메뉴 건너뛰기




Volumn 120, Issue 14, 2004, Pages 6756-6763

Annealing contour Monte Carlo algorithm for structure optimization in an off-lattice protein model

Author keywords

[No Author keywords available]

Indexed keywords

ANNEALING CONTOUR MONTE CARLO (ACMC) ALGORITHM; FIBONACCI SEQUENCES; OFF-LATTICE PROTEIN MODEL; PUTATIVE GROUND ENERGY; STRUCTURE OPTIMIZATION;

EID: 2342642876     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.1665529     Document Type: Article
Times cited : (54)

References (35)
  • 1
    • 0024750637 scopus 로고
    • K. F. Lau and K. A. Dill, Macromolecules 22, 3986 (1989); H. S. Chan and K. A. Dill, J. Chem. Phys. 95, 3775 (1991); D. Shortle, H. S. Chan, and K. A. Dill, Protein Sci. 1, 201 (1992).
    • (1989) Macromolecules , vol.22 , pp. 3986
    • Lau, K.F.1    Dill, K.A.2
  • 2
    • 33744825406 scopus 로고
    • K. F. Lau and K. A. Dill, Macromolecules 22, 3986 (1989); H. S. Chan and K. A. Dill, J. Chem. Phys. 95, 3775 (1991); D. Shortle, H. S. Chan, and K. A. Dill, Protein Sci. 1, 201 (1992).
    • (1991) J. Chem. Phys. , vol.95 , pp. 3775
    • Chan, H.S.1    Dill, K.A.2
  • 3
    • 0027050824 scopus 로고
    • K. F. Lau and K. A. Dill, Macromolecules 22, 3986 (1989); H. S. Chan and K. A. Dill, J. Chem. Phys. 95, 3775 (1991); D. Shortle, H. S. Chan, and K. A. Dill, Protein Sci. 1, 201 (1992).
    • (1992) Protein Sci. , vol.1 , pp. 201
    • Shortle, D.1    Chan, H.S.2    Dill, K.A.3
  • 4
    • 0001747878 scopus 로고
    • K. Yue and K. A. Dill, Phys. Rev. E 48, 2267 (1993); Proc. Natl. Acad. Sci. U.S.A. 92, 146 (1995).
    • (1993) Phys. Rev. E , vol.48 , pp. 2267
    • Yue, K.1    Dill, K.A.2
  • 5
    • 0028950075 scopus 로고
    • K. Yue and K. A. Dill, Phys. Rev. E 48, 2267 (1993); Proc. Natl. Acad. Sci. U.S.A. 92, 146 (1995).
    • (1995) Proc. Natl. Acad. Sci. U.S.A. , vol.92 , pp. 146
  • 7
    • 0001635440 scopus 로고    scopus 로고
    • G. Chikenji, M. Kikuchi, and Y. Iba, Phys. Rev. Lett. 83, 1886 (1999); G. Chikenji and M. Kikuchi, Proc. Natl. Acad. Sci. U.S.A. 97, 14273 (2000).
    • (1999) Phys. Rev. Lett. , vol.83 , pp. 1886
    • Chikenji, G.1    Kikuchi, M.2    Iba, Y.3
  • 12
    • 42749103620 scopus 로고    scopus 로고
    • H. P. Hsu, V. Mehra, W. Nadler, and P. Grassberger, J. Chem. Phys. 118, 444 (2003); Phys. Rev. E 68, 021113 (2003).
    • (2003) Phys. Rev. E , vol.68 , pp. 021113
  • 13
    • 2342651582 scopus 로고    scopus 로고
    • edited by Russ B. Altman et al. World Scientific, Singapore
    • S. Will, in Proceedings of the Pacific Symposium on Biocomputing 2002 (PSB 2002), edited by Russ B. Altman et al. (World Scientific, Singapore, 2002); R. Backofen and S. Will, in Proceedings of the 12th Annual Symposium on Combinatorial Pattern Matching (CPM2001), edited by Amihood Amir et al., Lecture Notes in Computer Sciences 2089 (Springer-Verlag, Berlin, 2001); for a web application, see http://www.bio.inf.unijena.de/Prediction/prediction.cgi
    • (2002) Proceedings of the Pacific Symposium on Biocomputing 2002 (PSB 2002)
    • Will, S.1
  • 14
    • 2342481324 scopus 로고    scopus 로고
    • Proceedings of the 12th Annual Symposium on Combinatorial Pattern Matching (CPM2001), edited by Amihood Amir et al. Springer-Verlag, Berlin
    • S. Will, in Proceedings of the Pacific Symposium on Biocomputing 2002 (PSB 2002), edited by Russ B. Altman et al. (World Scientific, Singapore, 2002); R. Backofen and S. Will, in Proceedings of the 12th Annual Symposium on Combinatorial Pattern Matching (CPM2001), edited by Amihood Amir et al., Lecture Notes in Computer Sciences 2089 (Springer-Verlag, Berlin, 2001); for a web application, see http://www.bio.inf.unijena.de/Prediction/prediction.cgi
    • (2001) Lecture Notes in Computer Sciences , vol.2089
    • Backofen, R.1    Will, S.2
  • 15
    • 84862346359 scopus 로고    scopus 로고
    • S. Will, in Proceedings of the Pacific Symposium on Biocomputing 2002 (PSB 2002), edited by Russ B. Altman et al. (World Scientific, Singapore, 2002); R. Backofen and S. Will, in Proceedings of the 12th Annual Symposium on Combinatorial Pattern Matching (CPM2001), edited by Amihood Amir et al., Lecture Notes in Computer Sciences 2089 (Springer-Verlag, Berlin, 2001); for a web application, see http://www.bio.inf.unijena.de/Prediction/prediction.cgi
  • 18
    • 0242622910 scopus 로고
    • F. H. Stillinger, T. Head-Gordon, and C. L. Hirshfeld, Phys. Rev. E 48, 1469 (1993); T. Head-Gordon and F. H. Stillinger, ibid. 48, 1502 (1993).
    • (1993) Phys. Rev. E. , vol.48 , pp. 1502
    • Head-Gordon, T.1    Stillinger, F.H.2
  • 20
    • 2342489547 scopus 로고    scopus 로고
    • F. Liang (unpublished)
    • F. Liang (unpublished).
  • 22
    • 0035506610 scopus 로고    scopus 로고
    • F. Wang and D. P. Landau, Phys. Rev. Lett. 86, 2050 (2001); Phys. Rev. E 64, 056101 (2001).
    • (2001) Phys. Rev. E , vol.64 , pp. 056101
  • 30
    • 77956890234 scopus 로고
    • N. Metropolis, A. W. Rosenbluth, M. N. Rosenbluth, A. H. Teller, and E. Teller, J. Chem. Phys. 21, 1087 (1953); W. K. Hastings, Biometrika 57, 97 (1970).
    • (1970) Biometrika , vol.57 , pp. 97
    • Hastings, W.K.1
  • 32
    • 0041809827 scopus 로고
    • B. A. Berg and T. Neuhaus, Phys. Lett. B 267, 291 (1991); Phys. Rev. Lett. 68, 9 (1992); B. A. Berg and T. Celik. ibid. 69, 2292 (1992).
    • (1991) Phys. Lett. B , vol.267 , pp. 291
    • Berg, B.A.1    Neuhaus, T.2
  • 33
    • 84886058336 scopus 로고
    • B. A. Berg and T. Neuhaus, Phys. Lett. B 267, 291 (1991); Phys. Rev. Lett. 68, 9 (1992); B. A. Berg and T. Celik. ibid. 69, 2292 (1992).
    • (1992) Phys. Rev. Lett. , vol.68 , pp. 9
  • 34
    • 0001629677 scopus 로고
    • B. A. Berg and T. Neuhaus, Phys. Lett. B 267, 291 (1991); Phys. Rev. Lett. 68, 9 (1992); B. A. Berg and T. Celik. ibid. 69, 2292 (1992).
    • (1992) Phys. Rev. Lett. , vol.69 , pp. 2292
    • Berg, B.A.1    Celik, T.2
  • 35
    • 0344521704 scopus 로고    scopus 로고
    • edited by J. M. Bernardo, J. O. Berger, A. P. Dawid, and A. F. M. Smith (Oxford University Press, Oxford)
    • A. Gelman, R. O. Roberts, and W. R. Gilks, in Bayesian Statistics 5, edited by J. M. Bernardo, J. O. Berger, A. P. Dawid, and A. F. M. Smith (Oxford University Press, Oxford, 1996).
    • (1996) Bayesian Statistics , vol.5
    • Gelman, A.1    Roberts, R.O.2    Gilks, W.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.