynes, P. G. (1995) Proteins 21, 167-195.
- (1995) Proteins , vol.21 , pp. 167-195
- Bryngelson, J.D.¹ Onuchic, J.N.² Socci, N.D.³ Wolynes, P.G.⁴

4
- 0032147243
- Socci, N. D., Onuchic, J. N. & Wolynes, P. G. (1998) Proteins 32, 136-158.
- (1998) Proteins , vol.32 , pp. 136-158
- Socci, N.D.¹ Onuchic, J.N.² Wolynes, P.G.³

5
- 0034687712
- Hardin, C., Eastwood, M., Luthey-Schulten, Z. & Wolynes, P. G. (2000) Proc. Natl. Acad. Sci. USA 97, 14235-14240.
- (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 14235-14240
- Hardin, C.¹ Eastwood, M.² Luthey-Schulten, Z.³ Wolynes, P.G.⁴

6
- 0030979740
- Wolynes, P. G. (1997) Proc. Natl. Acad. Sci. USA 94, 6170-6175.
- (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 6170-6175
- Wolynes, P.G.¹

7
- 0017842051
- Ueda, Y., Taketomi, H. & Go, N. (1978) Biopolymers 17, 1531-1548.
- (1978) Biopolymers , vol.17 , pp. 1531-1548
- Ueda, Y.¹ Taketomi, H.² Go, N.³

8
- 0033515615
- Shoemaker, B. A., Wang, J. & Wolynes, P. G. (1999) J. Mol. Biol. 287, 675-694.
- (1999) J. Mol. Biol. , vol.287 , pp. 675-694
- Shoemaker, B.A.¹ Wang, J.² Wolynes, P.G.³

9
- 0034705115
- Clementi, C., Jennings, P. A. & Onuchic, J. N. (2000) Proc. Natl. Acad. Sci. USA 97, 5871-5876.
- (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 5871-5876
- Clementi, C.¹ Jennings, P.A.² Onuchic, J.N.³

10
- 0033613255
- Alm, E. & Baker, D. (1999) Proc. Natl. Acad. Sci. USA 96, 11305-11310.
- (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 11305-11310
- Alm, E.¹ Baker, D.²

11
- 0033613165
- Munoz, V. & Eaton, W. A. (1999) Proc. Natl. Acad. Sci. USA 96, 11311-11316.
- (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 11311-11316
- Munoz, V.¹ Eaton, W.A.²

12
- 0034685604
- Clementi, C., Nymeyer, H. & Onuchic, J. N. (2000) J. Mol. Biol. 298, 937-953.
- (2000) J. Mol. Biol. , vol.298 , pp. 937-953
- Clementi, C.¹ Nymeyer, H.² Onuchic, J.N.³

13
- 0035943433
- Clementi, C., Jennings, P. A. & Onuchic, J. N. (2001) J. Mol. Biol. 311, 879-890.
- (2001) J. Mol. Biol. , vol.311 , pp. 879-890
- Clementi, C.¹ Jennings, P.A.² Onuchic, J.N.³

14
- 0033613131
- Galzitskaya, O. V. & Finkelstein, A. V. (1999) Proc. Natl. Acad. Sci. USA 96, 11299-11304.
- (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 11299-11304
- Galzitskaya, O.V.¹ Finkelstein, A.V.²

15
- 0035850732
- Koga, N. & Takada, S. (2001) J. Mol. Biol. 313, 171-180.
- (2001) J. Mol. Biol. , vol.313 , pp. 171-180
- Koga, N.¹ Takada, S.²

16
- 0029643523
- Bai, Y., Sosnick, T. R., Mayne, L. & Englander, S. W. (1995) Science 269, 192-197.
- (1995) Science , vol.269 , pp. 192-197
- Bai, Y.¹ Sosnick, T.R.² Mayne, L.³ Englander, S.W.⁴

17
- 4644359012
- Maity, H., Maity, M. & Englander, S. W. (2004) J. Mol. Biol. 343, 223-233.
- (2004) J. Mol. Biol. , vol.343 , pp. 223-233
- Maity, H.¹ Maity, M.² Englander, S.W.³

18
- 0035793103
- Rumbley, J., Hoang, L., Mayne, L. & Englander, S. W. (2001) Proc. Natl. Acad. Sci. USA 98, 105-112.
- (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 105-112
- Rumbley, J.¹ Hoang, L.² Mayne, L.³ Englander, S.W.⁴

19
- 0026009213
- Jeng, M. F. & Englander, S. W. (1991) J. Mol. Biol. 221, 1045-1061.
- (1991) J. Mol. Biol. , vol.221 , pp. 1045-1061
- Jeng, M.F.¹ Englander, S.W.²

20
- 16344382372
- Maity, H., Maity, M., Krishna, M. M. G., Mayne, L. & Englander, S. W. (2005) Proc. Natl. Acad. Sci. USA 102, 4741-4746.
- (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 4741-4746
- Maity, H.¹ Maity, M.² Krishna, M.M.G.³ Mayne, L.⁴ Englander, S.W.⁵

21
- 0036005637
- Wittung-Stafshede, P. (2002) Acc. Chem. Res. 35, 201-208.
- (2002) Acc. Chem. Res. , vol.35 , pp. 201-208
- Wittung-Stafshede, P.¹

22
- 0001683768
- Friedrichs, M. S. & Wolynes, P. G. (1989) Science 246, 371-373.
- (1989) Science , vol.246 , pp. 371-373
- Friedrichs, M.S.¹ Wolynes, P.G.²

23
- 5544276469
- Sasai, M. & Wolynes, P. G. (1992) Phys. Rev. A 46, 7979-7997.
- (1992) Phys. Rev. A , vol.46 , pp. 7979-7997
- Sasai, M.¹ Wolynes, P.G.²

24
- 0007463680
- Plotkin, S. S., Wang, J. & Wolynes, P. G. (1997) J. Chem. Phys. 106, 2932-2948.
- (1997) J. Chem. Phys. , vol.106 , pp. 2932-2948
- Plotkin, S.S.¹ Wang, J.² Wolynes, P.G.³

25
- 0035826032
- Eastwood, M. P. & Wolynes, P. G. (2001) J. Chem. Phys. 114, 4702-4716.
- (2001) J. Chem. Phys. , vol.114 , pp. 4702-4716
- Eastwood, M.P.¹ Wolynes, P.G.²

26
- 0029809182
- Kolinski, A., Galazka, W. & Skolnick, J. (1996) Proteins 26, 271-287.
- (1996) Proteins , vol.26 , pp. 271-287
- Kolinski, A.¹ Galazka, W.² Skolnick, J.³

27
- 10844267966
- Kaya, H. & Chan, H. S. (2005) Proteins 58, 31-44.
- (2005) Proteins , vol.58 , pp. 31-44
- Kaya, H.¹ Chan, H.S.²

28
- 4644259872
- Ejtehadi, M. R., Avall, S. P. & Plotkin, S. S. (2004) Proc. Natl. Acad. Sci. USA 101, 15088-15093.
- (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 15088-15093
- Ejtehadi, M.R.¹ Avall, S.P.² Plotkin, S.S.³

29
- 0035197324
- Erman, B. (2001) Biophys. J. 81, 3534-3544.
- (2001) Biophys. J. , vol.81 , pp. 3534-3544
- Erman, B.¹

30
- 0344407048
- Cárdenas, A. E. & Elber, R. (2003) Proteins 51, 245-257.
- (2003) Proteins , vol.51 , pp. 245-257
- Cárdenas, A.E.¹ Elber, R.²

31
- 33646940952
- Ryckaert, J., Ciccotti, G. & Berendsen, H. (1977) J. Comp. Phys. 23, 327-341.
- (1977) J. Comp. Phys. , vol.23 , pp. 327-341
- Ryckaert, J.¹ Ciccotti, G.² Berendsen, H.³

32
- 84986519238
- Kumar, S., Rosenberg, J. M., Bouzida, D., Swendsen, R. H. & Kollman, P. A. (1992) J. Comput. Chem. 13, 1011-1021.
- (1992) J. Comput. Chem. , vol.13 , pp. 1011-1021
- Kumar, S.¹ Rosenberg, J.M.² Bouzida, D.³ Swendsen, R.H.⁴ Kollman, P.A.⁵

33
- 0000009443
- McLachlan, A. D. (1982) Acta Crystallogr. A 38, 871-873.
- (1982) Acta Crystallogr. A , vol.38 , pp. 871-873
- McLachlan, A.D.¹

34
- 0035868476
- Portman, J. J., Takada, S. & Wolynes, P. G. (2001) J. Chem. Phys 114, 5069-5081.
- (2001) J. Chem. Phys , vol.114 , pp. 5069-5081
- Portman, J.J.¹ Takada, S.² Wolynes, P.G.³

35
- 17844377028
- Shen, T., Hofmann, C. F., Oliveberg, M. & Wolynes, P. G. (2005) Biochemistry 44, 6433-6439.
- (2005) Biochemistry , vol.44 , pp. 6433-6439
- Shen, T.¹ Hofmann, C.F.² Oliveberg, M.³ Wolynes, P.G.⁴

36
- 0034737327
- Hagen, S. J. & Eaton, W. A. (2000) J. Mol. Biol. 297, 781-789.
- (2000) J. Mol. Biol. , vol.297 , pp. 781-789
- Hagen, S.J.¹ Eaton, W.A.²

37
- 0037132584
- Lyubovitsky, J. G., Gray, H. B. & Winkler, J. R. (2002) J. Am. Chem. Soc. 124, 14840-14841.
- (2002) J. Am. Chem. Soc. , vol.124 , pp. 14840-14841
- Lyubovitsky, J.G.¹ Gray, H.B.² Winkler, J.R.³

38
- 7444252271
- Zhong, S., Rousseau, D. L. & Yeh, S. (2004) J. Am. Chem. Soc. 126, 13934-13935.
- (2004) J. Am. Chem. Soc. , vol.126 , pp. 13934-13935
- Zhong, S.¹ Rousseau, D.L.² Yeh, S.³

39
- 0036440985
- Krantz, B. A., Mayne, L., Rumbley, J., Englander, S. W. & Sosnick, T. R. (2002) J. Mol. Biol. 324, 359-371.
- (2002) J. Mol. Biol. , vol.324 , pp. 359-371
- Krantz, B.A.¹ Mayne, L.² Rumbley, J.³ Englander, S.W.⁴ Sosnick, T.R.⁵

40
- 0029922493
- Panchenko, A. R., Luthey-Schulten, Z. & Wolynes, P. G. (1996) Proc. Natl. Acad. Sci. USA 93, 2008-2013.
- (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 2008-2013
- Panchenko, A.R.¹ Luthey-Schulten, Z.² Wolynes, P.G.³

41
- 0022234783
- Go, M. (1985) Adv. Biophys. 19, 91-131.
- (1985) Adv. Biophys. , vol.19 , pp. 91-131
- Go, M.¹

42
- 0033515614
- Shoemaker, B. A. & Wolynes, P. G. (1999) J. Mol. Biol. 287, 657-674.
- (1999) J. Mol. Biol. , vol.287 , pp. 657-674
- Shoemaker, B.A.¹ Wolynes, P.G.²

43
- 0033607208
- Shea, J. E. & Onuchic, J. N. (1999) Proc. Natl. Acad. Sci. USA 96, 12512-12517.
- (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 12512-12517
- Shea, J.E.¹ Onuchic, J.N.²

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.