Genetic variation at microsatellite loci in northern populations of the European flat oyster (Ostrea edulis)

Journal of the Marine Biological Association of the United Kingdom

Volumn 85, Issue 4, 2005, Pages 955-960

  Sobolewska, Halina ^a   Beaumont, Andy R ^a  

^a BANGOR UNIVERSITY   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BIVALVE; GENETIC VARIATION; HETEROZYGOSITY; POPULATION GENETICS; STOCK IDENTIFICATION;

EASTERN HEMISPHERE; EURASIA; EUROPE; WORLD;

OSTREA EDULIS; OSTREIDAE;

EID: 22944471737     PISSN: 00253154     EISSN: None     Source Type: Journal    
DOI: 10.1017/S002531540501194X     Document Type: Article

References (36)

1. Balloux, F. & Goudet, J., 2002. Statistical properties of population differentiation estimators under stepwise mutation in a finite island model. Molecular Ecology, 11, 771-783.
2. Beaumont, A.R. & Hoare, K., 2003. Biotechnology and genetics in fisheries and aquaculture. Oxford: Blackwell Science.
3. Beaumont, A.R., Mulcahy, M., Culloty, S., Cronin, M. & Hugh-Jones, D., 2002. Bonamia resistance in flat oysters: a European Union CRAFT study. Shellfish News, 14, 13-14.
4. Boudry, P., Collet, B., Cornette, F., Hervouet, V. & Bonhomme, F., 2002. High variance in reproductive success of the Pacific oyster (Crassostrea gigas Thunberg) revealed by microsatellite-based parentage analysis of multifactorial crosses. Aquaculture, 204, 283-296.
5. Bruford, M.W. & Wayne, R.K., 1993. Microsatellites and their application to population genetic studies. Current Opinion in Genetics and Development, 3, 939-943.
6. Carvalho, G.R. & Hauser, L., 1998. Advances in the molecular analysis of fish population structure. Italian Journal of Zoology, 65 (Supplement), 21-33.
7. Cockerham, C.C., 1973. Analyses of gene frequencies. Genetics, 74, 679-700.
8. Cornuet, J.M. & Luikart, G., 1996. Description and power analysis of two tests for detecting recent bottlenecks from allele frequency data. Genetics, 144, 2001-2014.
9. Gaffney, P.M., 1994. Heterosis and heterozygote deficiencies in marine bivalves: more light? In Genetics and evolution of aquatic organisms (ed. A.R. Beaumont) p. 146-153. London: Chapman & Hall.
10. Gaggiotti, O.E., Lange, O., Rassman, K. & Gliddon, C., 1999. A comparison of two indirect methods for estimating average levels of gene flow using microsatellite data. Molecular Ecology, 8, 1513-1519.
11. Goldstein, D.B., Ruiz Linares, A., Cavalli-Sforza, L.L. & Feldman, M.W., 1995. An evaluation of genetic distances for use with microsatellite loci. Genetics, 139, 463-471.
12. Goudet, J., 1995. FSTAT (version 1.2): a computer program to calculate F-statistics. Journal of Heredity, 86, 485-486.
13. Hedgecock, D. & Sly, F., 1990. Genetic drift and effective population sizes of hatchery propogated stocks of the Pacific oyster, Crassostrea gigas. Aquaculture, 88, 21-38.
14. Johannesson, K., Rodstrom, E.M. & Aase, H., 1989. Low genetic variation in Scandinavian populations of Ostrea edulis L - possible causes and implications. Journal of Experimental Marine Biology and Ecology, 128, 177-190.
15. Karl, S.A. & Avise, J.C., 1992. Balancing selection at allozyme loci in oysters: implications from nuclear RFLPs. Science, New York, 256, 100-102.
16. Launey, S., Ledu, C., Boudry, P., Bonhomme, F. & Naciri-Graven, Y., 2002. Geographic structure in the European flat oyster (Ostrea edulis L.) as revealed by microsatellite polymorphisms. Journal of Heredity, 93, 331-351.
17. MacHugh, D.E., Loftus, R.T., Cunningham, P. & Bradley, D.G., 1998. Genetic structure of seven European cattle breeds assessed using 20 microsatellite markers. Animal Genetics, 29, 333-340.
18. Magennis, B.A., Gosling, E. & Wilkins, N.P., 1983. Irish oyster populations : an historical and genetic study. Proceedings of the Royal Irish Academy, 83B, 291-299.
19. May, B. et al., 1995. GENES IN POPULATIONS, version 2. A computer program for analysis of genetic data. Cornell Laboratory for Ecological and Evolutionary Genetics.
20. McGoldrick, D.J., Hedgecock, D., English, L.J., Baoprasertkul, P. & Ward, R.D., 2000. The transmission of microsatellite alleles in Australian and North American stocks of the Pacific oyster (Crassostrea gigas): selection and null alleles. Journal of Shellfish Research, 19, 779-786.
21. Morgan, T.S., Rogers, A.D. & Iyengar, A., 2000. Novel microsatellite markers for the European oyster Ostrea edulis. Molecular Ecology, 9, 495-496.
22. Naciri, Y. et al., 1995. Identification and inheritance of (GA/ TC)n and (AC/GT)n repeats in the European flat oyster. Molecular Marine Biology and Biotechnology, 4, 83-87.
23. Nei, M., 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics, 89, 583-590.
24. Nei, M., Maruyama, T. & Chakraborty, R., 1975. The bottleneck effect and genetic variability in populations. Evolution, 29, 1-10.
25. Perez-Lezaun, A., Calafell, F., Mateu, E., Comas, D., Ruiz-Pacheco, R. & Bertranpetit, J., 1997. Microsatellite variation and the differentiation of modern humans. Human Genetics, 99, 1-7.
26. Raymond, M. & Rousett, F., 1995. GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. Journal of Heredity, 86, 348-249.
27. Saavedra, C., 1997. Low effective sizes in hatchery populations of the European oyster (Ostrea edulis): implications for the management of genetic resources. Journal of Shellfish Research, 16, 441-446.
28. Saavedra, C., Zapata, C. & Alvarez, G., 1995. Geographical patterns of variability at allozyme loci in the European flat oyster, Ostrea edulis. Marine Biology, 122, 95-104.
29. Sambrook, J., Fritsch, E.F. & Maniatis, T., 1989. Molecular cloning: a laboratory manual. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
30. Sobolewska, H., Beaumont, A.R. & Hamilton, A., 2001. Dinucleotide microsatellites isolated from the European flat oyster, Ostrea edulis. Molecular Ecology Notes, 1, 79-80.
31. Takezaki, N. & Nei, M., 1996. Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA. Genetics, 144, 389-399.
32. Wilding, C.S., Beaumont, A.R. & Latchford, J.W., 1997. Mitochondrial DNA variation in the scallop Pecten maximus (L.), assessed by a PCR-RFLP method. Heredity, 79, 178-189.
33. Weir, B.S. & Cockerham, C.C., 1984. Estimating F-statistics for the analysis of population structure. Evolution, 38, 1358-1370.
34. Wright, S., 1965. The interpretation of population structure by F-statistics with special regard to systems of mating. Evolution, 19, 395-420.
35. Zane, L. Bargelloni, L. & Paternello, T., 2002. Strategies for microsatellite isolation: a review. Molecular Ecology, 11, 1-16.
36. Zouros, E. & Foltz, D.W., 1984. Possible explanations of heterozygote deficiency in bivalve mollusks. Malacologia, 25, 583-591.