Nucleocapsid gene variability reveals two subgroups of Lettuce necrotic yellows virus: Brief report

Archives of Virology

Volumn 150, Issue 8, 2005, Pages 1661-1667

  Callaghan, B ^a   Dietzgen, R G ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUSTRALIA; CLASSIFICATION; GENETIC VARIABILITY; GENETICS; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT; RHABDOVIRUS; VIROLOGY; VIRUS NUCLEOCAPSID;

AUSTRALIA; MOLECULAR SEQUENCE DATA; NUCLEOCAPSID; PHYLOGENY; PLANTS; RHABDOVIRIDAE; VARIATION (GENETICS);

LACTUCA; LETTUCE NECROTIC YELLOWS VIRUS;

EID: 23944465475     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-005-0528-7     Document Type: Article

References (18)

1. Bilsel PA, Rowe JE, Fitch WM, Nichol ST (1990) Phosphoprotein and nucleocapsid protein evolution of vesicular stomatitis virus New Jersey. J Virol 64: 2498-2504
2. Dietzgen RG (1995) Rhabdoviridae. In: Singh RP, Singh US, Kohmoto K (eds) Pathogenesis and host specificity in plant diseases: Histopathological, biochemical, genetic and molecular bases, vol III, Viruses and viroids. Pergamon, Elsevier Science Ltd, Oxford UK, pp 177-197
3. Dietzgen RG, Hunter BG, Francki RIB, Jackson AO (1989) Cloning of lettuce necrotic yellows virus RNA and identification of virus-specific polyadenylated RNAs in infected Nicotiana glutinosa leaves. J Gen Virol 70: 2299-2307
4. Fang RX, Wang Q, Xu BY, Pang Z, Zhu HT, Mang KQ, Gao DM, Qin WS, Chua NH (1994) Structure of the nucleocapsid protein gene of rice yellow stunt rhabdovirus. Virology 204: 367-375
5. Felsenstein J (1993) (Phylogeny Inference package) version 3.572c. Department of Genetics, University of Washington, Seattle, USA
6. Francki RIB, Randles JW, Dietzgen RG (1989) Lettuce necrotic yellows virus. In: AAB Descriptions of plant viruses No. 343
7. GCG (1994) Program manual for the Wisconsin package, version 8. Genetics Computer Group, Madison, WI
8. Jackson AO, Goodin M, Moreno I, Johnson J, Lawrence DM (1999) Rhabdoviruses (Rhabdoviridae): Plant rhabdoviruses. In: Granoff A, Webster RG (eds) Encyclopedia of virology, vol 3. Academic Press, San Diego, pp 1531-1541
9. Kissi B, Tordo N, Bourhy H (1995) Genetic polymorphism in the rabies virus nucleoprotein gene. Virology 209: 526-537
10. Klerks MM, Lindner JL, Vaškova D, Špak J, Thompson JR, Jelkmann W, Schoen CD (2004) Detection and tentative grouping of Strawberry crinkle virus isolates. Eur J Plant Pathol 110: 45-52
11. Kouznetzoff A, Buckle M, Tordo N (1998) Identification of a region of the rabies virus N protein involved in direct binding to the viral RNA. J Gen Virol 79: 1005-1013
12. Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual, 3rd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
13. Tanno F, Nakatsu A, Toriyama S, Kojima M (2000) Complete nucleotide sequence of Northern cereal mosaic virus and its genome organization. Arch Virol 145: 1373-1384
14. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680
15. Tordo N, Benmansour A, Calisher C, Dietzgen RG, Fang R-X, Jackson AO, Kurath G, Nadin-Davies S, Tesh RB, Walker PJ (2004) Family Rhabdoviridae. In: Virus taxonomy, classification and nomenclature of viruses. Academic Press, San Diego
16. Wetzel T, Dietzgen RG, Dale JL (1994) Genomic organization of lettuce necrotic yellows rhabdovirus. Virology 200: 401-412
17. Wetzel T, Dietzgen RG, Geering ADW, Dale JL (1994) Analysis of the nucleocapsid gene of lettuce necrotic yellows rhabdovirus. Virology 202: 1054-1057
18. Zuidema D, Heaton LA, Jackson AO (1987) Structure of the nucleocapsid protein gene of sonchus yellow net virus. Virology 159: 373-380