Expression of a Pseudomonas putida Aminotransferase Involved in Lysine Catabolism Is Induced in the Rhizosphere

Applied and Environmental Microbiology

Volumn 67, Issue 3-12, 2001, Pages 5219-5224

  Manuel, Espinosa Urgel ^a   Ramos, Juan Luis ^a  

^a CSIC   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

PSEUDOMONADACEAE; PSEUDOMONAS; PSEUDOMONAS PUTIDA; ZEA MAYS;

AMINOTRANSFERASE; LYSINE;

ARTICLE; CHEMOLUMINESCENCE; ENZYMOLOGY; GENE EXPRESSION REGULATION; GENETICS; MAIZE; METABOLISM; MICROBIOLOGY; PHYSIOLOGY; PLANT ROOT; PSEUDOMONAS PUTIDA; TRANSPOSON;

CHEMILUMINESCENT MEASUREMENTS; DNA TRANSPOSABLE ELEMENTS; GENE EXPRESSION REGULATION, BACTERIAL; LYSINE; MUTAGENESIS, INSERTIONAL; PLANT ROOTS; PSEUDOMONAS PUTIDA; SOIL MICROBIOLOGY; TRANSAMINASES; ZEA MAYS;

EID: 2242464893     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.67.11.5219-5224.2001     Document Type: Article

References (26)

1. Abril, M. A., C. Michán, K. N. Timmis, and J. L. Ramos. 1989. Regulator and enzyme specificities of the TOL. plasmid-encodcd upper pathway for degradation of aromatic hydrocarbons and expansion of the substrate range of the pathway. J. Bacteriol. 171:6782-6790.
2. Altschul, S. F., T. L. Madden, A. A. Schäffer, J. Zhang, L. Zhang, W. Miller, and D. J. Liproan. 1997. Gapped BLAST and PSI-BLAST: a new generation ul protein database search programs. Nucleic Acids Res. 25:3381-3-402.
3. Ausubel, F. M., R. Brent, R. E. Kingston, D. D. Moore, J. A. Smith, J. C. Seidnian, and K. Struhl (ed.), 1987. Current protocols in molecular biology. John Wiley & Sons. New York, N.Y.
4. Bartsch, K., A. von Johnn-Marteville, and A. Schutz. 1990. Molecular analysis of two genes of the Escherichia coli gab cluster sequence of the glutamatersuccinic semialdehyde transaminase gene (gabT) and characterization of the succinic seraialdehde dehydrogenase gene (gabD). J. Bacteriol. 172: 7035-7042.
5. Bayliss, C., E. Bent, D. E. Culham, S. MacLellan, A. J. Clarke, G. L. Brown, and J. M. Wood. 1997. Bacterial genetic loci implicated in the Pseudomtonas putida GR12-2R3-canola mutualism: identification of an exudate-inducible sugar transporter. Can. J. Microbiol. 43:809-818.
6. Bhagwat, A. A., and D. L. Keister. 1992. Identification and cloning of Bradvrhizobium japonicum genes expressed strain selectively in soil and rhizosphere. Appl. Environ. Microbiol. 58:1490-l495.
7. Blemberg, G. V., G. A. O'Toole, B. J. J. Lugtenberg, and R. Kolter. 1997. Green fluorescent protein as a marker for Pseudomonus spp. Appl. Environ. Microbiol. 63:4543-4551.
8. Buell, C. R., and A. J. Anderson. 1992. Genetic analysis of the agg-4 locus involved in agglutination and adherence of Pseualomonas putida, a beneficial fluorescent pseudomonad. Mol. Plant-Microbe Interact. 5:154-162.
9. Dekkers, L., C. C. Phoelich, L Van der Fits, and B. J. J. Lugtenberg. 1998. A site-specific recombinase is required for competitive rool colonization by Pseudomonas flurescens WCS365. Proc. Natl. Acad. Sci. USA 95:7051-7056.
10. de Lorenzo, V., M. Herrero, U. Jakubzik, and K. N. Timmis. 1990. Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria. J. Bacteriol. 172:6568-6572.
11. De Weger, L. A., C. I. M. Van der Vlugt, A. H. M. Wijfies, P. A H. M. Bakker, B. Schippers, and B. J. J. Luglenberg. 1987 Flagella of a plant growth-stimulating Pseudomonas flurescens strain are required for colonization of potato roots. J. Bacteriol. 169:2769-2773.
12. Dörr, J., T. Hurek, and B. Reinhold-Hurek. 1988. Type IV pili are involved in plant-microbe and fungus-microbe interactions. Mol. Microbiol. 30:7-17.
13. Espinosa-Urgel, M., A. Salido, and J. L. Ramos. 2000. Genetic analysis of functions involved in adhesion of Pseudomonas putida to seeds. J. Bacteriol. 182:2363-2369.
14. WWO from Pseudomonas putida and cloning of genes for the entire regulated aromatic ring meta-cleavage pathway. Proc. Natl. Acad. Sci. USA 78:7458-7462.
15. Jaeger, C. H., III. S. K. Lindow, W. Miller, E. Clark, and M. K. Firestone. 1999. Mapping of sugar and amino acid availability in soil around roots with bacterial sensors of sucrose and tryplophan Appl. Environ. Microbiol. 65: 2685-2690.
16. Lugtenberg, B. J. J., L. V. Kravchenko, and M. Simons. 1999. Tomato seed and root exudate sugars: composition, utilization by Pseudomonas biocontrol strains and role in rhizosphere colonization. Environ. Microbiol. 1:439-446.
17. Molina, L, C. Ramos, E. Duque, M. C. Ronchel, J. M. García, L. Wyke, and J. L. Ramos. 2000. Survival of Pseudomonas putida KT2440 in soil and in the rhizosphere of plants under greenhouse and environmental conditions. Soil Biol. Biochem 32:315-321.
18. Phillips, A. T. 1986. Biosynthetic and catabolic features of amino acid metabolism in Pseudomonas. p 385-438. In J. R. Sokatch (ed.), The bacteria. A treatise on structure and function. vol. X. The biology of Pseudomonas. Academic Press, Orlando, Fla.
19. Rainey, P. B. 1999. Adaptation of Pseudomonas flurescens to the plant rhizosphere. Environ. Microbiol. 1:243-257.
20. Rodelas, B., J. K. Lithgow, F. Wisniewski-Dye, A. Hardman, A. Wilkinson, A. Economou, P. Williams, and J. A. Downie. 1999. Analysis of quorum-sensing-dependent control of rhizosphere-expresscd (rhi) genes in Rhizobium leguminosarum. bv. viciae. J. Bacteriol. 181:3816-3823.
21. Rodríguez-Herva, J. J., M. I. Ramos-González, and J. L. Ramos. 1996. The Pseudomonas putida peptidoglycan-associated outer membrane lipoprotein is involved in maintenance of the integrity of the cell envelope. J. Bactenol. 178:1699-1706.
22. Sambrook, J., E. K. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual. 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
23. Smit, G., S. Swart, B. J. J. Lugtenberg, and J. W. Kijne. 1992. Molecular mechanisms of attachment of Rhizobium bacteria to plant roots. Mol. Microbiol. 6:2897-2903.
24. Vande Broek, A. M. Lambrecht, and J. Vanderleyden. 1998. Bacterial chemolactic motility is important for the initiation of wheat root colonization by Azospirillum brasilense. Microbiology 144:2599-2606.
25. Vílehez, S., L. Molina, C. Ramos, and J. L. Ramos. 2000. Proline catabolism by Pseudomonas putida: cloning, characterisation, and expression of the put genes in the presence of root exudates. J. Bacteriol. 182:41-94.
26. Winson, M. K., S. Swift, P. J. Hill, C. M. Sims, G. Griesmayr, B. W. Bycroft, P. Williams, and G. S. A. B. Stewart. 1998. Engineering the haCDABE genes from Photorhabdus luminescens to provide a bioluminescent reporter for constitutive and promoter probe plasmids and min:-Tn5 constructs. FEMS Microbiol. Lett. 163:193-202.