Microsatellites as DNA markers in cultivated peanut (Arachis hypogaea L.)

BMC Plant Biology

Volumn 3, Issue , 2003, Pages

  He, Guohao ^a   Meng, Ronghua ^a   Newman, Melanie ^b   Gao, Guoqing ^c   Pittman, Roy N ^b   Prakash, C S ^a  

^a TUSKEGEE UNIVERSITY   (United States)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

^c NATIONAL ENGINEERING RESEARCH CENTER FOR NON FOOD BIOREFINERY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ARACHIS; ARACHIS HYPOGAEA;

GENETIC MARKER; MICROSATELLITE DNA; PLANT DNA; PRIMER DNA;

ALLELE; GENETIC MARKER; GENETIC POLYMORPHISM; GENETICS; GENOTYPE; PEANUT; PLANT GENOME;

ALLELES; ARACHIS HYPOGAEA; DNA PRIMERS; DNA, PLANT; GENETIC MARKERS; GENOME, PLANT; GENOTYPE; MICROSATELLITE REPEATS; POLYMORPHISM, GENETIC;

EID: 2342420602     PISSN: 14712229     EISSN: 14712229     Source Type: Journal    
DOI: 10.1186/1471-2229-3-3     Document Type: Article

References (34)

1. Weber JL Informativeness of human (dC-dA)n (dG-dT)n polymorphism Genomics 1990, 7:524-530
2. Akkaya MS, Bhagwat AA and Cregan PB Length polymorphisms of simple sequence repeat DNA in soybean Genetics 1992, 132:1131-1139
3. Morgante M and Olivieri AM PCR-amplified microsatellites as markers in plant genetics The Plant J 1993, 3(1):175-182
4. Gupta M, Chyi YS, Severson JR and Owen JL Amplification of DNA markers from evolutionatily diverse genomes using single primers of simple-sequence repeats Theor Appl Genet 1994, 89:998-1006
5. Sharon D, Adato A, Mhameed S, Lavi U, Hillel J, Gomolka M, Epplen C and Epplen JT DNA fingerprints in plants using simple-sequence repeat and minisatellite probes HortScience 1995, 30(1):109-112
6. Hamann A, Zink D and Nagl W Microsatellite fingerprinting in the genus Phaseolus Genome 1995, 38:507-515
7. Rongwen J, Akkaya MS, Bhagwat AA, Lavi U and Cregan PB The use of microsatellite DNA markers for soybean genotype identification Theor Appl Genet 1995, 90:43-48
8. Tanaka K, Tsumura Y and Nakamura T Development and polymorphism of microsatellite markers for Fagus crenata and the closely related species, F. japonica Theor Appl Genet 1999, 99:11-15
9. Cregan PB, Mudge J, Fickus EW, Marek DD, Denny R, Shoemaker RC, Matthews BF, Jarvik T and Young ND Targeted isolation of simple sequence repeat markers through the use of bacterial artificial chromosomes Theor Appl Genet 1999, 98:919-928
10. Brown SM, Szewc-McFadden AK and Kresovich S Development and application of simple sequence repeat (SSR) loci for plant genome analysis In: Methods of genome analysis in plants (Edited by: Jauhar PP) CRC Press, Inc. Boca Raton New York London Tokyo 1996, 147-159
11. Billotte N, Risterucci AM, Barcelos E, Noyer JL, Amblard P and Baurens FC Development, characterization, and across-taxa utility of oil palm (Elaeis guineensis Jacq.) microsatellite markers Genome 2001, 44:413-425
12. Edwards KJ, Barker JHA, Daly A, Jones C and Karp A Microsatellite libraries enriched for several microsatellite sequences in plants Biotechniques 1996, 20:758-760
13. Butcher PA, Decroocq S, Gray Y and Moran GF Development, inheritance and cross-species amplification of microsatellite markers from Acacia mangium Theor Appl Genet 2000, 101:1282-1290
14. Zane L, Bargelloni L and Patarnello T Strategies for microsatellite isolation: a review Molecular Ecology 2002, 11:1-16
15. Kochert GA, Halward TM, Branch WD and Simpson CE RFLP variability in peanut cultivars and wild species Theor Appl Genet 1991, 81:565-570
16. Halward TM, Stalker HT, Larue EA and Kochert GA Genetic variation detectable with molecular markers among unadapted germplasm resources of cultivated peanut and related wild species Genome 1991, 34:1013-1020
17. Halward TM, Stalker HT, Larue EA and Kochert GA Use of single primer DNA amplification in genetic studies of peanut (Arachis hypogaea L) Plant Mol Biol 1992, 18:315-325
18. Paik-Ro OG, Smith RL and Knauft DA Restrication fragment length polymorphism evaluation of six peanut species within the Arachis section Theor Appl Genet 1992, 84:201-208
19. Stalker HT, Phillips TG, Murphy JP and Jones TM Diversity of isozyme patterns in Arachis species Theor Appl Genet 1994, 87:746-755
20. Zhao XP and Kochert GA Phylogenetic distribution and genetic mapping of a (GGC)n microsatellite from rice (Oryza sativa L) Plant Mol Bio 1993, 21:607-614
21. Hopkins MS, Casa AM, Wang T, Mitchell SE, Dean RE, Kochert GD and Kresovich S Discovery and characterization of polymorphic simple sequence repeats (SSRs) in cultivated peanut (Arachis hypogaea L) Crop Sci 1999, 39:1243-1247
22. Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hornes M, Fritjers A, Peleman J, Kuiper M and Zabeau M AFLP : a new tool for DNA finger-printing Nucleic Acids Res 1995, 23:4407-4414
23. Mellersh C and Sampson J Simplifying detection of microsatellite length polymorphisms BioTechniques 1993, 15:582-584
24. Stalker HT and Mozingo LG Molecular markers of Arachis and marker-assisted selection Peanut Science 2001, 28:117-123
25. Garcia GM, Stalker HT, Shroeder E and Kochert GA Identification of RAPD, SCAR and RFLP markers tightly linked to nematode resistance genes introgressed from Arachis cardenasii to A. hypogaea Genome 1996, 39:836-845
26. Burow MD, Starr JL, Simpson CE and Paterson AH Identification of RAPD markers in peanut (Arachis hypogaea) associated with root-knot nematode resistance derived from A. cardenasii Molec Breed 1996, 2:307-319
27. He GH and Prakash CS Identification of polymorphic DNA markers in cultivated peanut (Arachis hypogea L) Euphytica 1997, 97:143-149
28. Kijas JMH, Fowler JCS, Garbett CA and Thomas MR Enrichment of microsatellites from the Citrus genome using biotinylated oligonucleotide sequences bound to streptavidin-coated magnetic particles BioTechniques 1994, 16:657-662
29. Fischer D and Bachmann K Microsatellite enrichment in organisms with large genomes (Allium cepa L) BioTechniques 1998, 24:796-802
30. Song QJ, Fickus EW and Cregan PB Construction of wheat genomic libraries enriched for microsatellite sequences In Proceedings of 2000 National Fusarium Head Blight Forum, Cincinnati, OH (Edited by: Jauhar PP) 2000, 50-51
31. Reddy OUK, Pepper AE, Abdurakhmonov I, Saha S, Jenkins JN, Brooks T, Bolek Y and El-Zik KM New dinucleotide and trinucleotide microsatellite marker resources for cotton genome research J Cotton Sci 2001, 5:103-113
32. Yu JK, Mangor J, Thompson L, Edwards KJ, Slabaugh MB and Knapp SJ Allelic diversity of simple sequence repeats among elite inbred lines of cultivated sunflower Genome 2002, 45(4):652-660
33. Cifarelli RA, Gallitelli M and Cellini F Random amplified hybridization microsatellites (RAHM): isolation of a new class of microsatellite-containing DNA clones Nuclei Acids Research 1995, 23(18):3802-3803
34. Areshchenkova T and Ganal MW Comparative analysis of polymorphism and chromosomal location of tomato microsatellite markers isolated from different sources Theor Appl Genet 2002, 104:229-235