Molecular biology: Rewiring of the yeast transcriptional network through the evolution of motif usage

Science

Volumn 309, Issue 5736, 2005, Pages 938-940

  Ihmels, Jan ^a   Bergmann, Sven ^a   Gerami Nejad, Maryam ^b   Yanai, Itai ^a   McClellan, Mark ^b   Berman, Judith ^b   Barkai, Naama ^a  

^a WEIZMANN INSTITUTE OF SCIENCE   (Israel)

^b UNIVERSITY OF MINNESOTA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOLOGY; FERMENTATION; GENES; GENETIC ENGINEERING; MOLECULAR BIOLOGY; PROTEINS;

GENE CODING; GENE EXPRESSION; RIBOSOMAL PROTEINS; TRANSCRIPTIONAL NETWORKS;

YEAST;

CIS ACTING ELEMENT; CYTOPLASM PROTEIN; MITOCHONDRIAL PROTEIN; RIBOSOME PROTEIN; RIBOSOME RNA; FUNGAL DNA; FUNGAL PROTEIN; OXYGEN;

YEAST;

ANAEROBIC GROWTH; ARTICLE; CANDIDA ALBICANS; CORRELATION ANALYSIS; FUNGAL GENE; FUNGAL GENETICS; FUNGUS GROWTH; GENE DUPLICATION; GENE EXPRESSION REGULATION; GENE FREQUENCY; GENE FUNCTION; GENE SEQUENCE; GENETIC TRANSCRIPTION; GENOME ANALYSIS; MOLECULAR EVOLUTION; NONHUMAN; PHENOTYPIC VARIATION; PHYLOGENETIC TREE; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE; TRANSCRIPTION REGULATION; YEAST; AEROBIC METABOLISM; CYTOPLASM; FERMENTATION; GENETICS; METABOLISM; NUCLEOTIDE SEQUENCE; PROMOTER REGION; REGULATORY SEQUENCE;

CANDIDA ALBICANS; FUNGI; SACCHAROMYCES CEREVISIAE;

AEROBIOSIS; BASE SEQUENCE; CANDIDA ALBICANS; CYTOPLASM; DNA, FUNGAL; EVOLUTION, MOLECULAR; FERMENTATION; FUNGAL PROTEINS; GENE DUPLICATION; GENE EXPRESSION REGULATION, FUNGAL; MITOCHONDRIAL PROTEINS; OXYGEN; PROMOTER REGIONS (GENETICS); REGULATORY SEQUENCES, NUCLEIC ACID; RIBOSOMAL PROTEINS; SACCHAROMYCES CEREVISIAE; TRANSCRIPTION, GENETIC; YEASTS;

EID: 23244467882     PISSN: 00368075     EISSN: None     Source Type: Journal    
DOI: 10.1126/science.1113833     Document Type: Article

References (16)

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15. Methods are available as supporting material on Science Online. See also www.weizmann.ac.il/home/barkai/Rewiring.
16. We thank the following for providing transcription profiling data sets: R. Bennett, A. Tsong, A. Johnson, M. Lorenz, C. D'enfert, G. Fink, M. Whiteway, A. Nantel, P. D. Rogers, and especially D. Davis, D. Harcus, B. Hube, and D. Sanglard, for providing transcription profile data sets before publication. We also thank A. Nantel, C. D'enfert, and A. Tsong for providing gene name information that allowed assignment of genes on different arrays to their orf19 gene identities. This work was supported by NIH grants A150562 (N.B.) and R01 DE/AI 14666 (J.B.) and a grant from the Kahn Fund for Systems Biology at the Weizmann Institute of Science (N.B.).