Biochemical and molecular modeling analysis of the ability of two p-aminobenzamidine-based sorbents to selectively purify serine proteases (fibrinogenases) from snake venoms

Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences

Volumn 822, Issue 1-2, 2005, Pages 1-9

  De Simone, S G ^a,d   Correa Netto, C ^a,c   Antunes, O A C ^b   De Alencastro, R B ^b   Silva Jr , F P ^a,b  

^a INSTITUTO OSWALDO CRUZ   (Brazil)

^b Depto Quim Organ Inst Quim U   (Brazil)

^c Instituto Vital Brazil   (Brazil)

^d FLUMINENSE FEDERAL UNIVERSITY   (Brazil)

Author keywords

Affinity chromatography; Bothrops jararacussu; Enzymatic specificity; Lachesis muta rhombeata; Molecular modelling; p Aminobenzamidine; Serine proteinase; Thrombin like

Indexed keywords

BENZENE; BIOCHEMISTRY; COMPUTER SIMULATION; ENZYMES; MATHEMATICAL MODELS; MOLECULAR DYNAMICS; PURIFICATION; TOXIC MATERIALS;

MOLECULAR MODELING ANALYSIS; SNAKE VENOMS; SORBENTS; THROMBIN LIKE SERINE PROTEASES (TLSP);

CHROMATOGRAPHIC ANALYSIS;

4 AMINOBENZAMIDINE; BATROXOBIN; SERINE PROTEINASE; SNAKE VENOM; SORBENT; THROMBIN;

ARTICLE; BIOCHEMISTRY; ENZYME PURIFICATION; ENZYME SPECIFICITY; ENZYME STRUCTURE; HYDROPHOBICITY; MATRIX ATTACHMENT REGION; MOLECULAR MODEL; PRIORITY JOURNAL; PROTEIN INTERACTION; STRUCTURE ANALYSIS; SURFACE PROPERTY;

AMINO ACID SEQUENCE; ANIMALS; BENZOYLARGININE NITROANILIDE; BOTHROPS; CHROMATOGRAPHY, AFFINITY; CROTALID VENOMS; HYDROPHOBICITY; MODELS, MOLECULAR; SEPHAROSE; SERINE ENDOPEPTIDASES; SERINE PROTEINASE INHIBITORS; VIPER VENOMS; VIPERIDAE;

BOTHROPS JARARACUSSU; LACHESIS MUTA RHOMBEATA; MAMMALIA;

EID: 22244493880     PISSN: 15700232     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jchromb.2005.04.018     Document Type: Article

References (46)

1. H.C. Castro, R.B. Zingali, M.G. Albuquerque, M. Pujol-Luz, and C.R. Rodrigues Cell. Mol. Life Sci. 61 2004 1
2. S.Y. Cho, B.-S. Hahn, K.Y. Yang, and Y.S. Kim Toxicon 39 2001 499
3. Y. Jin, Q.-M. Lu, J.-F. Wei, D.-S. Li, W.-Y. Wang, and Y.-L. Xiong Toxicon 39 2001 1203
4. S.M.T. Serrano, C.A.M. Sampaio, R. Mentele, A.C.M. Camargo, and E. Fink Thromb. Haemost. 83 2000 438
5. S. Nishida, Y. Fujimura, S. Miura, Y. Ozaki, Y. Usami, M. Suzuki, K. Titani, E. Yoshida, M. Sugimoto, A. Yoshioka, and H. Fukui Biochemistry 33 1994 1843
6. S.S.M. Junior, C.O.A. Vianna, I. Ennes, S.A. Gomes, M.S. Freire, E.D. Silva, S.G. De-Simone, and M.T.B. Moraes J. Chromatogr. B 787 2003 303
7. R.E. Silva-Lopez, and S.G. De-Simone Exp. Parasitol. 107 2004 173
8. R.E. Silva-Lopez, J.A. Morgado-Diaz, C.R. Alves, and S.G. De-Simone Parasitol. Res. 93 2004 328
9. R.E. Silva-Lopez, and S.G. De-Simone Z. Naturforsch. 59C 2004 590
10. W.C. Lee, and K.H. Lee Anal. Biochem. 324 2004 1
11. J.V. Coumans, I. Humphery-Smith, and C.G. dos Remedios Electrophoresis 18 1997 1079
12. R.K. Rasmussen, H. Ji, J.S. Eddes, R.L. Moritz, G.E. Reis, R.J. Simpson, and D.S. Dorow Electrophoresis 19 1998 809
13. M. Mares-Guia, and E. Shaw J. Biol. Chem. 240 1965 1579
14. H.F. Hixon, and A.H. Nishikawa Arch. Biochem. Biophys. 154 1973 501
15. M. Ellouali, S. Khamlichi, J. Jozefonvicz, and D. Muller J. Chromatogr. 548 1991 255
16. K. Nakamura, T. Suzuki, M. Hasegawa, Y. Kato, H. Sasaki, and K. Inouye J. Chromatogr. A 1009 2003 133
17. K. Mizuno, K.T. Nakamura, K. Takada, S. Sakakibara, and H. Matsuo Biochem. Biophys. Res. Commun. 144 1987 807
18. G. Schmer Hoppe-Seyler's Z. Physiol. Chem. 353 1972 810
19. W.H. Holleman, and L.J. Weiss J. Biol. Chem. 251 1976 1663
20. S.S. Husein Arch. Biochem. Biophys. 285 1991 373
21. M.S. Runge, C. Bode, G.R. Matsueda, and E. Haber Proc. Natl. Acad. Sci. U.S.A. 84 1987 7659
22. T. Someno, T. Saino, K. Katoh, H. Miyazaki, and S. Ishii J. Biochem. 97 1985 1493
23. A. Kanamori, N. Seno, and I. Matsumoto J. Chromatogr. 363 1986 231
24. D. Grant, A. Magge, and J. Hermon-Tayler Eur. J. Biochem. 88 1978 183
25. M.L. Bender, M. Beuge-Canton, R. Blakeley, L. Brubacher, J. Feder, C. Gunter, F. Kezdy, J. Kilheffer Jr., T. Marshall, C. Miller, R. Roeske, and J. Stoors J. Am. Chem. Soc. 88 1966 5890
26. C.R. Brown J. Reprod. Fertil. 69 1983 289
27. A.J. Adeniran, T. Shoshani, M. Minuth, J.A. Award, J.B. Elce, and R.A. Johnson Biol. Reprod. 52 1995 490
28. J.P. Girolami, C. Pecher, J.L. Bascands, G. Cabos, A. Adam, and J.M. Suc Prep. Biochem. 19 1989 75
29. M. Kroger, and H. Tschesche Gene 196 1997 875
30. N.E. Labrou, and D.J. Rigden Eur. J. Biochem. 271 2004 983
31. B. Lomonte Toxicon 23 1985 173
32. Benzamidine Sepharose 4 Fast Flow Instruction, Amersham Biosciences (2000).
33. Bulletin A7155, p-Aminobenzamidine-agarose, Sigma Production Department.
34. O.H. Lowry, N.J. Rosebrough, L.A. Farr, and R.J. Randall J. Biol. Chem. 193 1951 265
35. U.K. Laemmli Nature 227 1970 680
36. A.S. Aguiar, C.R. Alves, A. Melgarejo, and S.G. De-Simone Toxicon 34 1996 555
37. B.F. Earlanger, N. Kokowsky, and W. Cohen Arch. Biochem. Biophys. 95 1961 271
38. T. Kakkar, H. Boxenbaum, and M. Mayersohn Drug Metab. Dispos. 27 1999 756
39. F.P. Silva Jr., and S.G. De-Simone Bioorg. Med. Chem. 12 2004 2571
40. B. Kramer, M. Rarey, and T. Lengauer Proteins: Struct. Funct. Genet. Suppl. 1 1997 221
41. F.P. Silva Jr., H.L.M. Guedes, C. Oliveira, S.C. Bourguignon, I.L. Torriani, S.G. De-Simone, FEBS J., submitted for publication.
42. A.M.V. Silveira, A. Magalhães, C.R. Diniz, and E.B. De Oliveira Int. J. Biochem. 21 1989 863
43. D.D. de-Carvalho, S. Marangoni, and J.C. Novello J. Prot. Chem. 21 2002 43
44. R. Talhout, and J.B.F.M. Engberts Eur. J. Biochem. 268 2001 1554
45. A. Magalhães, B.C.B. Da Fonseca, C.R. Diniz, J. Gilroy, and M. Richardson FEBS Lett. 329 1993 116
46. K.R. Zamudio, and H.W. Greene Biol. J. Linn. Soc. 62 1997 421