Genetic diversity estimates in Cicer using AFLP analysis

Plant Breeding

Volumn 123, Issue 2, 2004, Pages 173-179

  Nguyen, T T ^a   Taylor, P W J ^a   Redden, R J ^b   Ford, R ^a  

^a UNIVERSITY OF MELBOURNE   (Australia)

^b DEPARTMENT OF PRIMARY INDUSTRIES   (Australia)

Author keywords

AFLP; Cicer arietinum; Genetic variation

Indexed keywords

CICER; CICER ARIETINUM; CICER BIJUGUM; CICER CUNEATUM; CICER ECHINOSPERMUM; CICER JUDAICUM; CICER MACRACANTHUM; CICER PINNATIFIDUM; CICER RETICULATUM; CICER YAMASHITAE; EMBRYOPHYTA;

EID: 2342505879     PISSN: 01799541     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1439-0523.2003.00942.x     Document Type: Article

References (44)

1. Ahmad, F., 1999: Random amplified polymorphic DNA (RAPD) analysis reveals genetic relationships among the annual Cicer species. Theor. Appl. Genet. 98, 657-663.
2. Ahmad, F., and A. E. Slinkard, 1992: Genetic relationships in the genus Cicer L. as revealed by polyacrylamide gel electrophoresis of seed storage proteins. Theor. Appl. Genet. 84, 688-692.
3. Ahmad, F., A. E. Slinkard, and G. J. Scoles, 1988: Investigations into barrier(s) to interspecific hybridization between Cicer arietinum L. and eight other annual Cicer species. Plant Breeding 100, 193-198.
4. Ahmad, F., P. M. Gaur, and A. E. Slinkard, 1992: Isozyme polymorphism and phylogenetic interpretations in the genus Cicer L. Theor. Appl. Genet. 83, 620-627.
5. Badami, P. S., N. Nallikarjuna, and J. P. Moss, 1997: Interspecific hybridization between Cicer arietinum and C. pinnatifidum. Plant Breeding 116, 393-395.
6. Berger, J., J. Abbo, and N. C. Turner, 2003: Ecogeography of annual wild Cicer species: The poor state of the world collection. Crop Science 43, 1076-1090.
7. Caicedo, A. L., E. Gaitan, M. C. Duque, O. T. Chica, D. G. Debouck, and J. Tohme, 1999: AFLP fingerprinting of Phaseolus lunatus L. and related wild species from South America. Crop Sci. 39, 1497-1507.
8. Choumane, W., P. Winter, F. Weigand, and G. Kahl, 2000: Conservation and variability of sequence-tagged microsatellite sites (STMSs) from chickpea (Cicer arietinum L.) within the genus Cicer. Theor. Appl. Genet. 101, 269-278.
9. Collard, B. C. Y., E. C. K. Pang, and P. W. J. Taylor, 2003a: Selection of wild Cicer accessions for the generation of mapping populations segregating for resistance to ascochyta blight. Euphytica 130, 1-9.
10. Collard, B. C. Y., E. C. K. Pang, P. K. Ades, and P. W. J. Taylor, 2003b: Preliminary investigation of QTLs associated with seedling resistance to ascochyta blight from Cicer echinospermum, a wild relative of chickpea. Theor. Appl. Genet. 107, 719-729.
11. Don, R. H., P. T. Cox, B. J. Wainwright, and J. S. Mattick, 1991: Touchdown PCR to circumvent spurious priming during gene amplification. Nucl. Acids Res. 19, 4008.
12. Guohao, H., and P. Channapatna, 2001: Evaluation of genetic relationships among botanical varieties of cultivated peanut (Arachis hypogaea L.) using AFLP markers. Genet. Res. Crop Evol. 48, 347-252.
13. Gupta, P. K., R. K. Varshney, P. C. Sharma, and B. Ramesh, 1999: Molecular markers and their applications in wheat breeding. Plant Breeding 118, 369-390.
14. Haware, M. P., J. R. Narayana, and R. P. S. Pundir, 1992: Evaluation of wild Cicer species for resistance to four chickpea diseases. International Chickpea Newsletter 27, 16-18.
15. Hill, M., H. Witsenboer, M. Zabeau, P. Vos, R. Kesseli, and R. Michelmore, 1996: PCR-based fingerprinting using AFLP's as a tool for studying genetic relationships in Latuca spp. Theor. Appl. Genet. 93, 1202-1210.
16. International Centre for Agricultural Research in the Dryland Areas, 1998: Interspecific Hybridization in Chickpea. Annual Report 1998, 31. http://www.icarda.cgiar.org/Publications/AnnualReport/98/An-Page31.HTML.
17. Iruela, M., J. Rubio, J. I. Cubero, J. Gil, and T. Millan, 2002: Phylogenetic analysis in the genus Cicer and cultivated chickpea using RAPD and ISSR markers. Theor. Appl. Genet. 104, 643-651.
18. Kazan, K., and F. J. Muehlbauer, 1991: Allozyme variation and phylogeny in annual species of Cicer (Leguminosae). Plant Syst. Evol. 175, 11-21.
19. Kumar, S., K. Tamua, I. B. Jakobsen, and M. Nei, 2001: MEGA 2.1: Molecular Evolutionary Genetics Analysis. http://www.megasoftware.net/.
20. Labdi, M., L. D. Robertson, K. B. Singh, and A. Charrier, 1996: Genetic diversity and phylogenetic relationships among the annual Cicer species as revealed by isozyme polymorphisms. Euphytica 88, 181-188.
21. Ladizinsky, G., and A. Adler, 1976: Genetic relationships among the annual species of Cicer L. Theor. Appl. Genet. 48, 197-203.
22. van der Maesen, L. J. G., 1987: Origin, history and taxonomy of chickpea. In: M. C. Saxena, and K. B. Singh (eds), The Chickpea, 11-34. CAB International Publishers, UK.
23. Muehlbauer, F. J., W. J. Kaiser, and C. J. Simon, 1994: Potential for wild species in cool season food legume breeding. Euphytica 73, 109-114.
24. Nei, M., 1978: Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89, 583-590.
25. Ocampo, B., G. Venora, A. Errico, K. B. Singh, and F. Saccardo, 1992: Karyotype analysis of the Cicer genus. J. Genet. Breed. 46, 229-240.
26. Ohri, D., and M. Pal, 1991: The origin of chickpea (Cicer arietinum L.) karyotype and nuclear DNA amount. Heredity 66, 367-372.
27. Paul, S., F. N. Wachira, W. Powell, and R. Waugh, 1997: Diversity and genetic differentiation among populations of Indian and Kenyan tea (Camellia sinensis (L) O. Kuntze) revealed by AFLP markers. Theor. Appl. Genet. 94, 255-263.
28. Rajesh, P. N., V. J. Sant, V. S. Gupta, F. J. Muehlbauer, and P. K. Ranjekar, 2002: Genetic relationships among annual and perennial wild species of Cicer using inter simple sequence repeat (ISSR) polymorphism. Euphytica 129, 15-23.
29. Robertson, L. D., B. Ocampo, and K. B. Singh, 1997: Morphological variation in wild annual Cicer species in comparison to the cultigen. Euphytica 95, 309-319.
30. Ru-Qiang, X., N. Tomooka, and D. A. Vaughan, 2000: AFLP markers for characterizing the Azuki bean complex. Crop Sci. 40, 808-815.
31. Serret, M. D., S. M. Udupa, and F. Weigand, 1997: Assessment of genetic diversity of cultivated chickpea using microsatellite-derived RFLP markers: implications for origin. Plant Breeding 116, 573-578.
32. Singh, K. B., and B. Ocampo, 1993: Interspecific hybridization in annual Cicer species. J. Genet. Breed. 47, 199-204.
33. Singh, K. B., and B. Ocampo, 1997: Exploitation of wild Cicer species for yield improvement in chickpea. Theor. Appl. Genet. 95, 418-423.
34. Singh, K. B., G. C. Hawtin, Y. L. Nene, and M. V. Reddy, 1981: Resistance in chickpeas to Ascochyta rabiei. Plant disease 65, 586-587.
35. Singh, K. B., R. S. Malhotra, M. H. Halila, E. J. Knights, and M. M. Verma, 1994: Current status and future strategy in breeding chickpea for resistance to biotic and abiotic stresses. Euphytica 73, 137-149.
36. Singh, K., B. Ocampo, and L. D. Robertson, 1998: Diversity for abiotic and biotic stress resistance in the wild annual Cicer species. Genet. Res. Crop Evol. 45, 9-17.
37. Stamigna, C., R. Mancinelli, P. Crino, A. Infantino, A. Porta-Puglia, and F. Saccardo, 1998: Multiple resistances to diseases in wild relatives of chickpea (Cicer arietinum L.). In: Proceedings of the 3rd European Conference on Grain Legumes, Valladolid, Spain.
38. Sudupak, M. A., M. S. Akkaya, and A. Kence, 2002: Analysis of genetic relationships among perennial and annual Cicer species growing in Turkey using RAPD markers. Theor. Appl. Genet. 105, 1220-1228.
39. Taylor, P. W. J., T. A. Fraser, H. L. Ko, and R. J. Henry, 1995: RAPD analysis of sugarcane during tissue culture. In: M. Terzi, R. Cella, and A. Falavigna (eds), Current Issue in Plant Molecular and Cellular Biology, 241-246. Kluwer Academic International, Dordrecht.
40. Tayyar, R. I., and J. G. Waines, 1996: Genetic relationships among annual species of Cicer (Fabaceae) using isozyme variation. Theor. Appl. Genet. 92, 245-254.
41. Tohme, J., D. O. Gonzalez, S. Beebe, and M. C. Duque, 1996: AFLP analysis of the gene pool of a wild bean core collection. Crop Sci. 36, 1375-1384.
42. Vos, P., R. Hogers, M. Bleeker, M. Reijans, T. V. D. Lee, M. Hornes, A. Frijters, J. Pot, J. Peleman, M. Kuiper, and M. Zabeau, 1995: AFLP: a new technique for DNA fingerprinting. Nucl. Acids Res. 23, 4407-4414.
43. Weir, B. S., 1990: Intraspecific differentiation. In: D.M. Hillis, and C. Moritz (eds), Molecular Systematics, 373-410. Sinauer Associates, Sunderland, MA, USA.
44. Yeh, F. C., R.-C. Yang, T. B. J. Boyle, Z.-H. Ye, and J. X. Mao 1997: POPGENE, the User-Friendly Shareware for Population Genetic Analysis. Molecular Biology and Biotechnology Centre, University of Alberta, Canada. http://www.ualberta.ca/~fyeh/.