메뉴 건너뛰기




Volumn 42, Issue 5, 2004, Pages 2074-2079

PCR-Based Assay for Differentiation of Pseudomonas aeruginosa from Other Pseudomonas Species Recovered from Cystic Fibrosis Patients

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; DNA 16S; DNA FRAGMENT; RIBOSOME DNA;

EID: 2442610844     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.42.5.2074-2079.2004     Document Type: Article
Times cited : (401)

References (35)
  • 3
    • 0141539348 scopus 로고    scopus 로고
    • Development of a diagnostic PCR assay that targets a heat-shock protein gene (groES) for detection of Pseudomonas spp. in cystic fibrosis patients
    • Clarke, L., J. E. Moore, B. C. Millar, L. Garske, J. Xu, M. W. Heuzenroeder, M. Crowe, and J. S. Elborn. 2003. Development of a diagnostic PCR assay that targets a heat-shock protein gene (groES) for detection of Pseudomonas spp. in cystic fibrosis patients. J. Med. Microbiol. 52:759-763.
    • (2003) J. Med. Microbiol. , vol.52 , pp. 759-763
    • Clarke, L.1    Moore, J.E.2    Millar, B.C.3    Garske, L.4    Xu, J.5    Heuzenroeder, M.W.6    Crowe, M.7    Elborn, J.S.8
  • 5
    • 0041810321 scopus 로고    scopus 로고
    • Classification of Ralstonia pickettii-like isolates from the environment and clinical samples as Ralstonia insidiosa sp. nov.
    • Coenye, T., J. Goris, P. De Vos, P. Vandamme, and J. J. LiPuma. 2003. Classification of Ralstonia pickettii-like isolates from the environment and clinical samples as Ralstonia insidiosa sp. nov. Int. J. Syst. Evol. Microbiol. 53:1075-1080.
    • (2003) Int. J. Syst. Evol. Microbiol. , vol.53 , pp. 1075-1080
    • Coenye, T.1    Goris, J.2    De Vos, P.3    Vandamme, P.4    LiPuma, J.J.5
  • 6
    • 0036265949 scopus 로고    scopus 로고
    • Characterization of unusual bacteria isolated from respiratory secretions of cystic fibrosis patients and description of Inquilinus limosus gen. nov., sp. nov.
    • Coenye, T., J. Goris, T. Spilker, P. Vandamme, and J. J. LiPuma. 2002. Characterization of unusual bacteria isolated from respiratory secretions of cystic fibrosis patients and description of Inquilinus limosus gen. nov., sp. nov. J. Clin. Microbiol. 40:2062-2069.
    • (2002) J. Clin. Microbiol. , vol.40 , pp. 2062-2069
    • Coenye, T.1    Goris, J.2    Spilker, T.3    Vandamme, P.4    LiPuma, J.J.5
  • 7
    • 0035208858 scopus 로고    scopus 로고
    • Identification of Pandoraea species by 16S ribosomal DNA-based PCR assays
    • Coenye, T., L. Liu, P. Vandamme, and J. J. LiPuma. 2001. Identification of Pandoraea species by 16S ribosomal DNA-based PCR assays. J. Clin. Microbiol. 39:4452-4455.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 4452-4455
    • Coenye, T.1    Liu, L.2    Vandamme, P.3    LiPuma, J.J.4
  • 8
    • 0036310831 scopus 로고    scopus 로고
    • Infection by Ralstonia species in cystic fibrosis patients: Identification of R. pickettii and R. mannitolilytica by polymerase chain reaction
    • Coenye, T., P. Vandamme, and J. J. LiPuma. 2002. Infection by Ralstonia species in cystic fibrosis patients: identification of R. pickettii and R. mannitolilytica by polymerase chain reaction. Emerg. Infect. Dis. 8:692-696.
    • (2002) Emerg. Infect. Dis. , vol.8 , pp. 692-696
    • Coenye, T.1    Vandamme, P.2    LiPuma, J.J.3
  • 9
    • 0038105921 scopus 로고    scopus 로고
    • Cystic Fibrosis Foundation, Bethesda, Md.
    • Cystic Fibrosis Foundation. 2001. Patient registry 2001. Annual data report. Cystic Fibrosis Foundation, Bethesda, Md.
    • (2001) Patient Registry 2001. Annual Data Report
  • 10
    • 0032885134 scopus 로고    scopus 로고
    • PCR identification of Pseudomonas aeruginosa and direct detection in clinical samples from cystic fibrosis patients
    • da Silva Filho, L. V., J. E. Levi, C. N. Oda Bento, S. R. da Silva Ramos, and T. Rozov. 1999. PCR identification of Pseudomonas aeruginosa and direct detection in clinical samples from cystic fibrosis patients. J. Med. Microbiol. 48:357-361.
    • (1999) J. Med. Microbiol. , vol.48 , pp. 357-361
    • Da Silva Filho, L.V.1    Levi, J.E.2    Oda Bento, C.N.3    Da Silva Ramos, S.R.4    Rozov, T.5
  • 11
    • 0030962273 scopus 로고    scopus 로고
    • Direct detection and identification of Pseudomonas aeruginosa in clinical samples such as skin biopsy specimens and expectorations by multiplex PCR based on two outer membrane lipoprotein genes, oprI and oprL
    • De Vos, D., A. Lim, Jr., J. P. Pirnay, M. Struelens, C. Vandenvelde, L. Duinslaeger, A. Vanderkelen, and P. Cornelis. 1997. Direct detection and identification of Pseudomonas aeruginosa in clinical samples such as skin biopsy specimens and expectorations by multiplex PCR based on two outer membrane lipoprotein genes, oprI and oprL. J. Clin. Microbiol. 35:1295-1299.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 1295-1299
    • De Vos, D.1    Lim Jr., A.2    Pirnay, J.P.3    Struelens, M.4    Vandenvelde, C.5    Duinslaeger, L.6    Vanderkelen, A.7    Cornelis, P.8
  • 12
    • 0035163562 scopus 로고    scopus 로고
    • Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA
    • Duineveld, B. M., G. A. Kowalchuk, A. Keijzer, J. D. van Elsas, and J. A. van Veen. 2001. Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA. Appl. Environ. Microbiol. 67:172-178.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 172-178
    • Duineveld, B.M.1    Kowalchuk, G.A.2    Keijzer, A.3    Van Elsas, J.D.4    Van Veen, J.A.5
  • 13
    • 0027195501 scopus 로고
    • Prognostic implications of initial oropharyngeal bacterial flora in patients with cystic fibrosis diagnosed before the age of two years
    • Hudson, V. L., C. L. Wielinski, and W. E. Regelmann. 1993. Prognostic implications of initial oropharyngeal bacterial flora in patients with cystic fibrosis diagnosed before the age of two years. J. Pediatr. 122:854-860.
    • (1993) J. Pediatr. , vol.122 , pp. 854-860
    • Hudson, V.L.1    Wielinski, C.L.2    Regelmann, W.E.3
  • 14
    • 0036846398 scopus 로고    scopus 로고
    • Increased treatment requirements of patients with cystic fibrosis who harbour a highly transmissible strain of Pseudomonas aeruginosa
    • Jones, A. M., M. E. Dodd, C. J. Doherty, J. R. W. Govan, and A. K. Webb. 2002. Increased treatment requirements of patients with cystic fibrosis who harbour a highly transmissible strain of Pseudomonas aeruginosa. Thorax 57:924-925.
    • (2002) Thorax , vol.57 , pp. 924-925
    • Jones, A.M.1    Dodd, M.E.2    Doherty, C.J.3    Govan, J.R.W.4    Webb, A.K.5
  • 15
    • 0034837654 scopus 로고    scopus 로고
    • Evaluation of the VITEK 2 system for the identification and susceptibility testing of three species of nonfermenting gram-negative rods frequently isolated from clinical samples
    • Joyanes, P., M. del Carmen Conejo, L. Martinez-Martinez, and E. J. Perea. 2001. Evaluation of the VITEK 2 system for the identification and susceptibility testing of three species of nonfermenting gram-negative rods frequently isolated from clinical samples. J. Clin. Microbiol. 39:3247-3253.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 3247-3253
    • Joyanes, P.1    Del Carmen Conejo, M.2    Martinez-Martinez, L.3    Perea, E.J.4
  • 16
    • 0030446950 scopus 로고    scopus 로고
    • Polymerase chain reaction for the detection of Pseudomonas aeruginosa, Stenotrophomonas maltophilia and Burkholderia cepacia in sputum of patients with cystic fibrosis
    • Karpati, F., and J. Jonasson. 1996. Polymerase chain reaction for the detection of Pseudomonas aeruginosa, Stenotrophomonas maltophilia and Burkholderia cepacia in sputum of patients with cystic fibrosis. Mol. Cell. Probes 10:3974-03.
    • (1996) Mol. Cell. Probes , vol.10 , pp. 3974-3903
    • Karpati, F.1    Jonasson, J.2
  • 17
    • 0028087998 scopus 로고
    • Detection of Pseudomonas aeruginosa from clinical and environmental samples by amplification of the exotoxin A gene using PCR
    • Khan, A. A., and C. E. Cerniglia. 1994. Detection of Pseudomonas aeruginosa from clinical and environmental samples by amplification of the exotoxin A gene using PCR. Appl. Environ. Microbiol. 60:3739-3745.
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 3739-3745
    • Khan, A.A.1    Cerniglia, C.E.2
  • 18
    • 9044244529 scopus 로고    scopus 로고
    • Accuracy of four commercial systems for identification of Burkholderia cepacia and other gram-negative nonfermenting bacilli recovered from patients with cystic fibrosis
    • Kiska, D. L., A. Kerr, M. C. Jones, J. A. Caracciolo, B. Eskridge, M. Jordan, S. Miller, D. Hughes, N. King, and P. H. Gilligan. 1996. Accuracy of four commercial systems for identification of Burkholderia cepacia and other gram-negative nonfermenting bacilli recovered from patients with cystic fibrosis. J. Clin. Microbiol. 34:886-891.
    • (1996) J. Clin. Microbiol. , vol.34 , pp. 886-891
    • Kiska, D.L.1    Kerr, A.2    Jones, M.C.3    Caracciolo, J.A.4    Eskridge, B.5    Jordan, M.6    Miller, S.7    Hughes, D.8    King, N.9    Gilligan, P.H.10
  • 19
    • 0036708203 scopus 로고    scopus 로고
    • Early infection and progression of cystic fibrosis lung disease
    • Koch, C. 2002. Early infection and progression of cystic fibrosis lung disease. Pediatr. Pulmonol. 34:232-236.
    • (2002) Pediatr. Pulmonol. , vol.34 , pp. 232-236
    • Koch, C.1
  • 20
    • 0242621134 scopus 로고    scopus 로고
    • Burkholderia and emerging pathogens in cystic fibrosis
    • LiPuma, J. J. 2003. Burkholderia and emerging pathogens in cystic fibrosis. Semin. Respir. Crit. Care Med. 24:681-692.
    • (2003) Semin. Respir. Crit. Care Med. , vol.24 , pp. 681-692
    • LiPuma, J.J.1
  • 21
    • 0032850938 scopus 로고    scopus 로고
    • Development of rRNA-based PCR assays for identification of Burkholderia cepacia complex isolates recovered from cystic fibrosis patients
    • LiPuma, J. J., B. J. Dulaney, J. D. McMenamin, P. W. Whitby, T. L. Stull, T. Coenye, and P. Vandamme. 1999. Development of rRNA-based PCR assays for identification of Burkholderia cepacia complex isolates recovered from cystic fibrosis patients. J. Clin. Microbiol. 37:3167-3170.
    • (1999) J. Clin. Microbiol. , vol.37 , pp. 3167-3170
    • LiPuma, J.J.1    Dulaney, B.J.2    McMenamin, J.D.3    Whitby, P.W.4    Stull, T.L.5    Coenye, T.6    Vandamme, P.7
  • 22
    • 0036211537 scopus 로고    scopus 로고
    • Ribosomal DNA-directed PCR for identification of Achromobacter (Alcaligenes) xylosoxidans recovered from sputum samples from cystic fibrosis patients
    • Liu, L., T. Coenye, J. L. Burns, P. W. Whitby, T. L. Stull, and J. J. LiPuma. 2002. Ribosomal DNA-directed PCR for identification of Achromobacter (Alcaligenes) xylosoxidans recovered from sputum samples from cystic fibrosis patients. J. Clin. Microbiol. 40:1210-1213.
    • (2002) J. Clin. Microbiol. , vol.40 , pp. 1210-1213
    • Liu, L.1    Coenye, T.2    Burns, J.L.3    Whitby, P.W.4    Stull, T.L.5    LiPuma, J.J.6
  • 23
    • 0036225688 scopus 로고    scopus 로고
    • Lung infections associated with cystic fibrosis
    • Lyczak, J. B., C. L. Cannon, and G. B. Pier. 2002. Lung infections associated with cystic fibrosis. Clin. Microbiol. Rev. 15:194-222.
    • (2002) Clin. Microbiol. Rev. , vol.15 , pp. 194-222
    • Lyczak, J.B.1    Cannon, C.L.2    Pier, G.B.3
  • 24
    • 0033827722 scopus 로고    scopus 로고
    • DNA-based diagnostic approaches for identification of Burkholderia cepacia complex, Burkholderia viemamiensis, Burkholderia multivorans, Burkholderia stabilis, and Burkholderia cepacia genomovars I and III
    • Mahenthiralingam, E., J. Bischof, S. K. Byrne, C. Radomski, J. E. Davies, Y. Av-Gay, and P. Vandamme. 2000. DNA-based diagnostic approaches for identification of Burkholderia cepacia complex, Burkholderia viemamiensis, Burkholderia multivorans, Burkholderia stabilis, and Burkholderia cepacia genomovars I and III. J. Clin. Microbiol. 39:3165-3173.
    • (2000) J. Clin. Microbiol. , vol.39 , pp. 3165-3173
    • Mahenthiralingam, E.1    Bischof, J.2    Byrne, S.K.3    Radomski, C.4    Davies, J.E.5    Av-Gay, Y.6    Vandamme, P.7
  • 25
    • 0026902247 scopus 로고
    • Detection of Pseudomonas aeruginosa in sputum from cystic fibrosis patients by the polymerase chain reaction
    • McIntosh, I., J. R. W. Govan, and D. J. H. Brock. 1992. Detection of Pseudomonas aeruginosa in sputum from cystic fibrosis patients by the polymerase chain reaction. Mol. Cell. Probes 6:299-304.
    • (1992) Mol. Cell. Probes , vol.6 , pp. 299-304
    • McIntosh, I.1    Govan, J.R.W.2    Brock, D.J.H.3
  • 26
    • 0034685940 scopus 로고    scopus 로고
    • High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection
    • Oliver, A., R. Canton, P. Campo, F. Baquero, and J. Blazquez. 2000. High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection. Science 288:1251-1253.
    • (2000) Science , vol.288 , pp. 1251-1253
    • Oliver, A.1    Canton, R.2    Campo, P.3    Baquero, F.4    Blazquez, J.5
  • 27
    • 0036829246 scopus 로고    scopus 로고
    • Multiple enzyme restriction fragment length polymorphism analysis for high resolution distinction of Pseudomonas (sensu stricto) 16S rRNA genes
    • Porteous, L. A., F. Widmer, and R. J. Seidler. 2002. Multiple enzyme restriction fragment length polymorphism analysis for high resolution distinction of Pseudomonas (sensu stricto) 16S rRNA genes. J. Microbiol. Methods 51:337-348.
    • (2002) J. Microbiol. Methods , vol.51 , pp. 337-348
    • Porteous, L.A.1    Widmer, F.2    Seidler, R.J.3
  • 28
    • 0041919310 scopus 로고    scopus 로고
    • Use of real-time PCR with multiple targets to identify Pseudomonas aeruginosa and other nonfermenting gram-negative bacilli from patients with cystic fibrosis
    • Qin, X., J. Emerson, J. Stapp, L. Stapp, P. Abe, and J. L. Burns. 2003. Use of real-time PCR with multiple targets to identify Pseudomonas aeruginosa and other nonfermenting gram-negative bacilli from patients with cystic fibrosis. J. Clin. Microbiol. 41:4312-4317.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 4312-4317
    • Qin, X.1    Emerson, J.2    Stapp, J.3    Stapp, L.4    Abe, P.5    Burns, J.L.6
  • 29
    • 0037236479 scopus 로고    scopus 로고
    • Evaluation of MicroScan Autoscan for identification of Pseudomonas aeruginosa isolates from cystic fibrosis patients
    • Saiman, L., J. L. Burns, D. Larone, Y. Chen, E. Garber, and S. Whittier. 2003. Evaluation of MicroScan Autoscan for identification of Pseudomonas aeruginosa isolates from cystic fibrosis patients. J. Clin. Microbiol. 41:492-494.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 492-494
    • Saiman, L.1    Burns, J.L.2    Larone, D.3    Chen, Y.4    Garber, E.5    Whittier, S.6
  • 31
    • 0033903547 scopus 로고    scopus 로고
    • Utility of commercial test systems for identification of Burkholderia cepacia complex from cystic fibrosis sputum culture
    • Shelly, D. B., T. Spilker, E. Gracely, T. Coenye, P. Vandamme, and J. J. LiPuma. 2000. Utility of commercial test systems for identification of Burkholderia cepacia complex from cystic fibrosis sputum culture. J. Clin. Microbiol. 38:3112-3115.
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 3112-3115
    • Shelly, D.B.1    Spilker, T.2    Gracely, E.3    Coenye, T.4    Vandamme, P.5    LiPuma, J.J.6
  • 32
    • 0033826467 scopus 로고    scopus 로고
    • Rapid identification of Pseudomonas aeruginosa from ocular isolates by PCR using exotoxin A-specific primers
    • Song, K. P., T. K. Chan, Z. L. Ji, and S. W. Wong. 2000. Rapid identification of Pseudomonas aeruginosa from ocular isolates by PCR using exotoxin A-specific primers. Mol. Cell. Probes 14:199-204.
    • (2000) Mol. Cell. Probes , vol.14 , pp. 199-204
    • Song, K.P.1    Chan, T.K.2    Ji, Z.L.3    Wong, S.W.4
  • 34
    • 0031813913 scopus 로고    scopus 로고
    • A highly selective PCR protocol for detecting 16S rRNA genes of the genus Pseudomonas (sensu stricto) in environmental samples
    • Widmer, F., R. J. Seidler, P. M. Gillevet, L. S. Watrud, and G. D. Di Giovanni. 1998. A highly selective PCR protocol for detecting 16S rRNA genes of the genus Pseudomonas (sensu stricto) in environmental samples. Appl. Environ. Microbiol. 64:2545-2553.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 2545-2553
    • Widmer, F.1    Seidler, R.J.2    Gillevet, P.M.3    Watrud, L.S.4    Di Giovanni, G.D.5
  • 35
    • 0023184331 scopus 로고
    • Bacterial evolution
    • Woese, C. R. 1987. Bacterial evolution. Microbiol. Rev. 51:221-271.
    • (1987) Microbiol. Rev. , vol.51 , pp. 221-271
    • Woese, C.R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.