Mapping of QTLs conferring extremely early heading in rice (Oryza sativa L.)

Theoretical and Applied Genetics

Volumn 111, Issue 2, 2005, Pages 393-398

  Fujino, Kenji ^a   Sekiguchi, Hiroshi ^a  

^a Hokkaido Green Bio Institute   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CULTIVATION; GENES; MAPPING;

EPISTATIC INTERACTIONS; MOLECULAR MARKERS;

CROPS;

MICROSATELLITE DNA; PRIMER DNA;

ARTICLE; BIOLOGICAL MODEL; COMPARATIVE STUDY; CROSS BREEDING; GENETIC EPISTASIS; GENETICS; GROWTH, DEVELOPMENT AND AGING; JAPAN; PHENOTYPE; QUANTITATIVE TRAIT LOCUS; RICE;

CROSSES, GENETIC; DNA PRIMERS; EPISTASIS, GENETIC; JAPAN; MICROSATELLITE REPEATS; MODELS, GENETIC; ORYZA SATIVA; PHENOTYPE; QUANTITATIVE TRAIT LOCI;

ADAPTATION; ALLELES; CULTIVATION; FARM CROPS; GENES; SEPARATION;

ORYZA SATIVA;

EID: 22844450093     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-005-2035-3     Document Type: Article

References (25)

1. Fujino K (2003) Photoperiod sensitivity gene controlling heading date in rice cultivars in the northernmost region of Japan. Euphytica 131:97-103
2. Fujino K, Sekiguchi H (2005) Identification of QTLs conferring genetic variation for heading date among rice varieties at the northern-limit of rice cultivation. Breed Sci (in press)
3. Fujino K, Sekiguchi H, Sato T, Kiuchi H, Nonoue Y, Takeuchi Y, Ando T, Lin SY, Yano M (2004) Mapping of quantitative trait loci controlling low-temperature germinability in rice (Oryza sativa L.). Theor Appl Genet 108:794-799
4. 2 population. Genetics 148:479-494
5. Ichitani K, Okumoto Y, Tanisaka T (1998a) Genetic analyses of low photoperiod sensitivity of rice cultivars from the northernmost regions of Japan. Plant Breed 117:543-547
6. Ichitani K, Okumoto Y, Tanisaka T (1998b) Genetic analysis of the rice cultivar Kasalath with special reference to two photoperiod sensitivity loci, E1 and Se-1. Breed Sci 48:51-57
7. Lin SY, Sasaki T, Yano M (1998) Mapping quantitative trait loci controlling seed dormancy and heading date in rice, Oryza sativa L., using backcross inbred lines. Theor Appl Genet 96:997-1003
8. Lin HX, Yamamoto T, Sasaki T, Yano M (2000) Characterization and detection of epistatic interactions of three QTLs, Hd1,Hd2 and Hd3, controlling heading date in rice using nearly isogenic lines. Theor Appl Genet 101:1021-1028
9. Lin HX, Ashikari M, Yamanouchi U, Sasaki T, Yano M (2002) Identification and characterization of a quantitative trait locus, Hd9, controlling heading date in rice. Breed Sci 52:35-41
10. Lin HX, Liang ZW, Sasaki T, Yano M (2003) Fine mapping and characterization of quantitative trait loci Hd4 and Hd5 controlling heading date in rice. Breed Sci 53:51-59
11. Lu C, Shen L, Tan Z, Xu Y, He P, Chen Y, Zhu L (1996) Comparative mapping of QTLs for agronomic traits of rice across environments using a doubled haploid population. Theor Appl Genet 93:1211-1217
12. McCouch SR, Teytelman L, Xu Y, Lobos KB, Clare K, Walton M, Fu B, Maghirang R, Li Z, Xing Y, Zhang Q, Kono I, Yano M, Fjellstrom R, DeClerck G, Schneider D, Cartinhour S, Ware D, Stein L (2002) Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.). DNA Res 9:199-207
13. Murray MG, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res 8:4321-4325
14. Okumoto Y, Tanisaka T, Yamagata H (1991) Heading-time genes of the rice varieties grown in South-West-Warm region in Japan. Jpn J Breed 41:135-152
15. Okumoto Y, Tanisaka T, Yamagata H (1992a) Heading-time genes of the rice varieties grown in the Tohoku-Hokuriku region in Japan. Jpn J Breed 42:121-135
16. Okumoto Y, Yoshimura A, Tanisaka T, Yamagata H (1992b) Analysis of a rice variety Taichung 65 and its isogenic early heading lines for late-heading genes E1,E2 and E3. Jpn J Breed 42:415-429
17. Okumoto Y, Ichitani K, Inoue H, Tanisaka T (1996) Photoperiod insensitivity gene essential to the varieties grown in the northern limit region of paddy rice (Oryza sativa L.) cultivation. Euphytica 92:63-66
18. Takeuchi Y, Hayasaka H, Chiba B, Tanaka I, Shimano T, Yamagishi M, Nagano K, Sasaki T, Yano M (2001) Mapping quantitative trait loci controlling cool-temperature tolerance at booting stage in temperate japonica rice. Breed Sci 51:191-197
19. Yamamoto T, Kuboki Y, Lin SY, Sasaki T, Yano M (1998) Fine mapping of quantitative trait loci Hd-1,Hd-2 and Hd-3, controlling heading date of rice, as single Mendelian factors. Theor Appl Genet 97:37-44
20. Yamamoto T, Lin HX, Sasaki T, Yano M (2000) Identification of heading date quantitative trait locus Hd6 and characterization of its epistatic interactions with Hd2 in rice. Genetics 154:885-891
21. Yano M (2001) Genetic and molecular dissection of naturally occurring variation. Curr Opin Plant Biol 4:130-135
22. Yano M, Sasaki T (1997) Genetic and Molecular dissection of quantitative traits in rice. Plant Mol Biol 35:145-153
23. Yano M, Harushima Y, Nagamura Y, Kurata N, Minobe Y, Sasaki T (1997) Identification of quantitative trait loci controlling heading date in rice using a high-density linkage map. Theor Appl Genet 95:1025-1032
24. Yano M, Katayose Y, Ashikari M, Yamanouchi U, Monna L, Fuse T, Baba T, Yamamoto K, Umehara Y, Naganura Y, Sasaki T (2000) Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene constance. Plant Cell 12:2473-2484
25. Yano M, Kojima S, Takahashi Y, Lin HX, Sasaki T (2001) Genetic control of flowering time in rice, a short-day plant. Plant Physiol 127:1425-1429