메뉴 건너뛰기




Volumn 66, Issue 2, 2005, Pages 99-106

HLA-DQB1 sequencing-based typing using newly identified conserved nucleotide sequences in introns 1 and 2

Author keywords

Alu element; DQB1; Evolution; HLA; Intron; Polymorphism; Sequencing based typing

Indexed keywords

HLA DQ1 ANTIGEN;

EID: 22644432663     PISSN: 00012815     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1399-0039.2005.00445.x     Document Type: Article
Times cited : (26)

References (18)
  • 1
    • 1842844011 scopus 로고    scopus 로고
    • Sequencing protocols for detection of HLA class I polymorphism
    • Dunn PPJ, Cox ST, Little AM. Sequencing protocols for detection of HLA class I polymorphism. Methods Mol Biol 2003: 210: 191-222.
    • (2003) Methods Mol Biol , vol.210 , pp. 191-222
    • Dunn, P.P.J.1    Cox, S.T.2    Little, A.M.3
  • 2
    • 0642318051 scopus 로고    scopus 로고
    • DNA sequencing as a tissue typing tool
    • Goulden N, Steward C, eds. Totowa: Humana Press
    • Dunn PPJ, Day S, Williams S, Bendukidze N. DNA sequencing as a tissue typing tool. In: Goulden N, Steward C, eds. Methods Mol Medical. Totowa: Humana Press, 2004: 91: 233-46.
    • (2004) Methods Mol Medical , vol.91 , pp. 233-246
    • Dunn, P.P.J.1    Day, S.2    Williams, S.3    Bendukidze, N.4
  • 3
    • 2942585768 scopus 로고    scopus 로고
    • Nomenclature for factors of the HLA system, 2002
    • Marsh SG, Albert ED, Bodmer WF et al. Nomenclature for factors of the HLA system, 2002. Tissue Antigens 2002: 60: 407-64.
    • (2002) Tissue Antigens , vol.60 , pp. 407-464
    • Marsh, S.G.1    Albert, E.D.2    Bodmer, W.F.3
  • 4
  • 6
    • 0028885314 scopus 로고
    • Locus-specific amplification of HLA class I genes from genomic DNA. Locus-specific sequences in the first and third introns of HLA-A-B, and - C alleles
    • Cereb N, Maye P, Lee S, Kong Y, Yang SY. Locus-specific amplification of HLA class I genes from genomic DNA. locus-specific sequences in the first and third introns of HLA-A-B, and - C alleles. Tissue Antigens 1995: 45: 1-11.
    • (1995) Tissue Antigens , vol.45 , pp. 1-11
    • Cereb, N.1    Maye, P.2    Lee, S.3    Kong, Y.4    Yang, S.Y.5
  • 7
    • 0030997004 scopus 로고    scopus 로고
    • Dimorphic primers derived from intron 1 for use in the molecular typing of HLA-B alleles
    • Cereb N, Yang SY. Dimorphic primers derived from intron 1 for use in the molecular typing of HLA-B alleles. Tissue Antigens 1997: 50: 74-6.
    • (1997) Tissue Antigens , vol.50 , pp. 74-76
    • Cereb, N.1    Yang, S.Y.2
  • 8
    • 0032436160 scopus 로고    scopus 로고
    • Identification of an HLA-C variant allele, Cw*0805, by sequencing based typing
    • Dunn PPJ, Day S, Harvey J, Fuggle SV, Ross J. Identification of an HLA-C variant allele, Cw*0805, by sequencing based typing. Tissue Antigens 1998: 52: 587-9.
    • (1998) Tissue Antigens , vol.52 , pp. 587-589
    • Dunn, P.P.J.1    Day, S.2    Harvey, J.3    Fuggle, S.V.4    Ross, J.5
  • 9
    • 0032999844 scopus 로고    scopus 로고
    • Identification of an HLA-A11 serological variant and its characterization by sequencing based typing
    • Morrell G, Whalley J, Stewart A et al. Identification of an HLA-A11 serological variant and its characterization by sequencing based typing. Tissue Antigens 1999: 53: 591-4.
    • (1999) Tissue Antigens , vol.53 , pp. 591-594
    • Morrell, G.1    Whalley, J.2    Stewart, A.3
  • 10
    • 0033978471 scopus 로고    scopus 로고
    • Identification of an HLA-B7 serological variant and its characterization by sequencing based typing
    • Dunn PPJ, Carter V, Dunn A, Fuggle SV, Ross J, Cavanagh G. Identification of an HLA-B7 serological variant and its characterization by sequencing based typing. Tissue Antigens 2000: 55: 71-3.
    • (2000) Tissue Antigens , vol.55 , pp. 71-73
    • Dunn, P.P.J.1    Carter, V.2    Dunn, A.3    Fuggle, S.V.4    Ross, J.5    Cavanagh, G.6
  • 11
    • 0000794861 scopus 로고    scopus 로고
    • Sequencing of HLA class II genes based on the conserved diversity of the non-coding regions: Sequencing based typing of HLA-DRB genes
    • Kotsch K, Wehling J, Blasczyk R. Sequencing of HLA class II genes based on the conserved diversity of the non-coding regions: sequencing based typing of HLA-DRB genes. Tissue Antigens 1999: 53: 486-97.
    • (1999) Tissue Antigens , vol.53 , pp. 486-497
    • Kotsch, K.1    Wehling, J.2    Blasczyk, R.3
  • 12
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignments through sequence weighting, position-specific gap penalties and weight matrix choice
    • Higgins D, Thompson J, Gibson T, Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignments through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994: 22: 4673-80.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Higgins, D.1    Thompson, J.2    Gibson, T.3    Thompson, J.D.4    Higgins, D.G.5    Gibson, T.J.6
  • 13
    • 0037302988 scopus 로고    scopus 로고
    • Extensive polymorphism and different evolutionary patterns of intron 2 were identified in the HLA-DQB1 gene
    • Fu Y, Liu Z, Lin J et al. Extensive polymorphism and different evolutionary patterns of intron 2 were identified in the HLA-DQB1 gene. Immunogenetics 2003: 54: 761-6.
    • (2003) Immunogenetics , vol.54 , pp. 761-766
    • Fu, Y.1    Liu, Z.2    Lin, J.3
  • 14
    • 0032508672 scopus 로고    scopus 로고
    • Large-scale sequence comparisons reveal unusually high levels of variation in the HLA-DQB1 locus in the class II region of the human MHC
    • Horton R, Niblett D, Milne S et al. Large-scale sequence comparisons reveal unusually high levels of variation in the HLA-DQB1 locus in the class II region of the human MHC. J Mol Biol 1998: 282: 71-97.
    • (1998) J Mol Biol , vol.282 , pp. 71-97
    • Horton, R.1    Niblett, D.2    Milne, S.3
  • 15
    • 0036737222 scopus 로고    scopus 로고
    • Active alu element 'A-Tails': Size does matter
    • Roy-Engel AM, Salem AH, Oyeniran OO et al. Active alu element 'A-Tails': size does matter. Genome Res 2002: 12: 1333-44.
    • (2002) Genome Res , vol.12 , pp. 1333-1344
    • Roy-Engel, A.M.1    Salem, A.H.2    Oyeniran, O.O.3
  • 16
    • 0030479536 scopus 로고    scopus 로고
    • The origin of interspersed repeats in the human genome
    • Smit AF. The origin of interspersed repeats in the human genome. Curr Opin Genet Dev 1996: 6: 743-8.
    • (1996) Curr Opin Genet Dev , vol.6 , pp. 743-748
    • Smit, A.F.1
  • 17
    • 0033066689 scopus 로고    scopus 로고
    • Intronic sequence motifs of HLA-DQB1 are shared between humans, apes and old world monkeys, but a retroviral element (DQLTR3) is human specific
    • Donner H, Tönjes RR, Bontrop RE, Kurth R, Usadel KH, Badenhoop K. Intronic sequence motifs of HLA-DQB1 are shared between humans, apes and old world monkeys, but a retroviral element (DQLTR3) is human specific. Tissue Antigens 1999: 53: 551-8.
    • (1999) Tissue Antigens , vol.53 , pp. 551-558
    • Donner, H.1    Tönjes, R.R.2    Bontrop, R.E.3    Kurth, R.4    Usadel, K.H.5    Badenhoop, K.6
  • 18
    • 0033811473 scopus 로고    scopus 로고
    • MHC diversity in Caucasians, investigated using highly heterogeneous noncoding sequence motifs at the DQB1 locus including a retroviral long terminal repeat element, and its comparison to nonhuman primate homologues
    • Donner H, Tönjes RR, Bontrop RE et al. MHC diversity in Caucasians, investigated using highly heterogeneous noncoding sequence motifs at the DQB1 locus including a retroviral long terminal repeat element, and its comparison to nonhuman primate homologues. Immunogenetics 2000: 51: 898-904.
    • (2000) Immunogenetics , vol.51 , pp. 898-904
    • Donner, H.1    Tönjes, R.R.2    Bontrop, R.E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.