Identification of reaction networks for bioprocesses: Determination of a partially unknown pseudo-stoichiometric matrix

Bioprocess and Biosystems Engineering

Volumn 27, Issue 5, 2005, Pages 293-301

  Bernard, Olivier ^a   Bastin, Georges ^b  

^a INRIA   (France)

^b Bâtiment Euler   (Belgium)

Author keywords

Bioreactors; Modelling; Nonlinear systems; Validation

Indexed keywords

BIOREACTORS; COMPUTER SIMULATION; MASS TRANSFER; MATHEMATICAL MODELS; NONLINEAR SYSTEMS; STOICHIOMETRY;

LIPASE PRODUCTION; MODELLING; OLIVE OIL; VALIDATION;

CHEMICAL REACTIONS;

TRIACYLGLYCEROL LIPASE;

ARTICLE; BIOPROCESS; BIOREACTOR; CANDIDA RUGOSA; ENZYME SYNTHESIS; MATHEMATICAL COMPUTING; METHODOLOGY; MODEL; PRIORITY JOURNAL; SIMULATION; STOICHIOMETRY;

ALGORITHMS; BIOPOLYMERS; BIOREACTORS; CANDIDA; CELL CULTURE TECHNIQUES; COMPUTER SIMULATION; GENE EXPRESSION REGULATION; KINETICS; LIPASE; METABOLIC CLEARANCE RATE; MODELS, BIOLOGICAL; MODELS, CHEMICAL; NUMERICAL ANALYSIS, COMPUTER-ASSISTED; PLANT OILS; SIGNAL TRANSDUCTION; SYSTEMS BIOLOGY;

CANDIDA RUGOSA; ZEROS;

EID: 23944522281     PISSN: 16157591     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00449-005-0407-3     Document Type: Article

References (12)

1. Bastin G, Dochain D (1990) On-line estimation and adaptive control of bioreactors. Elsevier, Amsterdam
2. Bastin G, Vanlmpe JF (1995) Nonlinear and adaptive control in biotechnology: a tutorial. Eur. J. Control 1(1):1-37
3. Bernard O, Bastin G (1998) Structural identification of non-linear mathematical models for bioprocesses. In: Proceedings of the Nonlinear Control Systems Symposium, Enschede, pp 449-454
4. Bernard O, Bastin G (2005) On the estimation of the pseudostoichiometric matrix for mass balance modeling of biotechnological processes. Math Biosci 193:51-77
5. Bogaerts P, Vande Wouwer A (2001) Sytematic generation of identifiable macroscopic reaction schemes. In: Proceedings of the 8th IFAC Conference on Computer Applications in Biotechnology (CAB8), Montréal
6. Chen L, Bastin G (1996) Structural identifiability of the yield coefficients in bioprocess models when the reaction rates are unknown. Math Biosci 132:35-67
7. Chevalier T, Schreiber I, Ross J (1993) Toward a systematic determination of complex reaction mechanisms. J Phys Chem 97:6776-6787
8. Delbès C, Moletta R, Godon J-J (2001) Bacterial and archaeal 16s rdna and 16s rrna dynamics during an acetate crisis in an anaerobic digestor ecosystem. FEMS Microbiol Ecol 35:19-26
9. Eiswirth M, Freund A, Ross J (1991) Mechanistic classification of chemical oscillators and the role of species. In: Advances in Chemical Physics. Wiley, New-York, vol 80, ch. 1 pp 127-199
10. Horn RA, Johnson CR (1993) Matrix analysis. Cambridge University Press, Cambridge
11. Johnson RA, Wichern DW (1992) Applied multivariate statistical analysis. Prentice Hall, Englewood cliffs
12. Serra P, del Rio JL, Robusté J, Poch M, Sola C, Cheruy A (1992) A model for lipase production by Candida rugosa. Bioprocess Eng 8:145-150