Specific formation of beads-on-a-chain structures on giant DNA using a designed polyamine derivative

Journal of the American Chemical Society

Volumn 127, Issue 31, 2005, Pages 10910-10916

  Chen, Ning ^a,b   Zinchenko, Anatoly A ^b   Murata, Shizuaki ^a,c   Yoshikawa, Kenichi ^b,c  

^a NAGOYA UNIVERSITY   (Japan)

^b KYOTO UNIVERSITY   (Japan)

^c JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

DENATURATION; FLUORESCENT SPECTROSCOPY; INTRAMOLECULAR SEGREGATION; POLYAMINES;

AMINES; DERIVATIVES; FLUORESCENCE; MICROSCOPIC EXAMINATION; SEGREGATION (METALLOGRAPHY); TRANSMISSION ELECTRON MICROSCOPY; ULTRAVIOLET SPECTROSCOPY;

DNA;

2 AMINO 6,7 DIMETHYL 4 (4,9,13 TRIAZATRIDECYLAMINO)PTERIDINE; DNA; POLYAMINE; PTERIDINE DERIVATIVE; UNCLASSIFIED DRUG;

ARTICLE; CONFORMATIONAL TRANSITION; DNA DENATURATION; DNA STRUCTURE; FLUORESCENCE MICROSCOPY; TRANSMISSION ELECTRON MICROSCOPY; ULTRAVIOLET SPECTROSCOPY;

BACTERIOPHAGE T4; DNA, VIRAL; MICROSCOPY, FLUORESCENCE; NUCLEIC ACID DENATURATION; POLYAMINES; SPECTROPHOTOMETRY, ULTRAVIOLET;

EID: 23744484030     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja042509q     Document Type: Article

References (38)

1. Self-Assembling Complexes for Gene Delivery; Kabanov, A. V., Felgner, Ph. L., Seymour, L. W., Eds.; Wiley: Chichester, 1998.
2. Luo, D.; Saltzman, W. Nat. Biotechnol. 2000, 18, 33-37.
3. Frenkiel-Krispin, B.; Ben-Avraham, I.; Englander, J.; Shimoni, E.; Wolf, S. G.; Minsky, A. Mol. Microbiol. 2004, 51, 395-405.
4. Levin-Zaidman, S.; Englander, J.; Shimoni, E.; Sharma, A. K.; Minton, K. W.; Minsky, A. Science 2003, 299, 254.
5. Hud, N. V.; Allen, M. J.; Downing, K. H.; Lee, J.; Balhorn, R. Biochem. Biophys. Res. Commun. 1993, 1347-1354.
6. Bloomfield, V. A. Curr. Opin. Struct. Biol. 1996, 6, 334-341.
7. Iwaki, T.; Yoshikawa, K. Phys. Rev. E 2003, 68, 031902.
8. Lifshitz, I. M.; Grosberg, A. Y.; Khokhlov, A. R. Rev. Mod. Phys. 1978, 50, 683-713.
9. Vasilevskaya, V. V.; Khokhlov, A. R.; Matsuzawa, Y.; Yoshikawa, K. J. Chem. Phys. 1995, 102, 6595-6602.
10. Takagi, S.; Tsumoto, K.; Yoshikawa, K. J. Chem. Phys. 2001, 114, 6942-6949.
11. Ueda, M.; Yoshikawa, K. Phys. Rev. Lett. 1996, 77, 2133-2136.
12. Yoshikawa, K.; Yoshikawa, Y.; Koyama, Y.; Kanbe, T. J. Am. Chem. Soc. 1997, 119, 6473-6477.
13. Mohd-Sarip, A.; Verrijzer, C. P. Science 2004, 306, 1484-1485.
14. Gibbs, W. W. Sci. Am. 2003, 12, 80-85.
15. Gosule, L. C.; Schellman, J. A. Nature 1976, 259, 333-335.
16. Hud, N. V.; Downing, K. H.; Balhorn, R. Proc. Natl. Acad. Sci. U.S.A. 1995, 92, 3581-3585.
17. Sakaue, T. J. Chem. Phys. 2004, 120, 6299-6305.
18. Dobrynin, A. V.; Rubinstein, M.; Obukhov, S. P. Macromolecules 1996, 29, 2974-2979.
19. Chodanowski, P.; Stoll, S. J. Chem. Phys. 1999, 111, 6069-6081.
20. Lyulin, A. V.; Dunweg, B.; Borisov, O. V.; Darinskii, A. A. Macromolecules 1999, 32, 3264-3278.
21. Micka, U.; Kremer, K. Europhys. Lett. 2000, 49, 189-195.
22. Zinchenko, A. A.; Sergeyev, V. G.; Murata, S.; Yoshikawa, K. J. Am. Chem. Soc. 2003, 125, 4414-4415.
23. Starodoubtsev, S. G.; Yoshikawa, K. J. Phys. Chem. 1996, 100, 19702-19705.
24. Sugimoto, T.; Ogiwani, S.; Teradaira, R.; Fujita, K.; Nagtsu, T. Biogenic Amines 1992, 9, 77-82.
25. Ogiwara, S.; Hidaka, H.; Sugimoto, T.; Teradaira, R.; Fujita, K.; Nagatsu, T. J. Biochem. 1993, 113, 1-3.
26. Hibiya, M.; Teradaira, R.; Sugimoto, T.; Fujita, K.; Nagatsu, T. J. Chormatogr., B 1995, 672, 143-148.
27. Pfleiderer, W.; Lohrmann, R. Chem. Ber. 1961, 94, 12-18.
28. Yoshikawa, K.; Malsuzawa, Y.; Minagawa, K.; Doi, M.; Matsumoto, M. Biochem. Biophys. Res. Commun. 1992, 188, 1274-1279.
29. Grasso, D.; Fasone, S.; La Rosa, C.; Silyanov, V. Liq. Cryst. 1991, 9, 299-305.
30. Grasso, D.; Campisi, R. G.; La Rosa, C. Thermochim. Acta 1992, 199 (1), 239-246
31. Mahler, H. R.; Mehrotra, B. D. Biochim. Biophys. Acta 1963, 68, 211-233.
32. Thomas, T. J.; Kulkarni, G. D.; Greenfield, N. J.; Shirahala, A.; Thomas, T. Biochem. J. 1996, 319, 591-599.
33. Antony, T.; Thomas, T.; Shirahata, A.; Tomas, T. J. Biochemistry 1999, 38, 10775-10784.
34. Shindler, T.; Nordmeier, E. Polymer 1999, 40, 7019-7027.
35. Reynisson, J.; Schuster, G. B.; Howerton, S. B.; Williams, L. D.; Barnett, R. N.; Cleveland, C. L.; Landman, U.; Harrit, N.; Chaires, J. B. J. Am. Chem. Soc. 2003, 125, 2072-2083.
36. a values with cationic characters of the pteridine-polyamine conjugates is discussed in the reference: Chen, N.; Murata, S.; Yoshikawa, K. Chem.-Eur. J., in press.
37. Hud, N. V.; Downing, K. H. Proc. Natl. Acad Sci. U.S.A. 2001, 98, 14925-14930.
38. Conwell, C. C.; Vilfan, I. D.; Hud, N. V. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 9296-9301.