-
1
-
-
0036187297
-
Deriving structural and functional insights from a ligand-based hierarchical classification of G protein-coupled receptors
-
Attwood,T.K., Croning,M.D. and Gaulton,A. (2002) Deriving structural and functional insights from a ligand-based hierarchical classification of G protein-coupled receptors. Protein Eng., 15, 7-12.
-
(2002)
Protein Eng.
, vol.15
, pp. 7-12
-
-
Attwood, T.K.1
Croning, M.D.2
Gaulton, A.3
-
2
-
-
0031803634
-
GPCRDB: An information system for G protein-coupled receptors
-
Horn,F, Weare,J., Beukers,M.W., Hörsch,S., Bairoch,A., Chen,W., Edvardsen,Ø., Campagne,F. and Vriend,G. (1998) GPCRDB: An information system for G protein-coupled receptors. Nucleic Acids Res., 26, 277-281.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 277-281
-
-
Horn, F.1
Weare, J.2
Beukers, M.W.3
Hörsch, S.4
Bairoch, A.5
Chen, W.6
Edvardsen, Ø.7
Campagne, F.8
Vriend, G.9
-
3
-
-
0037433697
-
Automated generation and refinement of protein signatures: Case study with G-protein coupled receptors
-
Sadowski,M.I. and Parish,J.H. (2003) Automated generation and refinement of protein signatures: Case study with G-protein coupled receptors. Bioinformatics, 19, 727-734.
-
(2003)
Bioinformatics
, vol.19
, pp. 727-734
-
-
Sadowski, M.I.1
Parish, J.H.2
-
4
-
-
0036166451
-
Classifying G-protein coupled receptors with support vector machines
-
Karchin,R., Karplus,K. and Haussler,D. (2002) Classifying G-protein coupled receptors with support vector machines. Bioinformatics, 18, 147-159.
-
(2002)
Bioinformatics
, vol.18
, pp. 147-159
-
-
Karchin, R.1
Karplus, K.2
Haussler, D.3
-
5
-
-
0035170508
-
Collecting and harvesting biological data: The GPCRDB and NucleaRDB information systems
-
Horn,F., Vriend,G. and Cohen,F.E. (2001) Collecting and harvesting biological data: The GPCRDB and NucleaRDB information systems. Nucleic Acids Res., 29, 346-349.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 346-349
-
-
Horn, F.1
Vriend, G.2
Cohen, F.E.3
-
6
-
-
0036130770
-
Classification of G-protein coupled receptors by alignment-independent extraction of principal chemical properties of primary amino acid sequences
-
Lapinsh,M., Gutcaits,A., Prusis,P., Post,C., Lundstedt,T. and Wikberg,J.E. (2002) Classification of G-protein coupled receptors by alignment-independent extraction of principal chemical properties of primary amino acid sequences. Protein Sci., 11, 795-805.
-
(2002)
Protein Sci.
, vol.11
, pp. 795-805
-
-
Lapinsh, M.1
Gutcaits, A.2
Prusis, P.3
Post, C.4
Lundstedt, T.5
Wikberg, J.E.6
-
7
-
-
3242892058
-
GPCRpred: An SVM-based method for prediction of families and subfamilies of G-protein coupled receptors
-
Bhasin,M. and Raghava,G.P.S. (2004) GPCRpred: An SVM-based method for prediction of families and subfamilies of G-protein coupled receptors. Nucleic Acids Res., 32, W383-W389.
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Bhasin, M.1
Raghava, G.P.S.2
-
8
-
-
0036762915
-
A study on the correlation of G-protein-coupled receptor types with amino acid composition
-
Elrod,D.W. and Chou,K.C. (2002) A study on the correlation of G-protein-coupled receptor types with amino acid composition. Protein Eng., 15, 713-715.
-
(2002)
Protein Eng.
, vol.15
, pp. 713-715
-
-
Elrod, D.W.1
Chou, K.C.2
-
9
-
-
1342288007
-
SVM based method for predicting HLA-DRB1*0401 binding peptides in an antigen sequence
-
Bhasin,M. and Raghava,G.P. (2004) SVM based method for predicting HLA-DRB1*0401 binding peptides in an antigen sequence. Bioinformatics, 20, 421-423.
-
(2004)
Bioinformatics
, vol.20
, pp. 421-423
-
-
Bhasin, M.1
Raghava, G.P.2
-
10
-
-
0037195776
-
Using functional domain composition and support vector machines for prediction of protein subcellular location
-
Chou,K.C. and Cai,Y.D. (2002) Using functional domain composition and support vector machines for prediction of protein subcellular location. J. Biol. Chem., 277, 45765-45769.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 45765-45769
-
-
Chou, K.C.1
Cai, Y.D.2
-
11
-
-
0035672036
-
Support vector machines for prediction of protein subcellular location by incorporating quasi-sequence-order effect
-
Cai,Y.D., Liu,X.J., Xu,X.B. and Chou,K.C. (2002) Support vector machines for prediction of protein subcellular location by incorporating quasi-sequence-order effect. J. Cell. Biochem., 84, 343-348.
-
(2002)
J. Cell. Biochem.
, vol.84
, pp. 343-348
-
-
Cai, Y.D.1
Liu, X.J.2
Xu, X.B.3
Chou, K.C.4
-
12
-
-
0842326624
-
Application of SVM to predict membrane protein types
-
Cai,Y.D., Pong-Wong,R., Feng,K., Jen,J.C.H. and Chou,K.C. (2004) Application of SVM to predict membrane protein types. J. Theor. Biol., 226, 373-376.
-
(2004)
J. Theor. Biol.
, vol.226
, pp. 373-376
-
-
Cai, Y.D.1
Pong-Wong, R.2
Feng, K.3
Jen, J.C.H.4
Chou, K.C.5
-
13
-
-
0038636605
-
Support vector machines for predicting membrane protein types by using functional domain composition
-
Cai,Y.D., Zhou,G.P. and Chou,K.C. (2003) Support vector machines for predicting membrane protein types by using functional domain composition. Biophys. J., 84, 3257-3263.
-
(2003)
Biophys. J.
, vol.84
, pp. 3257-3263
-
-
Cai, Y.D.1
Zhou, G.P.2
Chou, K.C.3
-
14
-
-
2642547217
-
Identify catalytic triads of serine hydrolases by support vector machines
-
Cai,Y.D., Zhou,G.P., Jen,C.H., Lin,S.L. and Chou,K.C. (2004) Identify catalytic triads of serine hydrolases by support vector machines. J. Theor. Biol., 228, 551-557.
-
(2004)
J. Theor. Biol.
, vol.228
, pp. 551-557
-
-
Cai, Y.D.1
Zhou, G.P.2
Jen, C.H.3
Lin, S.L.4
Chou, K.C.5
-
15
-
-
8444248846
-
Weighted-support vector machines for predicting membrane protein types based on pseudo amino acid composition
-
Wang,M., Yang,J., Liu,G.P., Xu,Z.J. and Chou,K.C. (2004) Weighted-support vector machines for predicting membrane protein types based on pseudo amino acid composition. Protein Eng. Des. Sel., 17, 509-516.
-
(2004)
Protein Eng. Des. Sel.
, vol.17
, pp. 509-516
-
-
Wang, M.1
Yang, J.2
Liu, G.P.3
Xu, Z.J.4
Chou, K.C.5
-
16
-
-
1842455240
-
Bio-support vector machines for computational proteomics
-
Yang,Z.R. and Chou,K.C. (2004) Bio-support vector machines for computational proteomics. Bioinformatics, 20, 735-741.
-
(2004)
Bioinformatics
, vol.20
, pp. 735-741
-
-
Yang, Z.R.1
Chou, K.C.2
-
17
-
-
3242877807
-
ELSPred:SVM based prediction of subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLAST
-
Bhasin,M. and Raghava,G.P.S. (2004) ELSPred:SVM based prediction of subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLAST. Nucleic Acids Res., 32, W414-W419.
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Bhasin, M.1
Raghava, G.P.S.2
-
18
-
-
0033554601
-
A key driving force in determination of protein structural classes
-
Chou,K.C. (1999) A key driving force in determination of protein structural classes. Biochem. Biophys. Res. Commun., 264, 216-224.
-
(1999)
Biochem. Biophys. Res. Commun.
, vol.264
, pp. 216-224
-
-
Chou, K.C.1
-
19
-
-
0034843744
-
Support vector machine approach for protein subcellular localization prediction
-
Hua,S. and Sun,Z. (2001) Support vector machine approach for protein subcellular localization prediction. Bioinformatics, 17, 721-728.
-
(2001)
Bioinformatics
, vol.17
, pp. 721-728
-
-
Hua, S.1
Sun, Z.2
-
20
-
-
2542458612
-
Classification of nuclear receptors based on amino acid composition and dipeptide composition
-
Bhasin,M. and Raghava,G.P.S. (2004) Classification of nuclear receptors based on amino acid composition and dipeptide composition. J. Biol. Chem., 279, 23262-23266.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 23262-23266
-
-
Bhasin, M.1
Raghava, G.P.S.2
-
21
-
-
0002714543
-
Making large-Scale SVM Learning Practical
-
Scholkopf,B., Burges,C. and Smola,A. (eds.), MIT Press, Cambridge, Massachusetts, London, England
-
Joachims,T. (1999) Making large-Scale SVM Learning Practical. In Scholkopf,B., Burges,C. and Smola,A. (eds.), Advances in Kernel Methods Support Vector Learning. MIT Press, Cambridge, Massachusetts, London, England.
-
(1999)
Advances in Kernel Methods Support Vector Learning
-
-
Joachims, T.1
-
22
-
-
0033406884
-
Protein secondary structural content prediction
-
Liu,W. and Chou,K.C. (1999) Protein secondary structural content prediction. Protein Eng., 12, 1041-1050.
-
(1999)
Protein Eng.
, vol.12
, pp. 1041-1050
-
-
Liu, W.1
Chou, K.C.2
-
23
-
-
0035053818
-
Prediction of the subcellular location of prokaryotic proteins based on a new representation of the amino acid composition
-
Feng,Z.P. (2001) Prediction of the subcellular location of prokaryotic proteins based on a new representation of the amino acid composition. Biopolymers, 58, 491-499.
-
(2001)
Biopolymers
, vol.58
, pp. 491-499
-
-
Feng, Z.P.1
-
24
-
-
0042885957
-
Application of pseudo amino acid composition for predicting protein subcellular location: Stochastic signal processing approach
-
Pan,Y.X., Zhang,Z.Z., Guo,Z.M., Feng,G.Y., Huang,Z.D. and He,L. (2003) Application of pseudo amino acid composition for predicting protein subcellular location: Stochastic signal processing approach. J. Protein Chem., 22, 395-402.
-
(2003)
J. Protein Chem.
, vol.22
, pp. 395-402
-
-
Pan, Y.X.1
Zhang, Z.Z.2
Guo, Z.M.3
Feng, G.Y.4
Huang, Z.D.5
He, L.6
-
25
-
-
0032938624
-
Prediction of protein subcellular locations using Markov chain models
-
Yuan,Z. (1999) Prediction of protein subcellular locations using Markov chain models. FEBS Lett., 451, 23-26.
-
(1999)
FEBS Lett.
, vol.451
, pp. 23-26
-
-
Yuan, Z.1
-
26
-
-
54749084166
-
An intriguing controversy over protein structural class prediction
-
Zhou,G.P. (1998) An intriguing controversy over protein structural class prediction. J. Protein Chem., 17, 729-738.
-
(1998)
J. Protein Chem.
, vol.17
, pp. 729-738
-
-
Zhou, G.P.1
-
27
-
-
0035400226
-
Some insights into protein structural class prediction
-
Zhou,G.P. and Assa-Munt,N. (2001) Some insights into protein structural class prediction. Proteins, 44, 57-59.
-
(2001)
Proteins
, vol.44
, pp. 57-59
-
-
Zhou, G.P.1
Assa-Munt, N.2
-
28
-
-
0037233515
-
Subcellular location prediction of apoptosis proteins
-
Zhou,G.P. and Doctor,K. (2003) Subcellular location prediction of apoptosis proteins. Proteins, 50, 44-48.
-
(2003)
Proteins
, vol.50
, pp. 44-48
-
-
Zhou, G.P.1
Doctor, K.2
-
29
-
-
0029157083
-
Review: Prediction of protein structural classes
-
Chou,K.C. and Zhang,C.T. (1995) Review: Prediction of protein structural classes. Crit. Rev. Biochem. Mol. Biol., 30, 275-349.
-
(1995)
Crit. Rev. Biochem. Mol. Biol.
, vol.30
, pp. 275-349
-
-
Chou, K.C.1
Zhang, C.T.2
|