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Volumn 5, Issue 2, 2005, Pages 129-137

STEPP - Search Tool for Exploration of Petri net Paths: A new tool for petri net-based path analysis in biochemical networks

Author keywords

Biochemical networks; Graph theory; Metabolic networks; Path search with constraints; Petri nets; Potato tuber; Signal transduction networks; Sucrose to starch breakdown; Systems biology

Indexed keywords

ALGORITHM; ARTICLE; BIOCHEMISTRY; BIOINFORMATICS; CHEMICAL REACTION; COMPUTER INTERFACE; COMPUTER LANGUAGE; COMPUTER MODEL; COMPUTER NETWORK; COMPUTER PROGRAM; ENZYME ANALYSIS; GENETIC ANALYSIS; INFORMATION PROCESSING; INFORMATION RETRIEVAL; INTERNET; METABOLITE; PROTEIN DATABASE;

EID: 22144460567     PISSN: 13866338     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (10)

References (13)
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    • Heiner, M., Koch, I. and Will, J. (2004). Model validation of biological pathways using Petri nets - demonstrated for apoptosis. Biosystems 75, 15-28.
    • (2004) Biosystems , vol.75 , pp. 15-28
    • Heiner, M.1    Koch, I.2    Will, J.3
  • 5
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    • Quantitative Modelling of Biochemical Networks
    • Hofestädt, R. and Thelen, S. (1998). Quantitative Modelling of Biochemical Networks. In Silico Biol. 1, 0006.
    • (1998) In Silico Biol. , vol.1 , pp. 0006
    • Hofestädt, R.1    Thelen, S.2
  • 6
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of Genes and Genomes
    • Kanehisa, M. and Goto, S. (2000). KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 28, 27-30.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 7
    • 33645279080 scopus 로고    scopus 로고
    • Application of Petri net theory for modelling and validation of the sucrose breakdown pathway in the potato tuber
    • Advance Access, Nov. 16
    • Koch, I., Junker, B. H. and Heiner, M. (2004). Application of Petri net theory for modelling and validation of the sucrose breakdown pathway in the potato tuber. Bioinformatics, Advance Access, Nov. 16.
    • (2004) Bioinformatics
    • Koch, I.1    Junker, B.H.2    Heiner, M.3
  • 8
    • 35248875595 scopus 로고    scopus 로고
    • Towards Pathway Modelling and Simulation
    • Proc. IACATPN van der Aalst, W. and Best, E. (eds.), Springer Verlag, Berlin, LNCS
    • Matsuno, H., Fujita, S., Doi, A., Nagasaki, M. and Miyano, S. (2003). Towards Pathway Modelling and Simulation. In: Applications and Theory of Petri Nets 2003, Proc. IACATPN, van der Aalst, W. and Best, E. (eds.), Springer Verlag, Berlin, LNCS 2679, 3-22.
    • (2003) Applications and Theory of Petri Nets 2003 , vol.2679 , pp. 3-22
    • Matsuno, H.1    Fujita, S.2    Doi, A.3    Nagasaki, M.4    Miyano, S.5
  • 9
    • 0024645936 scopus 로고
    • Petri nets: Properties, analysis, and applications
    • Murata, T. (1989). Petri nets: Properties, analysis, and applications. Proc. of the IEEE 77, 541-580.
    • (1989) Proc. of the IEEE , vol.77 , pp. 541-580
    • Murata, T.1
  • 13
    • 0345096675 scopus 로고    scopus 로고
    • Steady State Analysis of metabolic pathways using Petri nets
    • Voss, K., Heiner, M. and Koch, I. (2003). Steady State Analysis of metabolic pathways using Petri nets. In Silico Biol. 3, 0031.
    • (2003) Silico Biol. , vol.3 , pp. 0031
    • Voss, K.1    Heiner, M.2    Koch, I.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.