Applying GIFT, a gene interactions finder in text, to fly literature

Bioinformatics

Volumn 21, Issue 17, 2005, Pages 3582-3583

  Domedel Puig, Núria ^a   Wernisch, Lorenz ^a  

^a UNIVERSITY OF LONDON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

DROSOPHILA PROTEIN;

ACCURACY; ARTICLE; COMPUTER NETWORK; COMPUTER PROGRAM; CONTROLLED STUDY; DROSOPHILA; GENE INTERACTION; INFORMATION PROCESSING; INTERMETHOD COMPARISON; NONHUMAN; PRIORITY JOURNAL; RECALL; RELIABILITY; SCIENTIFIC LITERATURE;

EID: 24144445414     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti578     Document Type: Article

References (9)

1. BioCreAtIvE (2004) Critical assessment of information extraction systems in biology. EMBO Workshop, Granada, Spain, 28-31 March 2004.
2. Blaschke,C., Andrade,M.A., Ouzounis,C. and Valencia,A. (1999) Automatic extraction of biological information from scientific text: protein-protein interactions. In Proceedings of the 7th International Conference on Intelligent Systems for Molecular Biology (ISMB 1999), Heidelberg, Germany, pp. 60-67.
3. Brody,T. (1999) The Interactive Fly: Gene networks, development and the Internet. Trends Genet., 15, 333-334.
4. Christ,O. (1994) A modular and flexible architecture for an integrated corpus query system. In Proceedings of 3rd Conference on Computational Lexicography and Text Research (COMPLEX'94), Budapest, Hungary, pp. 23-32.
5. Davidson,E.H. et al. (2002) A genomic regulatory network for development. Science, 295, 1669-1678.
6. Pournara,I. and Wernisch,L. (2004) Reconstruction of gene networks using Bayesian learning and manipulation experiments. Bioinformatics, 20, 2934-2942.
7. Proux,D., Rechenmann,F. and Julliard,L. (2000) A pragmatic information extraction strategy for gathering data on genetic interactions. In Proceedings of the 8th International Conference on Intelligence Systems for Molecular Biology, (ISMB 2000) La Jolla, San Diego, CA, pp. 279-285.
8. Schmid,H. (1994) Probabilistic part-of-speech tagging using decision trees. In Proceedings of the International Conference on New Methods in Language Processing, Manchester, UK, pp. 44-49.
9. The FlyBase Consortium (2003) The FlyBase database of the Drosophila genome projects and community literature. Nucleic Acids Res., 31, 172-175.