메뉴 건너뛰기




Volumn 55, Issue 4, 2005, Pages 1429-1433

Methylobacterium variabile sp. nov., a methylotrophic bacterium isolated from an aquatic environment

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; DRINKING WATER; FRESH WATER; RNA 16S;

EID: 22544459095     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.63597-0     Document Type: Article
Times cited : (39)

References (28)
  • 1
    • 0000252611 scopus 로고
    • Reclassification of bacteria of the genus Protomonas Urakami and Komagata 1984 in the genus Methylobacterium (Patt, Cole, and Hanson) emend. Green and Bousfield 1983
    • Bousfield, I. J. & Green, P. N. (1985). Reclassification of bacteria of the genus Protomonas Urakami and Komagata 1984 in the genus Methylobacterium (Patt, Cole, and Hanson) emend. Green and Bousfield 1983. Int J Syst Bacteriol 35, 209.
    • (1985) Int. J. Syst. Bacteriol. , vol.35 , pp. 209
    • Bousfield, I.J.1    Green, P.N.2
  • 2
    • 9744260253 scopus 로고    scopus 로고
    • Methane utilization by Methylobacterium species: New evidence but still no proof for an old controversy
    • Dedysh, S. N., Dunfield, P. F. & Trotsenko, Y. A. (2004). Methane utilization by Methylobacterium species: new evidence but still no proof for an old controversy. Int J Syst Evol Microbiol 54, 1919-1920.
    • (2004) Int. J. Syst. Evol. Microbiol. , vol.54 , pp. 1919-1920
    • Dedysh, S.N.1    Dunfield, P.F.2    Trotsenko, Y.A.3
  • 3
    • 0014913051 scopus 로고
    • Evaluation of membrane filter methods for DNA-DNA hybridization
    • De Ley, J. & Tijtgat, R. (1970). Evaluation of membrane filter methods for DNA-DNA hybridization. Antonie van Leeuwenhoek 36, 461-474.
    • (1970) Antonie Van Leeuwenhoek , vol.36 , pp. 461-474
    • De Ley, J.1    Tijtgat, R.2
  • 4
    • 0031754643 scopus 로고    scopus 로고
    • Methylopila capsulata gen. nov., sp. nov., a novel non-pigmented aerobic facultatively methylotrophic bacterium
    • Doronina, N. V., Trotsenko, Y. A., Krausova, V. I., Boulygina, E. S. & Tourova, T. P. (1998). Methylopila capsulata gen. nov., sp. nov., a novel non-pigmented aerobic facultatively methylotrophic bacterium. Int J Syst Bacteriol 48, 1313-1321.
    • (1998) Int. J. Syst. Bacteriol. , vol.48 , pp. 1313-1321
    • Doronina, N.V.1    Trotsenko, Y.A.2    Krausova, V.I.3    Boulygina, E.S.4    Tourova, T.P.5
  • 5
    • 0033923247 scopus 로고    scopus 로고
    • Methylopila helvetica sp. nov. and Methylobacterium dichloromethanicum sp. nov. - Novel aerobic facultatively methylotrophic bacteria utilizing dichloromethane
    • Doronina, N. V., Trotsenko, Y. A., Tourova, T. P., Kuznetsov, B. B. & Leisinger, T. (2000). Methylopila helvetica sp. nov. and Methylobacterium dichloromethanicum sp. nov. - novel aerobic facultatively methylotrophic bacteria utilizing dichloromethane. Syst Appl Microbiol 23, 210-218.
    • (2000) Syst. Appl. Microbiol. , vol.23 , pp. 210-218
    • Doronina, N.V.1    Trotsenko, Y.A.2    Tourova, T.P.3    Kuznetsov, B.B.4    Leisinger, T.5
  • 6
    • 0035989437 scopus 로고    scopus 로고
    • Methylobacterium suomiense sp. nov. and Methylobacterium lusitanum sp. nov., aerobic, pink-pigmented, facultatively methylotrophic bacteria
    • Doronina, N. V., Trotsenko, Y. A., Kuznetsov, B. B., Tourova, T. P. & Salkinoja-Salonen, M. S. (2002). Methylobacterium suomiense sp. nov. and Methylobacterium lusitanum sp. nov., aerobic, pink-pigmented, facultatively methylotrophic bacteria. Int J Syst Evol Microbiol 52, 773-776.
    • (2002) Int. J. Syst. Evol. Microbiol. , vol.52 , pp. 773-776
    • Doronina, N.V.1    Trotsenko, Y.A.2    Kuznetsov, B.B.3    Tourova, T.P.4    Salkinoja-Salonen, M.S.5
  • 7
    • 13244298470 scopus 로고    scopus 로고
    • Methylobacterium hispanicum sp. nov. and Methylobacterium aquaticum sp. nov., isolated from drinking water
    • Gallego, V., García, M. T. & Ventosa, A. (2005). Methylobacterium hispanicum sp. nov. and Methylobacterium aquaticum sp. nov., isolated from drinking water. Int J Syst Evol Microbiol 55, 281-287.
    • (2005) Int. J. Syst. Evol. Microbiol. , vol.55 , pp. 281-287
    • Gallego, V.1    García, M.T.2    Ventosa, A.3
  • 8
    • 9744262716 scopus 로고    scopus 로고
    • The genus Methylobacterium
    • 3rd edn, release 3.0, 21 May 1999. Edited by M. Dworkin et al. New York: Springer-Verlag
    • Green, P. N. (1999). The genus Methylobacterium. In The Prokaryotes: an Evolving Electronic Resource for the Microbiological Community, 3rd edn, release 3.0, 21 May 1999. Edited by M. Dworkin et al. New York: Springer-Verlag (http://link.springer-ny.com/link/service/books/10125/).
    • (1999) The Prokaryotes: An Evolving Electronic Resource for the Microbiological Community
    • Green, P.N.1
  • 9
    • 22544463033 scopus 로고
    • The taxonomy of pink-pigmented facultatively methylotrophic bacteria
    • Edited by H. Dalton. London: Heyden & Son
    • 1-Compounds, pp. 285-293. Edited by H. Dalton. London: Heyden & Son.
    • (1981) 1-Compounds , pp. 285-293
    • Green, P.N.1    Bousfield, I.J.2
  • 10
    • 0001236688 scopus 로고
    • Emendation of Methylobacterium Patt, Cole, and Hanson 1976; Methylobacterium rhodinum (Heumann 1962) comb. nov. corrig.; Methylobacterium radiotolerans (Ito and Iizuka 1971) comb. nov., corrig.; and Methylobacterium mesophilicum (Austin and Goodfellow 1979) comb. nov.
    • Green, P. N. & Bousfield, I. J. (1983). Emendation of Methylobacterium Patt, Cole, and Hanson 1976; Methylobacterium rhodinum (Heumann 1962) comb. nov. corrig.; Methylobacterium radiotolerans (Ito and Iizuka 1971) comb. nov., corrig.; and Methylobacterium mesophilicum (Austin and Goodfellow 1979) comb. nov. Int J Syst Bacteriol 33, 875-877.
    • (1983) Int. J. Syst. Bacteriol. , vol.33 , pp. 875-877
    • Green, P.N.1    Bousfield, I.J.2
  • 11
    • 0023840223 scopus 로고
    • Three new Methylobacterium species: M. rhodesianum sp. nov., M. zatmanii sp. nov., and M. fujisawaense sp. nov.
    • Green, P. N., Bousfield, I. J. & Hood, D. (1988). Three new Methylobacterium species: M. rhodesianum sp. nov., M. zatmanii sp. nov., and M. fujisawaense sp. nov. Int J Syst Bacteriol 38, 124-127.
    • (1988) Int. J. Syst. Bacteriol. , vol.38 , pp. 124-127
    • Green, P.N.1    Bousfield, I.J.2    Hood, D.3
  • 12
    • 0029010490 scopus 로고
    • Phenotypic and genetic diversity of chlorine-resistant Methylobacterium strains isolated from various environments
    • Hiraishi, A., Furuhata, K., Matsumoto, A., Koike, K. A., Fukuyama, M. & Tabuchi, K. (1995). Phenotypic and genetic diversity of chlorine-resistant Methylobacterium strains isolated from various environments. Appl Environ Microbiol 61, 2099-2107.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 2099-2107
    • Hiraishi, A.1    Furuhata, K.2    Matsumoto, A.3    Koike, K.A.4    Fukuyama, M.5    Tabuchi, K.6
  • 13
    • 0023136681 scopus 로고
    • DNA:DNA hybridization studies on the pink-pigmented facultative methylotrophs
    • Hood, D. W., Dow, C. S. & Green, P. N. (1987). DNA:DNA hybridization studies on the pink-pigmented facultative methylotrophs. J Gen Microbiol 38, 709-720.
    • (1987) J. Gen. Microbiol. , vol.38 , pp. 709-720
    • Hood, D.W.1    Dow, C.S.2    Green, P.N.3
  • 14
    • 0000225313 scopus 로고
    • Similarity analysis of DNAs
    • Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
    • Johnson, J. L. (1994). Similarity analysis of DNAs. In Methods for General and Molecular Bacteriology, pp. 655-681. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
    • (1994) Methods for General and Molecular Bacteriology , pp. 655-681
    • Johnson, J.L.1
  • 15
    • 9744239475 scopus 로고    scopus 로고
    • Methylobacterium nodulans sp. nov., for a group of aerobic, facultatively methylotrophic, legume root-nodule-forming and nitrogen-fixing bacteria
    • Jourand, P., Giraud, E., Béna, G., Sy, A., Willems, A., Gillis, M., Dreyfus, B. & de Lajudie, P. (2004). Methylobacterium nodulans sp. nov., for a group of aerobic, facultatively methylotrophic, legume root-nodule-forming and nitrogen-fixing bacteria. Int J Syst Evol Microbiol 54, 2269-2273.
    • (2004) Int. J. Syst. Evol. Microbiol. , vol.54 , pp. 2269-2273
    • Jourand, P.1    Giraud, E.2    Béna, G.3    Sy, A.4    Willems, A.5    Gillis, M.6    Dreyfus, B.7    de Lajudie, P.8
  • 16
    • 0003449416 scopus 로고    scopus 로고
    • ARB - A software environment for sequence data
    • Ludwig, W. & Strunk, O. (1996). ARB - a software environment for sequence data (http://www.mikro.biologie.tu-muenchen.de).
    • (1996)
    • Ludwig, W.1    Strunk, O.2
  • 17
    • 85010439719 scopus 로고
    • A procedure for the isolation of deoxyribonucleic acid from micro-organisms
    • Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J Mol Bioi 3, 208-218.
    • (1961) J. Mol. Bioi. , vol.3 , pp. 208-218
    • Marmur, J.1
  • 18
    • 73649209034 scopus 로고
    • Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature
    • Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
    • (1962) J. Mol. Biol. , vol.5 , pp. 109-118
    • Marmur, J.1    Doty, P.2
  • 19
    • 0035155059 scopus 로고    scopus 로고
    • Hyphomicrobium chloromethanicum sp. nov. and Methylobacterium chloromethanicum sp. nov., chloromethane-utilizing bacteria isolated from a polluted environment
    • McDonald, I. R., Droning, N. V., Trotsenko, Y. A., McAnulla, C. & Murrell, J. C. (2001). Hyphomicrobium chloromethanicum sp. nov. and Methylobacterium chloromethanicum sp. nov., chloromethane-utilizing bacteria isolated from a polluted environment. Int J Syst Evol Microbiol 51, 119-122.
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 119-122
    • McDonald, I.R.1    Droning, N.V.2    Trotsenko, Y.A.3    McAnulla, C.4    Murrell, J.C.5
  • 20
    • 0028874653 scopus 로고
    • Phylogenetic inferences and taxonomic consequences of 16S ribosomal DNA sequence comparison of Chromohalobacter marismortui, Volcaniella eurihalina, and Deleya salina, and reclassification of V. eurihalina as Halomonas eurihalina comb. nov.
    • Mellado, E., Moore, E. R. B., Nieto, J. J. & Ventosa, A. (1995). Phylogenetic inferences and taxonomic consequences of 16S ribosomal DNA sequence comparison of Chromohalobacter marismortui, Volcaniella eurihalina, and Deleya salina, and reclassification of V. eurihalina as Halomonas eurihalina comb. nov. Int J Syst Bacteriol 45, 712-716.
    • (1995) Int. J. Syst. Bacteriol. , vol.45 , pp. 712-716
    • Mellado, E.1    Moore, E.R.B.2    Nieto, J.J.3    Ventosa, A.4
  • 22
    • 0002161129 scopus 로고
    • The estimation of base compositions, base pairing and genome size of bacterial deoxyribonucleic acids
    • 2nd edn, Edited by F. A. Skinner & D. W. Lovelock. London: Academic Press
    • Owen, R. J. & Hill, L. R. (1979). The estimation of base compositions, base pairing and genome size of bacterial deoxyribonucleic acids. In Identification Methods for Microbiologists, 2nd edn, pp. 217-296. Edited by F. A. Skinner & D. W. Lovelock. London: Academic Press.
    • (1979) Identification Methods for Microbiologists , pp. 217-296
    • Owen, R.J.1    Hill, L.R.2
  • 23
    • 0001300695 scopus 로고
    • Methylobacterium, a new genus of facultatively methylotrophic bacteria
    • Patt, T. E., Cole, G. C. & Hanson, R. S. (1976). Methylobacterium, a new genus of facultatively methylotrophic bacteria. Int J Syst Bacteriol 26, 226-229.
    • (1976) Int. J. Syst. Bacteriol. , vol.26 , pp. 226-229
    • Patt, T.E.1    Cole, G.C.2    Hanson, R.S.3
  • 24
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 25
    • 0027249216 scopus 로고
    • Further studies of the genus Methylobacterium and description of Methylobacterium aminovorans sp. nov.
    • Urakami, T., Araki, H., Suzuki, K. I. & Komogata, K. (1993). Further studies of the genus Methylobacterium and description of Methylobacterium aminovorans sp. nov. Int J Syst Bacteriol 43, 504-513.
    • (1993) Int. J. Syst. Bacteriol. , vol.43 , pp. 504-513
    • Urakami, T.1    Araki, H.2    Suzuki, K.I.3    Komogata, K.4
  • 26
    • 4344690052 scopus 로고    scopus 로고
    • Methylobacterium populi sp. nov., a novel aerobic, pink-pigmented, facultatively methylotrophic, methane-utilizing bacterium isolated from poplar trees (Populus deltoides x nigra DN34)
    • Van Aken, B., Peres, C. M., Lafferty Doty, S., Yoon, J. M. & Schnoor, J. L. (2004). Methylobacterium populi sp. nov., a novel aerobic, pink-pigmented, facultatively methylotrophic, methane-utilizing bacterium isolated from poplar trees (Populus deltoides x nigra DN34).Int J Syst Evol Microbiol 54, 1191-1196.
    • (2004) Int. J. Syst. Evol. Microbiol. , vol.54 , pp. 1191-1196
    • Van Aken, B.1    Peres, C.M.2    Lafferty Doty, S.3    Yoon, J.M.4    Schnoor, J.L.5
  • 27
    • 0001279038 scopus 로고
    • Preparation of genomic DNA from bacteria
    • Edited by F. M. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith & K. Struhl. New York: Wiley
    • Wilson, K. (1987). Preparation of genomic DNA from bacteria. In Current Protocols in Molecular Biology, pp. 2.4.1-2.4.2. Edited by F. M. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith & K. Struhl. New York: Wiley.
    • (1987) Current Protocols in Molecular Biology
    • Wilson, K.1
  • 28
    • 0031934387 scopus 로고    scopus 로고
    • A novel pink-pigmented facultative methylotroph, Methylobacterium thiocyanatum sp. nov., capable of growth on thiocyanate or cyanate as sole nitrogen sources
    • Wood, A. P., Kelly, D. P., McDonald, I. R., Jordan, S. L., Morgan, T. D., Khan, S., Murrell, J. C. & Borodina, E. (1998). A novel pink-pigmented facultative methylotroph, Methylobacterium thiocyanatum sp. nov., capable of growth on thiocyanate or cyanate as sole nitrogen sources. Arch Microbiol 169, 148-158.
    • (1998) Arch. Microbiol. , vol.169 , pp. 148-158
    • Wood, A.P.1    Kelly, D.P.2    McDonald, I.R.3    Jordan, S.L.4    Morgan, T.D.5    Khan, S.6    Murrell, J.C.7    Borodina, E.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.