Detection of gene expression patterns in various plant tissues using non-radioactive mRNA in situ hybridization

World Wide Web Journal of Biology

Volumn 4, Issue , 1999, Pages 70-85

  Shu, Guoping G ^a,b,c   Baum, David A ^b   Mets, Laurens J ^a  

^a UNIVERSITY OF CHICAGO   (United States)

^b HARVARD UNIVERSITY   (United States)

^c DuPont Biosolutions Enterprise   (United States)

Author keywords

Arabidopsis; Asteraceae; Gene expression; In situ hybridization; mRNA; Multiple probe arraying; PCR; Probe labeling

Indexed keywords

ARABIDOPSIS; ASTERACEAE; BRASSICACEAE; EMBRYOPHYTA; EUKARYOTA; FLAVERIA; FLAVERIA TRINERVIA;

EID: 2242422920     PISSN: None     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (20)

1. John, H.A., Birnstiel, M. L., and Jones, K.W. (1969) RNA-DNA hybrids at the cytological level. Nature 223, 582-587.
2. Pardue, M. L., Gall, J. G. (1969) Molecular hybridization of radioactive DNA to the DNA of cytological preparation. Proc. Natl. Acad. Sci. USA 64, 600-604.
3. Angerer, L. M., and Angerer, R.C. (1981) Detection of poly A+ RNA in sea urchin eggs and embryos by quantitative in situ Hybridization. Nucleic Acids Research 9, 2819-2840.
4. Cox, K. H., DeLeon, D.V., Angerer, L. M., and R.C. Angerer (1984) Detection of mRNAs in Sea Urchin embryos by in situ hybridization using asymmetric RNA probes. Developmental Biology 101, 485-502.
5. Harris, N. (1991) Molecular histochemistry and plant biology: a review. J. of Microscopy 166, 3-14.
6. Reikhel, N. V., Bednarek, S. Y., and Lerner, D. R. (1994) In situ RNA hybridization in plant tissues. In S. B. Gelvin and R. A. Schilperoort ed, Plant Molecular Biology Manual Vol. 2, B9 1-32.
7. Boehringer Mannheim Manual: The Genius System User's Guide for Filter Hybridization, 1997,Boehringer Mannheim Corporation, Biochemical Products, Indianapolis, USA.
8. Braissant, O. and Wahil ,W. (1998) A simplified in situ hybridization protocol using non-radioactively labeled probes to detect abundant and rare mRNAs on tissue sections. Biochemica 1, 10-16.
9. Kononen, J., Bubendorf, L., Kallioniemi, A., Barlund, M., Schraml, P., Leighton S., Torhorst J., Mihatsch, M. J., Sauter, G., Kallioniemi, O. P. (1998) Tissue microarrays for high-throughput molecular profiling of tumor specimens. Nat Med. 4, 844-7.
10. Bubendorf ,L et al.(1999) Survey of gene amplifications during prostate cancer progression by high-throughout fluorescence in hybridization on tissue microarrays. Cancer Res. 59, 803-6.
11. Langdale JA, Zelitch I, Miller E, Nelson T (1988b) Cell position and light influence C4 versus C3 patterns of photosynthetic gene expression in maize. EMBO J. 7, 3643-3651.
12. Jackson D (1991) In situ hybridization in plants. In Bowles D. J. , Gurr S. J. , and M. McPherson ed, Molecular Plant Pathology: A Practical Approach. Oxford University
13. Wang JL, Klessig DF, and Berry JO (1992) Regulation of C4 gene expression in developing amaranth leaves. Plant Cell 4, 173-184
14. Shu G., Pontieri V, Dengler NG, and Mets, L J (1999) Light induction of cell type differentiation and cell type-specific gene expression in cotyledons of a C4 plant, Flaveria trinervia (Asteraceae). Plant Physiology 121, 731-741
15. Shu G., Amaral W. , Hileman L., D. A. Baum LEAFY and the evolution of rosette-flowering in violet cress (Jonopsidium acaule, Brassicaceae). Amer. J. Botany (in press).
16. Hermans J, Westhoff P (1992) Homologous genes for C4 isoform of phosphoenolpyruvate carboxylase in a C3 and a C4 Flaveria species. Mol Gen Genet 234, 275-284.
17. Liu Z. and E. M. Meyerowitz E. M., (1995) LEUNIG regulates AGAMOUS expression in Arabidopsis flowers. Development 121, 975-991.
18. Drew G. A., Bowman J.L., and Meyerowitz E. M. (1991) Negative regulation of the Arabidopsis homeotic gene AGAMOUS by the APETALA2 product. Cell 65, 991-1002.
19. Bowman J.L., Drews G.N., and Meyerowitz E. M. (1991) Expression of the Arabidopsis floral gene AGAMOUS is restricted to specific cell types in flower development. Plant Cell 3, 749-758.
20. Yanofsky E. M., (1990) The protein encoded by the Arabidopsis homeotic gene agamous transcription factors. Nature 3467, 35-39.