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Volumn 153, Issue 2-3, 2005, Pages 247-259

Short tandem repeat (STR) genotyping of keratinised hair Part 2. An optimised genomic DNA extraction procedure reveals donor dependence of STR profiles

Author keywords

Extraction; Hair; Low copy number (LCN); Shaft; Short tandem repeat (STR); Telogen

Indexed keywords

ARTICLE; COMPARATIVE STUDY; DNA EXTRACTION; DNA FINGERPRINTING; DONOR; FEASIBILITY STUDY; GENE AMPLIFICATION; GENE FREQUENCY; GENOTYPE; HAIR; HAIR ANALYSIS; HAIR GROWTH; HETEROZYGOSITY; HUMAN; KERATINIZATION; POLYMORPHIC LOCUS; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; REAL TIME POLYMERASE CHAIN REACTION; SHORT TANDEM REPEAT;

EID: 24044545493     PISSN: 03790738     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.forsciint.2005.05.005     Document Type: Article
Times cited : (54)

References (62)
  • 1
    • 0022344309 scopus 로고
    • Forensic applications of DNA 'fingerprints'
    • P. Gill, A.J. Jeffreys, and D.J. Werrett Forensic applications of DNA 'fingerprints' Nature 318 1985 577 579
    • (1985) Nature , vol.318 , pp. 577-579
    • Gill, P.1    Jeffreys, A.J.2    Werrett, D.J.3
  • 3
    • 4043152170 scopus 로고    scopus 로고
    • Physiology and growth of human hair
    • J. Robertson Taylor & Francis London
    • H. Harding, and G. Rogers Physiology and growth of human hair J. Robertson Forensic examination of human hair 1999 Taylor & Francis London 1 77
    • (1999) Forensic Examination of Human Hair , pp. 1-77
    • Harding, H.1    Rogers, G.2
  • 4
    • 0034961165 scopus 로고    scopus 로고
    • Human hair histogenesis for the mitochondrial DNA forensic scientist
    • C.A. Linch, D.A. Whiting, and M.M. Holland Human hair histogenesis for the mitochondrial DNA forensic scientist J. Forensic Sci. 46 4 2001 844 853
    • (2001) J. Forensic Sci. , vol.46 , Issue.4 , pp. 844-853
    • Linch, C.A.1    Whiting, D.A.2    Holland, M.M.3
  • 5
    • 0005345168 scopus 로고
    • DNA typing on single hair - Recent possibilities based on new extraction method
    • W. Baer A. Fiori U. Rossi Springer-Verlag Berlin
    • M. Pizzamiglio, A. Virgili, G. Vespi, G. D'Errico, C. Vecchio, and L. Garofano DNA typing on single hair - recent possibilities based on new extraction method W. Baer A. Fiori U. Rossi Advances in forensic haemogenetics 1994 Springer-Verlag Berlin 333 335
    • (1994) Advances in Forensic Haemogenetics , pp. 333-335
    • Pizzamiglio, M.1    Virgili, A.2    Vespi, G.3    D'Errico, G.4    Vecchio, C.5    Garofano, L.6
  • 6
    • 0026740191 scopus 로고
    • Deoxyribonucleic acid (DNA) typing of human leukocyte antigen (HLA)-DQA1 from single hairs in Japanese
    • R. Uchihi, K. Tamaki, T. Kojima, T. Yamamoto, and Y. Katsumata Deoxyribonucleic acid (DNA) typing of human leukocyte antigen (HLA)-DQA1 from single hairs in Japanese J. Forensic Sci. 37 3 1992 853 859
    • (1992) J. Forensic Sci. , vol.37 , Issue.3 , pp. 853-859
    • Uchihi, R.1    Tamaki, K.2    Kojima, T.3    Yamamoto, T.4    Katsumata, Y.5
  • 7
    • 0002306108 scopus 로고    scopus 로고
    • Purification of nuclear DNA from single hair shafts for DNA analysis in forensic sciences
    • H. Nozawa, T. Yamamoto, R. Uchihi, T. Yoshimoto, K. Tamaki, and S. Hayashi Purification of nuclear DNA from single hair shafts for DNA analysis in forensic sciences Leg. Med. 1 1999 61 67
    • (1999) Leg. Med. , vol.1 , pp. 61-67
    • Nozawa, H.1    Yamamoto, T.2    Uchihi, R.3    Yoshimoto, T.4    Tamaki, K.5    Hayashi, S.6
  • 11
    • 0043282586 scopus 로고    scopus 로고
    • The development of reduced size STR amplicons as tools for analysis of degraded DNA
    • J.M. Butler, Y. Shen, and B.R. McCord The development of reduced size STR amplicons as tools for analysis of degraded DNA J. Forensic Sci. 48 5 2003 1054 1064
    • (2003) J. Forensic Sci. , vol.48 , Issue.5 , pp. 1054-1064
    • Butler, J.M.1    Shen, Y.2    McCord, B.R.3
  • 12
    • 0038463640 scopus 로고    scopus 로고
    • New sensitive amplification primers for the STR locus D2S1338 for degraded casework DNA
    • P. Grubwieser, R. Mühlmann, and W. Parson New sensitive amplification primers for the STR locus D2S1338 for degraded casework DNA Int. J. Leg. Med. 117 3 2003 185 188
    • (2003) Int. J. Leg. Med. , vol.117 , Issue.3 , pp. 185-188
    • Grubwieser, P.1    Mühlmann, R.2    Parson, W.3
  • 13
    • 0035134022 scopus 로고    scopus 로고
    • Controls of hair follicle cycling
    • K.S. Stenn, and R. Paus Controls of hair follicle cycling Physiol. Rev. 81 1 2001 449 494
    • (2001) Physiol. Rev. , vol.81 , Issue.1 , pp. 449-494
    • Stenn, K.S.1    Paus, R.2
  • 14
    • 0025259663 scopus 로고
    • Improvement of PCR amplified DNA sequencing with the aid of detergents
    • B. Bachmann, W. Luke, and G. Hunsmann Improvement of PCR amplified DNA sequencing with the aid of detergents Nucleic Acids Res. 18 5 1990 1309
    • (1990) Nucleic Acids Res. , vol.18 , Issue.5 , pp. 1309
    • Bachmann, B.1    Luke, W.2    Hunsmann, G.3
  • 15
    • 0026580752 scopus 로고
    • The effects of plant polysaccharides and buffer additives on PCR
    • T. Demeke, and R.P. Adams The effects of plant polysaccharides and buffer additives on PCR BioTechniques 12 3 1992 332 334
    • (1992) BioTechniques , vol.12 , Issue.3 , pp. 332-334
    • Demeke, T.1    Adams, R.P.2
  • 16
    • 0029752741 scopus 로고    scopus 로고
    • Strategy for controlling preferential amplification and avoiding false negatives in PCR typing
    • T. Weissensteiner, and J.S. Lanchbury Strategy for controlling preferential amplification and avoiding false negatives in PCR typing BioTechniques 21 6 1996 1102 1108
    • (1996) BioTechniques , vol.21 , Issue.6 , pp. 1102-1108
    • Weissensteiner, T.1    Lanchbury, J.S.2
  • 17
    • 0030883816 scopus 로고    scopus 로고
    • Betaine improves the PCR amplification of GC-rich DNA sequences
    • W. Henke, K. Herdel, K. Jung, D. Schnorr, and S.A. Loening Betaine improves the PCR amplification of GC-rich DNA sequences Nucleic Acids Res. 25 19 1997 3957 3958
    • (1997) Nucleic Acids Res. , vol.25 , Issue.19 , pp. 3957-3958
    • Henke, W.1    Herdel, K.2    Jung, K.3    Schnorr, D.4    Loening, S.A.5
  • 19
    • 0027444866 scopus 로고
    • Water-soluble eumelanin as a PCR-inhibitor and a simple method for its removal
    • T. Yoshii, K. Tamura, T. Taniguchi, K. Akiyama, and I. Ishiyama Water-soluble eumelanin as a PCR-inhibitor and a simple method for its removal Jpn. J. Leg. Med. 47 4 1993 323 329
    • (1993) Jpn. J. Leg. Med. , vol.47 , Issue.4 , pp. 323-329
    • Yoshii, T.1    Tamura, K.2    Taniguchi, T.3    Akiyama, K.4    Ishiyama, I.5
  • 20
    • 0031688927 scopus 로고    scopus 로고
    • Bovine serum albumin reverses inhibition of RT-PCR by melanin
    • T.A. Giambernardi, U. Rodeck, and R.J. Klebe Bovine serum albumin reverses inhibition of RT-PCR by melanin BioTechniques 25 4 1998 564 566
    • (1998) BioTechniques , vol.25 , Issue.4 , pp. 564-566
    • Giambernardi, T.A.1    Rodeck, U.2    Klebe, R.J.3
  • 21
    • 0015886839 scopus 로고
    • Biochemical variation of hair keratins in man and non-human primates
    • D. Hrdy, and H.P. Baden Biochemical variation of hair keratins in man and non-human primates Am. J. Phys. Anthropol. 39 1973 19 24
    • (1973) Am. J. Phys. Anthropol. , vol.39 , pp. 19-24
    • Hrdy, D.1    Baden, H.P.2
  • 26
    • 0034961165 scopus 로고    scopus 로고
    • Human hair histogenesis for the mitochondrial DNA forensic scientist
    • C.A. Linch, D.A. Whiting, and M.M. Holland Human hair histogenesis for the mitochondrial DNA forensic scientist J. Forensic Sci. 46 4 2001 844 853
    • (2001) J. Forensic Sci. , vol.46 , Issue.4 , pp. 844-853
    • Linch, C.A.1    Whiting, D.A.2    Holland, M.M.3
  • 27
    • 33645474919 scopus 로고
    • Proliferative cycle and fate of cell nuclei in wool follicles
    • A.M. Downes, R.E. Chapman, A.R. Till, and P.A. Wilson Proliferative cycle and fate of cell nuclei in wool follicles Nature 212 1966 477 479
    • (1966) Nature , vol.212 , pp. 477-479
    • Downes, A.M.1    Chapman, R.E.2    Till, A.R.3    Wilson, P.A.4
  • 28
    • 0018830636 scopus 로고
    • Glucocorticoid-induced thymocyte apoptosis is associated with endogenous endonuclease activation
    • A.H. Wyllie Glucocorticoid-induced thymocyte apoptosis is associated with endogenous endonuclease activation Nature 284 1980 555 556
    • (1980) Nature , vol.284 , pp. 555-556
    • Wyllie, A.H.1
  • 29
    • 0031917005 scopus 로고    scopus 로고
    • Evaluation of the human hair root for DNA typing subsequent to microscopic comparison
    • C.A. Linch, S.L. Smith, and J.A. Prahlow Evaluation of the human hair root for DNA typing subsequent to microscopic comparison J. Forensic Sci. 43 2 1998 305 314
    • (1998) J. Forensic Sci. , vol.43 , Issue.2 , pp. 305-314
    • Linch, C.A.1    Smith, S.L.2    Prahlow, J.A.3
  • 30
    • 14744300145 scopus 로고    scopus 로고
    • The top 10 list: Criteria of authenticity for DNA from ancient and forensic samples
    • H.N. Poinar The top 10 list: criteria of authenticity for DNA from ancient and forensic samples Prog. Forensic Genet. 9 2003 575 579
    • (2003) Prog. Forensic Genet. , vol.9 , pp. 575-579
    • Poinar, H.N.1
  • 31
    • 0023834922 scopus 로고
    • The extraction of high-molecular-mass DNA from hair shafts
    • A. Schreiber, E. Amtmann, V. Storch, and G. Sauer The extraction of high-molecular-mass DNA from hair shafts FEBS Lett. 230 1,2 1988 209 211
    • (1988) FEBS Lett. , vol.230 , Issue.1-2 , pp. 209-211
    • Schreiber, A.1    Amtmann, E.2    Storch, V.3    Sauer, G.4
  • 34
    • 0002306108 scopus 로고    scopus 로고
    • Purification of nuclear DNA from single hair shafts for DNA analysis in forensic sciences
    • H. Nozawa, T. Yamamoto, R. Uchihi, T. Yoshimoto, K. Tamaki, and S. Hayashi Purification of nuclear DNA from single hair shafts for DNA analysis in forensic sciences Leg. Med. 1 1999 61 67
    • (1999) Leg. Med. , vol.1 , pp. 61-67
    • Nozawa, H.1    Yamamoto, T.2    Uchihi, R.3    Yoshimoto, T.4    Tamaki, K.5    Hayashi, S.6
  • 35
    • 0038124449 scopus 로고    scopus 로고
    • Mitochondrial DNA heteroplasmy or artefacts - A matter of the amplification strategy?
    • A. Brandstätter, and W. Parson Mitochondrial DNA heteroplasmy or artefacts - a matter of the amplification strategy? Int. J. Leg. Med. 117 3 2003 180 184
    • (2003) Int. J. Leg. Med. , vol.117 , Issue.3 , pp. 180-184
    • Brandstätter, A.1    Parson, W.2
  • 36
  • 39
    • 0037362732 scopus 로고    scopus 로고
    • Standard CYP2D6 genotyping procedures fail for the CYP2D6*5 and duplication alleles when hair roots are used as a source of DNA
    • S.H. Gan, R. Ismail, W.A. Wan Adnan, and Z. Wan Standard CYP2D6 genotyping procedures fail for the CYP2D6*5 and duplication alleles when hair roots are used as a source of DNA Clin. Chim. Acta 329 1-2 2003 61 68
    • (2003) Clin. Chim. Acta , vol.329 , Issue.1-2 , pp. 61-68
    • Gan, S.H.1    Ismail, R.2    Wan Adnan, W.A.3    Wan, Z.4
  • 40
    • 0034710344 scopus 로고    scopus 로고
    • An investigation of the rigor of interpretation rules for STRs derived from less than 100 pg of DNA
    • P. Gill, J. Whitaker, C. Flaxman, N. Brown, and J. Buckleton An investigation of the rigor of interpretation rules for STRs derived from less than 100 pg of DNA Forensic Sci. Int. 112 2000 17 40
    • (2000) Forensic Sci. Int. , vol.112 , pp. 17-40
    • Gill, P.1    Whitaker, J.2    Flaxman, C.3    Brown, N.4    Buckleton, J.5
  • 41
    • 0030954468 scopus 로고    scopus 로고
    • DNA fingerprints from fingerprints
    • R.A.H. van Oorschot, and M.K. Jones DNA fingerprints from fingerprints Nature 387 1997 767
    • (1997) Nature , vol.387 , pp. 767
    • Van Oorschot, R.A.H.1    Jones, M.K.2
  • 42
    • 0030764724 scopus 로고    scopus 로고
    • DNA typing of epithelial cells after strangulation
    • P. Wiegand, and M. Kleiber DNA typing of epithelial cells after strangulation Int. J. Leg. Med. 110 4 1997 181 183
    • (1997) Int. J. Leg. Med. , vol.110 , Issue.4 , pp. 181-183
    • Wiegand, P.1    Kleiber, M.2
  • 45
    • 0037057127 scopus 로고    scopus 로고
    • The propensity of individuals to deposit DNA and secondary transfer of low level DNA from individuals to inert surfaces
    • A. Lowe, C. Murray, J. Whitaker, G. Tully, and P. Gill The propensity of individuals to deposit DNA and secondary transfer of low level DNA from individuals to inert surfaces Forensic Sci. Int. 129 2002 25 34
    • (2002) Forensic Sci. Int. , vol.129 , pp. 25-34
    • Lowe, A.1    Murray, C.2    Whitaker, J.3    Tully, G.4    Gill, P.5
  • 46
    • 0001243585 scopus 로고
    • Recoating of human hair by sebum
    • H. Eberhardt Recoating of human hair by sebum J. Soc. Cosmet. Chem. 27 1976 235 239
    • (1976) J. Soc. Cosmet. Chem. , vol.27 , pp. 235-239
    • Eberhardt, H.1
  • 47
    • 0018946277 scopus 로고
    • Studies on the quality and chemical composition of surface lipids of human scalp and hair
    • K. Okamoto Studies on the quality and chemical composition of surface lipids of human scalp and hair J. Dermatol. 7 1980 85 99
    • (1980) J. Dermatol. , vol.7 , pp. 85-99
    • Okamoto, K.1
  • 48
    • 0038711020 scopus 로고    scopus 로고
    • Characterization of surface organic components of human hair by on-line supercritical fluid extraction-gas chromatography/mass spectrometry: A feasibility study and comparison with human identification using mitochondrial DNA sequences
    • B.A. Benner, J.V. Goodpaster, J.A. DeGrasse, L.A. Tully, and B.C. Levin Characterization of surface organic components of human hair by on-line supercritical fluid extraction-gas chromatography/mass spectrometry: a feasibility study and comparison with human identification using mitochondrial DNA sequences J. Forensic Sci. 48 3 2003 554 563
    • (2003) J. Forensic Sci. , vol.48 , Issue.3 , pp. 554-563
    • Benner, B.A.1    Goodpaster, J.V.2    Degrasse, J.A.3    Tully, L.A.4    Levin, B.C.5
  • 49
    • 0025923821 scopus 로고
    • ® 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material
    • ® 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material BioTechniques 10 4 1991 506 513
    • (1991) BioTechniques , vol.10 , Issue.4 , pp. 506-513
    • Walsh, P.S.1    Metzger, D.A.2    Higuchi, R.3
  • 53
    • 0023678775 scopus 로고
    • The enzymatic activity of proteinase K is controlled by calcium
    • J. Bajorath, W. Hinrichs, and W. Saenger The enzymatic activity of proteinase K is controlled by calcium Eur. J. Biochem. 176 1988 441 447
    • (1988) Eur. J. Biochem. , vol.176 , pp. 441-447
    • Bajorath, J.1    Hinrichs, W.2    Saenger, W.3
  • 54
    • 0024191755 scopus 로고
    • Three-dimensional structure of proteinase K at 0.15-nm resolution
    • C. Betzel, G.P. Pal, and W. Saenger Three-dimensional structure of proteinase K at 0.15-nm resolution Eur. J. Biochem. 178 1988 155 171
    • (1988) Eur. J. Biochem. , vol.178 , pp. 155-171
    • Betzel, C.1    Pal, G.P.2    Saenger, W.3
  • 55
    • 0024959484 scopus 로고
    • Long-range structural changes in proteinase K triggered by calcium ion removal
    • J. Bajorath, S. Raghunathan, W. Hinrichs, and W. Saenger Long-range structural changes in proteinase K triggered by calcium ion removal Nature 337 1989 481 484
    • (1989) Nature , vol.337 , pp. 481-484
    • Bajorath, J.1    Raghunathan, S.2    Hinrichs, W.3    Saenger, W.4
  • 56
    • 0027096773 scopus 로고
    • Methanol for preparing hair bulbs for PCR
    • C.-Y. Han, B.K. Lin, and H.J. Lin Methanol for preparing hair bulbs for PCR Nucleic Acids Res. 20 23 1992 6419 6420
    • (1992) Nucleic Acids Res. , vol.20 , Issue.23 , pp. 6419-6420
    • Han, C.-Y.1    Lin, B.K.2    Lin, H.J.3
  • 58
    • 0028943853 scopus 로고
    • Short tandem repeat typing of bodies from a mass disaster: High success rate and characteristic amplification patterns in highly degraded samples
    • J.P. Whitaker, T.M. Clayton, A.J. Urquhart, E.S. Millican, T.J. Downes, and C.P. Kimpton Short tandem repeat typing of bodies from a mass disaster: high success rate and characteristic amplification patterns in highly degraded samples BioTechniques 18 4 1995 670 677
    • (1995) BioTechniques , vol.18 , Issue.4 , pp. 670-677
    • Whitaker, J.P.1    Clayton, T.M.2    Urquhart, A.J.3    Millican, E.S.4    Downes, T.J.5    Kimpton, C.P.6
  • 59
    • 0030462847 scopus 로고    scopus 로고
    • The validation of a 7-locus multiplex STR test for use in forensic case work. I. Mixtures, ageing degradation and species studies
    • R. Sparkes, C. Kimpton, S. Watson, N. Oldroyd, T. Clayton, and L. Barnett The validation of a 7-locus multiplex STR test for use in forensic case work. I. Mixtures, ageing degradation and species studies Int. J. Legal Med. 109 1996 186 194
    • (1996) Int. J. Legal Med. , vol.109 , pp. 186-194
    • Sparkes, R.1    Kimpton, C.2    Watson, S.3    Oldroyd, N.4    Clayton, T.5    Barnett, L.6
  • 60
    • 0032737671 scopus 로고    scopus 로고
    • Extraction of DNA from decomposed human tissue: An evaluation of five extraction methods for short tandem repeat typing
    • P. Hoff-Olsen, B. Mevåg, E. Staalstrøm, B. Hovde, T. Egeland, and B. Olaisen Extraction of DNA from decomposed human tissue: an evaluation of five extraction methods for short tandem repeat typing Forensic Sci. Int. 105 1999 171 183
    • (1999) Forensic Sci. Int. , vol.105 , pp. 171-183
    • Hoff-Olsen, P.1    Mevåg, B.2    Staalstrøm, E.3    Hovde, B.4    Egeland, T.5    Olaisen, B.6
  • 61
    • 0032711680 scopus 로고    scopus 로고
    • An evaluation of techniques for the extraction and amplification of DNA from naturally shed hairs
    • L. Vigilant An evaluation of techniques for the extraction and amplification of DNA from naturally shed hairs Biol. Chem. 380 1999 1329 1331
    • (1999) Biol. Chem. , vol.380 , pp. 1329-1331
    • Vigilant, L.1
  • 62
    • 0035113040 scopus 로고    scopus 로고
    • A silica-based mitochondrial DNA extraction method applied to forensic hair shafts and teeth
    • L.E. Baker, W.F. McCormick, and K.J. Matteson A silica-based mitochondrial DNA extraction method applied to forensic hair shafts and teeth J. Forensic Sci. 46 1 2001 126 130
    • (2001) J. Forensic Sci. , vol.46 , Issue.1 , pp. 126-130
    • Baker, L.E.1    McCormick, W.F.2    Matteson, K.J.3


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