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Volumn 33, Issue SUPPL. 2, 2005, Pages

dnaMATE: A consensus melting temperature prediction server for short DNA sequences

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ANALYTICAL ERROR; ARTICLE; CALCULATION; CLIENT SERVER APPLICATION; COMPUTER PROGRAM; CONSENSUS SEQUENCE; CONTROLLED STUDY; DNA DENATURATION; DNA SEQUENCE; GENETIC ANALYSIS; INTERNET; MATHEMATICAL GENETICS; PREDICTION; PRIORITY JOURNAL; THERMODYNAMICS; CHEMISTRY; COMPUTER INTERFACE; METHODOLOGY; NUCLEIC ACID HYBRIDIZATION; TEMPERATURE; WEB BROWSER;

EID: 23144465810     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gki379     Document Type: Article
Times cited : (19)

References (9)
  • 1
    • 15944415071 scopus 로고    scopus 로고
    • Comparison of different melting temperature calculation methods for short DNA sequences
    • Panjkovich,A. and Melo,F. (2005) Comparison of different melting temperature calculation methods for short DNA sequences. Bioinformatics, 21, 711-722.
    • (2005) Bioinformatics , vol.21 , pp. 711-722
    • Panjkovich, A.1    Melo, F.2
  • 4
    • 1642380887 scopus 로고    scopus 로고
    • Effects of sodium ions on DNA duplex oligomers: Improved predictions of melting temperatures
    • Owczarzy,R., You,Y., Moreira,B.G., Manthey,J.A., Huang,L., Behlke,M.A. and Walder,J.A. (2004) Effects of sodium ions on DNA duplex oligomers: improved predictions of melting temperatures. Biochemistry, 43, 3537-3554.
    • (2004) Biochemistry , vol.43 , pp. 3537-3554
    • Owczarzy, R.1    You, Y.2    Moreira, B.G.3    Manthey, J.A.4    Huang, L.5    Behlke, M.A.6    Walder, J.A.7
  • 6
    • 0032539693 scopus 로고    scopus 로고
    • A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
    • SantaLucia,J.J. (1998) A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc. Natl Acad. Sci. USA, 95, 1460-1465.
    • (1998) Proc. Natl Acad. Sci. USA , vol.95 , pp. 1460-1465
    • SantaLucia, J.J.1
  • 7
    • 0029859713 scopus 로고    scopus 로고
    • Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes
    • Sugimoto,N., Nakano,S., Yoneyama,M. and Honda,K. (1996) Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes. Nucleic Acids Res., 24, 4501-4505.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 4501-4505
    • Sugimoto, N.1    Nakano, S.2    Yoneyama, M.3    Honda, K.4
  • 8
    • 0013822867 scopus 로고
    • Dependence of the melting temperature of DNA on salt concentration
    • Schildkraut,C. and Lifson,S. (1965) Dependence of the melting temperature of DNA on salt concentration. Biopolymers, 3, 195-208.
    • (1965) Biopolymers , vol.3 , pp. 195-208
    • Schildkraut, C.1    Lifson, S.2
  • 9
    • 0029968822 scopus 로고    scopus 로고
    • Improved nearest-neighbor parameters for predicting DNA duplex stability
    • SantaLucia,J.J., Allawi,H.T. and Seneviratne,P.A. (1996) Improved nearest-neighbor parameters for predicting DNA duplex stability. Biochemistry, 35, 3555-3562.
    • (1996) Biochemistry , vol.35 , pp. 3555-3562
    • SantaLucia, J.J.1    Allawi, H.T.2    Seneviratne, P.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.