Light as the most important factor of evolution: Some molecular aspects

Journal of Evolutionary Biochemistry and Physiology

Volumn 33, Issue 4-5, 1997, Pages 492-504

  Etingof, R N ^a  

^a SECHENOV INSTITUTE OF EVOLUTIONARY PHYSIOLOGY AND BIOCHEMISTRY   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 22444455066     PISSN: 00220930     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review

References (57)

1. Vavilov, S.I., Glaz i solntse (The Eye and the Sun), Moscow: Nauka, 1976.
2. Wolken, J.J., Photoprocess, Photoreceptors, and Evolution, New York, San Francisco, London: Acad., 1975.
3. Arushanian, A.V. and Ovanesov, K.V., The Pineal Gland in the System of Optic Perception, Usp. Fiziol. Nauk, 1995, vol. 26, no. 3, pp. 25-40.
4. Korf, H.N., The Pineal Organ as a Component of the Biological Clock. Phylogenetic and Ontogenetic Consideration, Ann. New York Acad. Sci., 1994, vol. 719, pp. 13-42.
5. Shedpure, M. and Pati, A.K., The Pineal Gland. Structural and Functional Diversity, J. Exp. Biol., 1995, vol. 33, no. 9, pp. 625-640.
6. Meyer, T.E., Fitch, J.C., Bartch, R.G., et al., Soluble Cytochromes and a Photoactive Yellow Protein Isolated from the Moderatory Halophilic Purple Phototrophic Bacterium Rhodospirillum salexigens, Biochim. Biophys. Acta, 1990, vol. 1016, no. 3, pp. 364-370.
7. Hoff, W.D., Dux, P., Hard, K., et al., Thiol-Ester-Linked p-Coumaric Acid as a New Photoactive Prosthetic Group in a Protein with Rhodopsin Like Photochemistry, Biochemistry, 1994, vol. 33, no. 47, pp. 13959-13952.
8. Borgstahl, E.O., De Wight, P., Williams, R., et al., A Structure of Photoactive Yellow Protein, a Cytosolic Photoreceptor: Unusual Fold, Active Site and Chromophore, Biochemistry, 1995, vol. 34, no. 19, pp. 6228-6287.
9. Ulrich, K., Genick, Devanthan, S., Meyer, T.E., et al., Active Site Mutants Implicate Key Residues for Control of Color and Light Cycle Kinetics of Photoactive Yellow Protein, Biochemistry, 1997, vol. 36, no. 1, pp. 8-14.
10. Kim, Hgun, Rhea, Jac Seong, Hah, Wook J., et al., Structure and Function of the Photoreceptor Stentorius in Stentor Coerulues. Partial Characterization of the Photoreceptor Organelle and Stentorins, Biochim. Biophys. Acta, 1990, vol. 1040, no. 1, pp. 702-706.
11. Song, Pill Soon, Structure and Function of the Ciliate Photoreceptors, Proc. of 6th Congress of the European Society for Photobiology, University of Cambridge, UK, 1995, p. 1-1s/05.
12. Fabczak, H., Bum, P. P., Fabczak, S., et al., Possible Role of G protein and cGMP in Stentor coerulues, Photochem. Photobiol., 1993, vol. 57, no. 4, pp. 702-706.
13. Robinson, J., Schmitt, F.J., Harosi, K.I., et al., Zebrafish Ultraviolet Visual Pigment: Absorption Spectrum, Sequence and Localization, Proc. Natl Acad. Sci. USA, 1993, vol. 90, no. 13, pp. 6009-6012.
14. Makino, C.L. and Dodd, R.L., Multiple Visual Pigments in a Photoreceptor of the Salamander Retina, J. Gen. Physiol., 1996, vol. 108, no. 1, pp. 21-34.
15. Loew, E.R., Govardovskii, V.I., Rohlich, P.T, van Veen, et al., Microspectrophotometric and Immunocytochemical Identification of Ultraviolet Photoreceptors in Geckos, Visual Neurosci., 1996, no. 2, pp. 247-256.
16. Bowmaker, J.K., The Visual Pigments of Fish, Prog. Retinal Eye Res., 1995, vol. 15, pp. 1-31.
17. Hays, T., Lin, S.H., and Eyring, H., Wavelength Regulation in Rhodopsin: Effects of Dipoles and Amino Acid Side Chain, Proc. Natl Acad. Sci. USA, 1980, vol. 77, no. 11, pp. 6314-6318.
18. Harosi, F.I., An Analysis of Two Spectral Properties of Vertebrate Visual Pigments, Vision Res., 1994, vol. 34, no. 11, pp. 1359-1367.
19. Etingof, R.N. and Dumler, I.L., Functional Blocks of the Signal Transduction System in Retinal Photoreceptors: Evolutionary Aspects, Zh. Evol. Biokhim. Fiziol., 1989, vol. 25, pp. 195-214.
20. Haupts, U., Haupts, C., and Oesterhelt, D., The Photoreceptor Sensory Rhodopsin I as a Two-Photon-Driven Proton Pump, Proc. Natl Acad. Sci. USA, 1995, vol. 92, no. 9, pp. 3834-3838.
21. Engelhard, M., Scharf, B., and Sielbert, F., Protonation Changes During the Photocycle of Sensory Rhodopsin-II from Natronobacterium pharaonis, FEBS Lett., 1996, vol. 396, no. 2, pp. 195-198.
22. Scharf, B., Hess, B., and Engelhard, M., Chromophore of Sensory Rhodopsin-II from Halobacterium halobium, Biochemistry, 1992, vol. 31, no. 49, pp. 12486-12492.
23. Fodor, S.P., Gebhard, R., Lugtenburg, J., et al., Structure of the Chromophore in Sensory Rhodopsin-I from Resonance Raman Spectroscopy, J. Biol. Chem., 1989, vol. 264, no. 31, pp. 18280-18283.
24. Krebs, M.P., Spudich, E.N., Khorana, H.G., et al., Synthesis of a Gene for Sensory Rhodopsin-I and Its Functional Expression in Halobacterium halobium, Proc. Nat. Acad. Sci. USA, 1993, vol. 90, no. 8, pp. 3486-3495.
25. Hildebrandt, V., Fendler, K., Hebedic, J., et al., Bacteriorhodopsin Expressed in Schizoacharomyces pombe Pumps Protons through the Plasma Membrane, Proc. Natl Acad. Sci. USA, 1993, vol. 90, no. 8, pp. 3578-3582.
26. Bing, Yan, Xie, A., Nienhaus, G., et al., Steric Constrains in the Retinal Binding Pocket of Sensory Rhodopsin-I, Biochemistry, 1993, vol. 32, no. 38, pp. 10224-10232.
27. Schulten, K. and Tavan, P., A Mechanism for the Light-Driven Proton Pump of Halobacterium halobium, Nature (London), 1978, vol. 272, no. 5648, pp. 85-87.
28. Abdulaev, N.G., Dendur, N.A., Dergachev, A.E., et al., The Chromophore Does Not Change Its Attachment Site, Lysine 216 during Proton Translocation in Light-Dark Adaptation, Biophys. Struct. Mechanism, 1984, vol. 10, no. 1, pp. 211-227.
29. Maeda, A., Sazaki, J., and Okita, M.Y., Tryptophan Perturbation in the L Intermediate of Bacteriorhodopsin: Fourier Transform, Infrared Analysis with Indole-15, N Shiff, Biochemistry, 1992, vol. 31, no. 50, pp. 12543-12545.
30. Kolodner, P., Lukachev, E.P., Yuan, Chin-Ching, et al., Electric Field Induced Sniff-Base Deprotonation in D85N-Mutant Bateriorhodopsin, Proc. Natl Acad. Sci. USA, 1996, vol. 93, no. 21, pp. 11618-11621.
31. Haupts, U., Titter, J., Banberg, E., et al., General Concept for Ion Translocation by Halobacterial Retinal Proteins: The Izomerization (Switch) Transfer (IST) Model, Biochemistry, 1997, vol. 36, no. 1, pp. 2-7.
32. Grishanin, R.N., Bibikov, S.I., Kaulen, A.D., et al., The Bacteriorhodopsin Proton Pump as a Receptor of "Color Vision" in Halobacterium sanitarium, Biokhimiya, 1994, vol. 59, no. 10, pp. 1598-1607.
33. Spudich, E.N. and Spudich, J., The Photochemical Reactions of Sensory Rhodopsin-I Are Altered by Its Transducer, J. Biol. Chem., 1993, vol. 268, no. 22, pp. 16095-16097.
34. Hegemann, P., Deininger, W., Holland, E., et al., Clamyrhodopsin, a Fast Sensory Signal Converter, Proc. of 6th Congress of the European Society for Photobiology, University of Cambridge, UK, 1995, p. 1-1s/02.
35. Foster, K.W., Saranak, J., Patel, N., et al., A Rhodopsin Is the Functional Photoreceptor for Phototaxis in Unicellular Eucaryote Chlamydomonas, Nature (London), 1984, vol. 30, no. 5988, pp. 756-759.
36. Derguini, F., Masur, K., Nakanishi, D., et al., All-Trans-Retinal Is the Chromophore Bound to the Photoreceptor of the Alga Clamydomonas reinhardtii, Photochem. Photobiol., 1991, vol. 54, no. 6, pp. 1017, 1022.
37. Furaev, V.V., Rychkova, M.P., and Korol'kov, S.N., On the Light-Sensitive Protein of the Unicellular Green Alga Chlamydomonas reinhardtii, Zh. Evol. Biokhim. Fiziol., 1996, vol. 32, no. 3, pp. 261-266.
38. Korol'kov, S.N., Garnovskaya, M.N., Basov, A.S., et al., On the Functional Similarity of Vertebrate Rhodopsin and Photosensitive Pigment of the Unicellular Flagellate Alga Chlamydomonas reinhardtii, Zh. Evol. Biokhim. Fiziol., 1989, vol. 25, no. 6, pp. 777-780.
39. Korol'kov, S.N. and Etingof, R.N., The Signal Transduction from Rhodopsin-Like Protein during Phototaxis of Clamydomonas reinhardtii: Similarity to and Difference from Retinal Photoreceptors, Biol. Membr., 1994, vol. 9, nos. 10-11, pp. 1128-1129.
40. Korol'kov, S.N. and Etingof, R.N., The Chimerical Photoreceptor System of the Vertebrate Retina: in vitro Replacement of Rhodopsin by Photosensitive Protein of Unicellular Alga Chlamydomonas reinhardtii, Biol. Membr., 1994, vol. 11, no. 2, pp. 161-168.
41. Buczyto, J., Saari, J.C., Grouch, P.K., et al., Mechanisms of Opsin Activation, J. Biol. Chem., 1996, vol. 271, no. 34, pp. 20621-20630.
42. Furaev, V.V., Rychkova, M.P., Korol'kov, S.N., and Etingof, R.N., The Role of ATP and GDP in the Process of Photoinduced Activation of 3′,5′-cGMP Phosphodiesterase by Rhodopsin from the Vertebrate Retina Photoreceptor Membranes, Biol. Memb., 1996, vol. 13, no. 1, pp. 116-118.
43. Korol'kov, S.N., Garnovskaya, M.N., Basov, A.S., et al., The Detection and Characterization of G Proteins in the Eyespot of Chlamydomonas reinhardtii, FEBS Lett., 1990, vol. 270, nos. 1-2, pp. 132-134.
44. Friedman, N., Druckmann, S., Landi, P., et al., A Covalent Link between the Chromophore and the Protein Chromophore and the Protein Backbone of Bacteriorhodopsin is not Required for Forming a Photochemically Active Pigment Analogous in the Wild Type, Biochemistry, 1994, vol. 33, no. 8, pp. 1971-1976.
45. Etingof, R.N., On Receptor Components of Sensory Systems: Conservatism of Principles of Their Interaction, Zh. Evol. Biokhim. Fiziol., 1995, vol. 31, pp. 208-215.
46. Corelli, A., Lobasso, S., Corella, M., et al., Role of Palmitic Acid in the Isolation and Properties of Halorhodopsin, Biochim. Biophys. Acta, 1996, vol. 1281, no. 2, pp. 172-181.
47. Milligan, G., Parenti, M., and Magee, A.I., The Dynamic Role of Palmitoylation in Signal Transduction, Trends in Biochem. Sci., 1995, vol. 20, no. 5, pp. 181-186.
48. Artem'ev, I.O. and Etingof, R.N., On Methylation of 3′,5′-cGMP Phosphodiesterase in the Retina Photoreceptor Membranes, Biokhimiya, 1987, vol. 49, no. 1, pp. 154-159.
49. Shutt, C.E., Myslik, J.C., Rozychi, M., et al., The Structure of Cristalline Profilin b-Actin, Nature (London), 1993, vol. 365, no. 6449, pp. 810-816.
50. Kharauzov, A.K., Shelepin, Yu.E., Pozdeev, N.V., and Etingof, R.N., Changes in Electroretinogram of Cambell Rats in the Course of Development of Hereditary Retina Degeneration, Fiziol. Zh., 1996, vol. 82, nos. 8-9, pp. 73-79.
51. Pozdeev, N.V. and Etingof, R.N., Melatonin Biosynthesis in the Pineal Gland of Normal Rats and Rats with Hereditary Retina Degeneration in Early Ontogeny, Byul. Exper. Biol. Med., 1997, vol. 123, pp. 131-135.
52. Lavilska, J.B., The Role of Dopamine in the Regulation of Melatonin Biosynthesis in Vertebrate Retina, Acta Neirobiol. Exp. (Warszawa), 1994, pp. 47-56.
53. Hankins, M. and Ikeda, H., Early Abnormalities of Retinal Dopamine Pathways in Rats with Hereditary Dystrophy, Doc. Ophtalmol., 1994, vol. 86, no. 3, pp. 323-334.
54. Banes, L., Bunter, B., and Ostowska, Z., Levels of Melatonin in Serum of Patients with Retinitis Pigmentosa, Klin. Oczna, 1995, vol. 97, no. 11-12, pp. 321-323.
55. Etingof, R.N., Shushacova, N.D., and Yefimova, M.G., Iron and Hereditary Degeneration of the Retina, Degenerative Disease of the Retina, Anderson, R., Hollyfield, J., and Lavail, M., Eds., New York: Plenum, 1995, pp. 177-186.
56. Chuang, J.I., Effect of Melatonin on NF-kB DNA Binding Activity in the Rat Spleen, Cell Biol., 1996, vol. 20, no. 10, pp. 687-692.
57. Frishman, D.I. and Berman, A.L., Evolution of Signal Receptor Proteins: Conservative Sites and Similarity to the GTP-Binding Proteins, Zh. Evol. Biokhim. Fiziol., 1990, vol. 26, no. 1, pp. 14-29.