Spectroscopic studies of photosystem II in chlorophyll d-containing Acaryochloris marina

Biochemistry

Volumn 44, Issue 33, 2005, Pages 11178-11187

  Razeghifard, M Reza ^a   Chen, Min ^a   Hughes, Joseph L ^b   Freeman, Joel ^a   Krausz, Elmars ^b   Wydrzynski, Tom ^a  

^a AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

^b AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ABSORPTION SPECTROSCOPY; ELECTRON SPIN RESONANCE SPECTROSCOPY; ELECTRON TRANSITIONS; FLUORESCENCE; OXIDATION; PROTEINS; SIGNAL TO NOISE RATIO;

CYANOBACTERIA; ELECTRON TRANSFER (ET); OPTICAL SPECTROSCOPY; SPECTRAL RESOLUTION;

CHLOROPHYLL;

CHLOROPHYLL; CHLOROPHYLL A; CHLOROPHYLL D; OXYGEN; PHEOPHYTIN; PHEOPHYTIN A; PLASTOQUINONE; TYROSINE; UNCLASSIFIED DRUG;

ABSORPTION SPECTROSCOPY; ACARYOCHLORIS MARINA; ARTICLE; BACTERIAL GROWTH; CHEMICAL REACTION KINETICS; CYANOBACTERIUM; ELECTRON SPIN RESONANCE; ELECTRON TRANSPORT; FLUORESCENCE; HIGHER PLANT; LOW TEMPERATURE; NONHUMAN; OXIDATION; PHOTOSYSTEM II; PRIORITY JOURNAL; PROTEIN INTERACTION; REACTION ANALYSIS; REDUCTION; ROOM TEMPERATURE; SIGNAL NOISE RATIO; SPECTRAL SENSITIVITY;

BACTERIAL PROTEINS; CHLOROPHYLL; CYANOBACTERIA; ELECTRON SPIN RESONANCE SPECTROSCOPY; ELECTRON TRANSPORT; OXIDATION-REDUCTION; OXYGEN; PHEOPHYTINS; PHOTOSYSTEM II PROTEIN COMPLEX; PLASTOQUINONE; SPECTROMETRY, FLUORESCENCE;

ACARYOCHLORIS MARINA; CYANOBACTERIA; CYANOBACTERIUM (GENUS); EMBRYOPHYTA;

EID: 23944486368     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi048314c     Document Type: Article

References (56)

1. Deisenhofer, J., Epp, O., Miki, K., Huber, R., and Michel, H. (1985) Structure of the protein subunits in the photosynthetic reaction center of Rhodopseudomonas viridis at 3 Å resolution, Nature 318, 618-624.
2. Miyashita, H., Ikemoto, H., Kurano, N., Adachi, K., Chihara, M., and Miyachi, S. (1996) Chlorophyll d as a major pigment, Nature 383, 402.
3. Blankenship, R. E., and Hartman, H. (1998) The origin and evolution of oxygenic photosynthesis, Trends Biochem. Sci. 23, 94-97.
4. Miyachita, H., Ikemoto, H., Kurano, N., and Miyachi, S. (2003) Acaryochloris marina Gen. et. sp. nov. (cyanobacteria), an oxygenic photosynthetic prokaryote containing chl d as a major pigment, J. Phycol. 39, 1247-1253.
5. Mimuro, M., Akimoto, S., Gotoh, T., Yokono, M., Akiyama, M., Tsuchiya, T., Miyashita, H., Kobayashi, M., and Yamazaki, I. (2003) Identification of the primary electron donor in PS II of the Chl d-dominated cyanobacterium Acaryochloris marina, FEBS Lett. 27933, 1-4.
6. Boichenko, V. A., Klimov, V. V., Miyashita, H., and Miyachi, S. (2000) Functional characteristics of chlorophyll d-predominating photosynthetic apparatus in intact cells of Acaryochloris marina, Photosynth. Res. 65, 269-277.
7. Hu, Q., Miyashita, H., Iwasaki, I., Kurano, N., Miyachi, S., Iwaki, M., and Itoh, S. (1998) A photosystem I reaction center driven by chlorophyll d in oxygenic photosynthesis, Proc. Natl. Acad. Sci. U.S.A. 95, 13319-13323.
8. Akiyama, M., Miyashita, H., Kise, H., Watanabe, T., Miyachi, S., and Kobayashi, M. (2001) Detection of chlorophyll d′ and pheophytin a in a chlorophyll d-dominating oxygenic photosynthetic prokaryote Acaryochloris marina, Anal. Sci. 17, 205-208.
9. Golbeck, J. H., and Bryant, D. A. (1991) Photosystem-I, Curr. Top. Bioenerg. 16, 83-177.
10. Brettel, K. (1997) Electron transfer and arrangement of the redox cofactors in photosystem I, Biochim. Biophys. Acta 1318, 322-373.
11. Mimuro, M., Akimoto, S., Yamazaki, I., Miyashita, H., and Miyachi, S. (1999) Fluorescence properties of chlorophyll d-dominating prokaryotic alga, Acaryochloris marina: Studies using time-resolved fluorescence spectroscopy on intact cells, Biochim. Biophys. Acta 1412, 37-46.
12. Itoh, S., Iwaki, M., Noguti, T., Kawamori, A., Mino, H., Hu, Q., Iwasaki, I., Miyashita, H., Kurano, K. N., Miyachi, S., and Shen, R. (2001) in Proceedings of the 12th International Congress on Photosynthesis, pp S6-S28.
13. Nieuwenburg, P., Clarke, R. J., Cai, Z. L., Chen, M., Larkum, A. W. D., Cabrai, N. M., Ghiggino, K. P., and Reimers, J. R. (2003) Examination of the photophysical processes of chlorophyll d leading to a clarification of proposed uphill energy transfer processes in cells of Acaryochloris marina, Photochem. Photobiol. 77, 628-637.
14. Kok, B., Forbush, B., and McGloin, M. (1970) Cooperation of charges in photosynthetic Ch evolution I. A linear four step mechanism, Photochem. Photobiol. 11, 457-475.
15. Joliot, P., Barbieri, G., and Chabaud, R. (1969) Un nouveau modele des centers photochimiques du systeme I1, Photochem. Photobiol. 10, 309-329.
16. + in photosystem II is tyrosine-161 of the D1 polypeptide, Biochemistry 27, 9071-9074.
17. 680, Biochemistry 28, 6960-6969.
18. Blankenship, R. E., Babcock, G. T., Warden, J. T., and Sauer, K. (1975) Observation of a new EPR transient in chloroplasts that may reflect the electron donor to photosystem 11 at room temperature, FEBS Lett. 51, 287-293.
19. vf, the physiological donor to Peso, Biochim. Biophys. Acta 423, 462-478.
20. Vermaas, W. F. J., Rutherford, A. W., and Hansson, Ö. (1988) Site-directed mutagenesis in photosystem II of the cyanobacterium Synechocystis sp. PCC 6803: Donor D is a tyrosine residue in the D2 protein, Proc. Natl. Acad. Sci. U.S.A. 85, 8477-8481.
21. Babcock, G. T., and Sauer, K. (1975) A rapid, light-induced transient in electron paramagnetic resonance signal II activated upon inhibition of photosynthetic oxygen evolution, Biochim. Biophys. Acta 376, 315-328.
22. . reduction kinetics in the absence of the manganese-stabilizing protein of photosystem II. Biochemistry 36, 14474-14478.
23. Razeghifard, M. R., and Pace, R. J. (1997) Electron paramagnetic resonance kinetics studies of the S states in spinach PSII membranes, Biochim. Biophys. Acta 1322, 141-150.
24. Razeghifard, M. R., and Pace, R. J. (1999) EPR kinetic studies of oxygen release in thylakoids and PSII membranes: A kinetic intermediate in the 83 to So transition, Biochemistry 38, 1252-1257.
25. Mulkidjanian, A. Y., Cherepanov, D. A., Haumann, M., and Junge, W. (1996) Photosystem II of green plants: Topology of core pigments and redox cofactors as inferred from electrochromic difference spectra, Biochemistry 35, 3093-3107.
26. van Gorkom, H. (1974) Identification of the reduced primary electron acceptor of photosystem II as a bound semiquinone anion, Biochim. Biophys. Acta 347, 439-442.
27. Butler, W. L. (1971) The photoproduction of C-550 in chloroplasts and its inhibition by lipase, Biochim. Biophys. Acta 245, 237-239.
28. Peterson Årsköld, S., Masters, V. M., Prince, B. J., Smith, P. J., Pace, R. J., and Krausz, E. (2003) Optical spectra of Synechocystis and spinach photosystem II preparations: Identification of the D1-pheophytin energies and stark shifts, J. Am. Chem. Soc. 125, 13063-13074.
29. Porra, R. J., Thompson, W. A., and Kriedemann, P. E. (1989) Determination of accurate extinction coefficients and simultaneous equations for assaying chlorophylls a and b extracted with four different solvents: Verification of the concentration of chlorophyll standards by atomic absorption spectroscopy, Biochim. Biophys. Acta 975, 384-394.
30. Chen, M., Quinnell, R. G., and Larkum, A. W. D. (2002) Chlorophyll d as the major photopigment in Acaryochloris marina, J. Porphyrins Phthalocyanines 6, 763-773.
31. Razeghifard, M. R., Kim, S., Patzlaff, J. S., Hutchison, R. S., Krick, T., Ayala, I., Steenhuis, J. J., Boesch, S. E., Wheeler, R. A., and Barry, B. A. (1999) In vivo, in vitro, and calculated vibrational spectra of plastoquinone and the plastosemiquinone anion radical, J. Phys. Chem. B 103, 9790-9800.
32. Smith, P. J., Peterson, S., Masters, V. M., Wydrzynski, T., Styring, S., Krausz, E., and Pace, R. J. (2002) Magneto-optical measurements of the pigments in fully active photosystem II core complexes from plants, Biochemistry 41, 1981-1989.
33. 9, Inorg. Chem. 35, 4218-4226.
34. Boska, M., Blough, N. V., and Sauer, K. (1985) The effect of mono- and divalent salts on the rise and decay kinetics of EPR signal 11 in photosystem II preparations from spinach, Biochim. Biophys. Acta 808, 132-139.
35. Babcock, G. T., Blankenship, R. E., and Sauer, K. (1976) Reaction kinetics for positive charge accumulation on the water side of chloroplast photosystem 11, FEBS Lett. 61, 286-289.
36. + decay kinetics in triswashed chloroplast photosystem II preparation as a function of pH, Biochim. Biophys. Acta 722, 327-330.
37. Debus, R. J. (1992) The manganese and calcium ions of photosynthetic oxygen evolution, Biochim. Biophys. Acta 1102, 269-352.
38. Razeghifard, M. R., Klughammer, C., and Pace, R. J. (1997) Electron paramagnetic resonance kinetic studies of the S states in spinach thylakoids, Biochemistry 36, 86-92.
39. Renger, G. (2001) Photosynthetic water oxidation to molecular oxygen: Apparatus and mechanism, Biochim. Biophys. Acta 1503, 210-228.
40. Cole, J., and Sauer, K. (1987) The flash number dependence of EPR signal II decay as a probe for charge accumulation in photosystem II, Biochim. Biophys. Acta 891, 40-48.
41. 2-evolving photosystem II preparations, Biochemistry 27, 5848-5855.
42. Lydakis-Simantiris, N., Hoganson, C. W., Ghanotakis, D. F., and Babcock, G. T. (1995) in Photosynthsis: From Light to Biosphere (Mathis, P., Ed.) pp 279-282, Kluwer Academic Publishers, Dordrecht, The Netherlands.
43. Diner, B. A., Schlodder, E., Nixon, P. J., Coleman, W. J., Rappaport, F., Lavergne, J., Vermass, W. F. J., and Chisholm, D. A. (2001) Site-directed mutations at D1-His 198 and D2-His197 of photosystem II in Synechocystis PCC 6803: Sites of primary charge separation and cation and triplet stabilization, Biochemistry 40, 9265-9281.
44. Diner, B. A. (1998) Application of spectroscopic techniques to the study of photosystem II mutations engineered in Synechocystis and Chlamydomonas, Methods Enzymol. 297, 337-360.
45. Renger, G., Eckert, H.-J., Bergmann, A., Bernarding, J., Liu, B., Napiwotzki, A., Reifarth, F., and Eichler, H. J. (1995) Fluorescence and spectroscopic studies of exciton trapping and electron transfer in photosytem II of higher plants, Aust. J. Plant Physiol 22, 167-181.
46. Barter, L. M. C., Bianchietti, M., Jeans, C., Schilstra, M. J., Hankamer, B., Diner, B. A., Barber, J., Durant, J. R., and Klug, D. R. (2001) Relationship between excitation energy transfer, trapping, and antenna size in photosystem II, Biochemistry 40, 4026-4034.
47. Cuni, A., Xiong, L., Sayre, R., Rappaport, F., and Lavergne, J. (2004) Modification of the pheophytin midpoint potential in photosystem II: Modulation of the quantum yield of charge separation and of charge recombination pathways, Phys. Chem. Chem. Phys. 6, 4825-4831.
48. Houssier, C., and Sauer, K. (1970) Circular dichroism and magnetic circular dichroism of the chlorophyll and protochlorophyll pigments, J. Am. Chem. Soc. 92, 779-791.
49. Katz, J. J., Shipman, L. L., Cotton, T. M., and Janson, T. R. (1978) in The Porphyrins, Physical Chemistry (Dolphin, D., Ed.) pp 401, Academic Press: New York.
50. Ivancich, A., Artz, K., Williams, J. C., Allen, J. P., and Mattioli, T. A. (1998) Effects of hydrogen bonds on the redox potential and electronic structure of the bacterial primary electron donor, Biochemistry 37, 11812-11820.
51. Lin, X., Murchison, H. A., Nagarajan, V., Parson, W. W., Allen, J. P., and Williams, J. C. (1994) Specific alteration of the oxidation potential of the electron donor in reaction centers from Rhodobacter sphaeroides, Proc. Natl. Acad. Sci. U.S.A. 91, 10265-10269.
52. Kálmán, L., LoBrutto, R., Allen, J. P., and Williams, J. C. (1999) Modified reaction centers oxidize tyrosine in reactions that mirror photosystem II, Nature 402, 696-699.
53. Mimuro, M., Hirayama, K., Uezono, K., Miyashita, H., and Miyachi, S. (2000) Uphill energy transfer in a chlorophyll d-dominating oxygenic photosynthetic prokaryote, Acaryochloris marina, Biochim. Biophys. Acta 1456, 27-34.
54. Hughes, J. L., Prince, B. J., Krausz, E., Smith, P. J., Pace, R. J., and Riesen, H. (2004) Highly efficient spectral hole-burning in oxygen-evolving photosystem II preparations, J. Phys. Chem. B 108, 10428-10439.
55. 680, Aust. J. Chem. 57, 1-5.
56. Keren, N., Kidd, M. J., Penner-Hahn, J. E., and Pakrasi, H. B. (2002) A light-dependent mechanism for massive accumulation of manganese in the photosynthetic bacterium Synechocystis sp. PCC 6803, Biochemistry 41, 15085-15092.