The power of line-narrowing techniques: Applications to photosynthetic chromoprotein complexes and autofluorescent proteins

Optics and Spectroscopy (English translation of Optika i Spektroskopiya)

Volumn 98, Issue 5, 2005, Pages 699-711

  Purchase, R ^a   Bonsma, S ^a   Jezowski, S ^a   Gallus, J ^a,c   Konz F ^a,d   Volker S ^a,b  

^a LEIDEN UNIVERSITY   (Netherlands)

^b VU UNIVERSITY AMSTERDAM   (Netherlands)

^c MEOS AG   (Germany)

^d Technical Highschool Stord/Haugesund   (Norway)

Author keywords

[No Author keywords available]

Indexed keywords

ABSORPTION; BACTERIA; CHLOROPHYLL; CHROMOSOMES; ENERGY TRANSFER; FLUORESCENCE; PHOTOSYNTHESIS; PROTEINS; SOLVENTS;

CHROMOPROTEIN COMPLEXES; HOLE BURNING; LINE-NARROWING TECHNIQUES; PHOTOSYSTEMS;

SPECTROSCOPIC ANALYSIS;

EID: 22144474036     PISSN: 0030400X     EISSN: None     Source Type: Journal    
DOI: 10.1134/1.1929056     Document Type: Article

References (97)

1. R. I. Personov, E. I. Al'shits, and L. A. Bykovskaya, Opt. Commun. 6, 169 (1972);
2. JETP Lett. 15, 431 (1972).
3. E. I. Al'shits, R. I. Personov, and B. M. Kharlamov, Chem. Phys. Lett. 40, 116 (1976);
4. JETP Lett. 26, 586 (1977).
5. B. M. Kharlamov, R. I. Personov, and L. A. Bykovskaya, Opt. Commun. 12, 191 (1974);
6. Opt. Spectrosc. 39, 137 (1975);
7. Chem. Phys. Lett. 50, 407 (1977).
8. A. A. Gorokhovskii, R. K. Kaarli, and L. A. Rebane, JETP Lett. 20, 216 (1974);
9. Opt. Commun. 16, 282 (1976).
10. S. Völker and J. H. van der Waals, Mol. Phys. 32, 1703 (1976);
11. S. Völker, R. M. Macfarlene, A. Z. Genack, et al., J. Chem. Phys. 67, 1759 (1977).
12. H. de Vries and D. A. Wiersma, Phys. Rev. Lett. 36, 91 (1976).
13. J. M. Hayes and G. J. Small, Chem. Phys. 27, 151 (1978);
14. J. M. Hayes, R. P. Stout, and G. J. Small, J. Chem. Phys. 74, 4266 (1981).
15. S. Völker, in Relaxation Processes in Molecular Excited States, Ed. by J. Fünfschilling (Kluwer, Dordrecht, 1989), pp. 113-242, and references therein;
16. Annu. Rev. Phys. Chem. 40, 499 (1989), and references therein
17. . 9. V. Sundström, T. Pullerits, and R. van Grondelle, J. Phys. Chem. B 103, 2327 (1999), and references therein.
18. H. van Amerongen, L. Valkunas, and R. van Grondelle, Photosynthetic Excitons (World Sci., Singapore, 2000), and references therein.
19. G. R. Fleming and G. D. Scholes, Nature 431, 256 (2004), and references therein.
20. G. McDermott, S. M. Prince, A. A. Freer, et al., Nature 374, 517 (1995).
21. H. van der Laan, Th. Schmidt, R. W. Visschers, et al., Chem. Phys. Lett. 170, 231 (1990).
22. N. R. S. Reddy, G. J. Small, M. Seibert, and R. Picorel, Chem. Phys. Lett. 181, 391 (1991).
23. H. van der Laan, C. De Caro, Th. Schmidt, et al., Chem. Phys. Lett. 212, 569 (1993).
24. G. J. S. Fowler, R. W. Visschers, G. G. Grief, et al., Nature 355, 848 (1992).
25. C. De Caro, R. W. Visschers, R. van Grondelle, and S. Völker, J. Phys. Chem. 98, 10 584 (1994).
26. Th. Förster, Ann. Phys. (Leipzig) 2, 55 (1948);
27. in Modern Quantum Chemistry, Ed. by O. Sinanoglu (Academic, New York, 1965), Part 3, pp. 93-137.
28. G. D. Scholes and G. R. Fleming, J. Phys. Chem. B 104, 1853 (2000).
29. S. lang, M. D. Newton, and R. J. Silbey, Phys. Rev. Lett. 92, 218301 (2004).
30. V. Novoderezhkin, M. Wendling, and R. van Grondelle, J. Phys. Chem. B 107, 11534 (2003), and references therein.
31. H. Frauenfelder, S. G. Sligar, and P. G. Wolynes, Science 254, 1598 (1991);
32. H. Frauenfelder, B. H. McMahon, R. H. Austin, et al., Proc. Natl. Acad. Sci. USA 98, 2370 (2001);
33. P. W. Fenimore, H. Frauenfelder, B. H. McMahon, and R. D. Young, Proc. Natl. Acad. Sci. USA 101, 14408 (2004), and references therein.
34. R. Wannemacher, J. M. A. Koedijk, and S. Völker, Chem. Phys. Lett. 206, l (1993);
35. J. M. A. Koedijk, R. Wannemacher, R. J. Silbey, and S. Völker, J. Phys. Chem. 100, 19 945 (1996);
36. R. J. Silbey, J. M. A. Koedijk, and S. Völker, J. Chem. Phys. 105, 901 (1996), and references therein.
37. K. A. Littau, M. A. Dugan, S. Chen, and M. D. Fayer, J. Chem. Phys. 96, 3484 (1992);
38. H. C. Meijers and D. A. Wiersma, J. Chem. Phys. 101, 6927 (1994).
39. D. Thorn Leeson and D. A. Wiersma, Phys. Rev. Lett. 74, 2138 (1995);
40. Nature Struct. Biol. 2, 848 (1995);
41. D. Thorn Leeson, D. A. Wiersma, K. Fritsch, and J. Friedrich, J. Phys. Chem. B 101, 6331 (1997).
42. J. Schlichter, J. Friedrich, L. Herenyi, and J. Fidy, J. Chem. Phys. 112, 3045 (2000);
43. J. Schlichter and J. Friedrich, J. Chem. Phys. 114, 8718 (2001).
44. T. M. H. Creemers, C. A. De Caro, R. W. Visschers, et al., J. Phys. Chem. B 103, 9770 (1999).
45. T. M. H. Creemers and S. Völker, in Shpol'skii Spectroscopy and Other Site-Selection Methods, Ed. by C. Gooijer, F. Ariese, and J. W. Hofstraat (Wiley, New York, 2000), p. 273, and references therein.
46. F. T. H. den Hartog, J. P. Dekker, R. van Grondelle, and S. Völker, J. Phys. Chem. B 102, 11007 (1998).
47. F. T. H. den Hartog, C. van Papendrecht, U. Störkel, and S. Völker, J. Phys. Chem. B 103, 1375 (1999).
48. C. Hofmann, T. J. Aartsma, H. Michel, and J. Köhler, Proc. Natl. Acad. Sci. USA 100, 15534 (2003).
49. D. Rutkauskas, V. Novoderezkhin, R. J. Cogdell, and R. van Grondelle, Biochemistry 43, 4431 (2004).
50. S. Karrasch, P. A. Bullough, and R. Ghosh, EMBO J. 14, 631 (1995).
51. J. F. Miller, S. B. Hinchigeri, P. S. Parkes-Loach, et al., Biochemistry 26, 5055 (1987).
52. R. W. Visschers, M. C. Chang, F. van Mourik, et al., Biochemistry 30, 5734 (1991).
53. A. M. van Oijen, M. Ketelaars, J. Köhler, et al., Science 285, 400 (1999);
54. Biophys. J. 80, 1591 (2001).
55. P. S. Parkes-Loach, T. J. Michalski, W. J. Dacs, et al., Biochemistry 29, 2951 (1990);
56. J. N. Sturgis and B. Robert, J. Mol. Biol. 238, 445 (1994).
57. C. De Caro, R. W. Visscers, R. van Grondelle, and S. Völker, J. Lumin. 58, 149 (1994).
58. M. D. Payer, Annu. Rev. Phys. Chem. 52, 315 (2001), and references therein.
59. V. V. Ponkratov, J. Friedrich, J. Vanderkooi, et al., J. Low Temp. Phys. 137 (3/4) (2004).
60. R. Y. Tsien, Annu. Rev. Biochem. 67, 509 (1998), and references therein.
61. Green Fluorescent Protein: Properties, Applications and Protocols, Ed. by M. Chalfie and S. Kain (Wiley-Liss, New York, 1998).
62. M. Zimmer, Chem. Rev. 102, 759 (2002), and references therein.
63. M. V. Matz, A. F. Fradkov, Y. A. Labas, et al., Nature Biotechnol. 17, 969 (1999).
64. H. Mizuno, A. Sawano, P. Eli, et al., Biochemistry 40, 2502 (2001).
65. T. M. H. Creemers, A. J. Lock, V. Subramaniam, et al., Nature Struct. Biol. 6, 557 (1999).
66. T. M. H. Creemers, A. J. Lock, V. Subramaniam, et al., Proc. Natl. Acad. Sci. USA 97, 2974 (2000).
67. T. M. H. Creemers, A. J. Lock, V. Subramaniam, et al., Chem. Phys. 275, 109 (2002).
68. S. Bonsma, J. Gallus, F. Könz, et al., J. Lumin. 107, 203 (2004).
69. F. Könz, R. Purchase, S. Bonsma, et al., J. Lumin. 108, 153 (2004).
70. D. C. Prasher, V. K. Eckenrode, W. W. Ward, et al., Gene 111, 229 (1992).
71. M. Chalfie, Y. Tu, G. Euskirchen, et al., Science 263, 802 (1994).
72. F. Yang, L. G. Moss, and G. N. Philips, Jr., Nature Biotechnol. 4, 1246 (1996);
73. M. Ormö, A. B. Cubitt, K. Kallio, et al., Science 273, 1392 (1996).
74. R. Heim, A. B. Cubitt, and R. Y. Tsien, Nature 373, 663 (1995);
75. R. Heim and R. Y. Tsien, Curr. Biol. 6, 178 (1996).
76. M. Chattoraj, B. A. King, G. U. Bublitz, and S. G. Boxer, Proc. Natl. Acad. Sci. USA 93, 8362 (1996);
77. H. Lossau, A. Kummer, R. Heinecke, et al., Chem. Phys. 213, 1 (1996).
78. W. W. Ward, H. J. Prentice, A. F. Roth, et al., Photochem. Photobiol. 35, 803 (1982).
79. R. M. Dickson, A. B. Cubitt, R. Y. Tsien, and W. E. Moerner, Nature 388, 355 (1997);
80. E. J. G. Peterman, S. Brasselet, and W. E. Moerner, J. Phys. Chem. A 103, 10553 (1999).
81. M. García-Parajó, G. M. J. Segers-Nolten, J.-A. Veenman, et al., Proc. Natl. Acad. Sci. USA 97, 7237 (2000).
82. M. L. Groot, J. P. Dekker, R. van Grondelle, et al., J. Phys. Chem. 100, 11488 (1996).
83. D. Tang, R. Jankowiak, M. Seibert, et al., J. Phys. Chem. 94, 6519(1990).
84. D. Tang, S. G. Johnson, R. Jankowiak, et al., in Proceedings of Twenty-Second Jerusalem Symposium: Perspectives in Photosynthesis, Ed. by J. Jortner and B. Pullman (Kluwer Academic, Boston, 1990), p. 99.
85. L. A. Gross, G. S. Baird, R. C. Huffman, et al., Proc. Natl. Acad. Sci. USA 97, 11990 (2000), and references therein.
86. I.-J. Lee, J. M. Hayes, and G. J. Small, J. Chem. Phys. 91, 3463 (1989).
87. J.-G. van der Toorn, MSc Thesis (Leiden Univ., 1997).
88. T. A. Schüttrigkeit, U. Zachariae, T. von Feilitzsch, et al., Chem. Phys. Chem. 5, 325 (2001).
89. V. Helenius, R. Monshouwer, and R. van Grondelle, J. Phys. Chem. B 101, 10554 (1997).
90. J. Gallus et al. (in press).
91. S. S. Lampoura, R. van Grondelle, I. H. M. van Stokkum, et al., J. Phys. Chem. B 104, 12072 (2000).
92. H.-M. Wu, M. Rätsep, I.-J. Lee, et al., J. Phys. Chem. B 101, 7654 (1997);
93. H.-M. Wu, N. R. S. Reddy, and G. J. Small, J. Phys. Chem. B 101, 651 (1997).
94. K. D. Rector, D. E. Thompson, K. Merchant, and M. D. Fayer, Chem. Phys. Lett. 316, 122 (2000);
95. K. S. Rector, J. Jiang, M. A. Berg, and M. D. Fayer, J. Phys. Chem. B 105, 1081 (2001).
96. A. Freiberg, M. Rätsep, K. Timpmann, and G. Trinkunas, J. Lumin. 102-103, 363 (2003);
97. K. Timpmann, M. Rätsep, C. N. Hunter, and A. Freiberg, J. Phys. Chem. B 108, 10588 (2004).