Identification of genetic markers for Mycobacterium pinnipedii through genome analysis

FEMS Microbiology Letters

Volumn 248, Issue 2, 2005, Pages 147-152

  Bigi, Fabiana ^a   Garcia Pelayo, M Carmen ^b   Nuñez García, Javier ^b   Peralta, Andrea ^a   Caimi, Karina C ^a   Golby, Paul ^b   Hinds, Jason ^c   Cataldi, Angel ^a   Gordon, Stephen V ^b   Romano, Maria I ^a  

^a INSTITUTO NACIONAL DE TECNOLOGÍA AGROPECUARIA INTA   (Argentina)

^b VETERINARY LABORATORIES AGENCY   (United Kingdom)

^c ST GEORGE'S UNIVERSITY OF LONDON   (United Kingdom)

Author keywords

Deletion; Genomic; Mycobacterium bovis; Mycobacterium pinnipedii

Indexed keywords

ARTICLE; BACTERIAL GENETICS; BACTERIUM ISOLATE; DNA MICROARRAY; GENE DELETION; GENETIC IDENTIFICATION; GENETIC MARKER; GENETIC VARIABILITY; GENOME ANALYSIS; GENOMICS; MYCOBACTERIUM; MYCOBACTERIUM BOVIS; MYCOBACTERIUM PINNIPEDII; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL;

FUR SEALS; GENETIC MARKERS; GENOME, BACTERIAL; MYCOBACTERIUM; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; SPECIES SPECIFICITY; VARIATION (GENETICS);

MYCOBACTERIUM BOVIS; MYCOBACTERIUM MICROTI; MYCOBACTERIUM PINNIPEDII; MYCOBACTERIUM TUBERCULOSIS COMPLEX; PHOCIDAE;

EID: 21744433319     PISSN: 03781097     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.femsle.2005.05.034     Document Type: Article

References (17)

1. D.V. Cousins, R. Bastida, A. Cataldi, V. Quse, S. Redrobe, S. Dow, P. Duignan, A. Murray, C. Dupont, N. Ahmed, D.M. Collins, W.R. Butler, D. Dawson, D. Rodriguez, J. Loureiro, M.I. Romano, A. Alito, M. Zumarraga, and A. Bernardelli Tuberculosis in seals caused by a novel member of the Mycobacterium tuberculosis complex: Mycobacterium pinnipedii sp. nov Int. J. Syst. Evol. Microbiol. 53 2003 1305 1314
2. D.V. Cousins, S.N. Williams, R. Reuter, D. Forshaw, B. Chadwick, D. Coughran, P. Collins, and N. Gales Tuberculosis in wild seals and characterisation of the seal bacillus Aust. Vet. J. 70 3 1993 92 97
3. D. Forshaw, and G.R. Phelps Tuberculosis in a captive colony of pinnipeds J. Wildlife Dis. 27 2 1991 288 295
4. J.E. Hunter, P.J. Duignan, C. Dupont, L. Fray, S.G. Fenwick, and A. Murray First report of potentially zoonotic tuberculosis in fur seals in New Zealand New Zeal. Med. J. 111 1063 1998 130 131
5. A. Bernardelli, R. Bastida, J. Loureiro, H. Michelis, M.I. Romano, A. Cataldi, and E. Costam Tuberculosis in sea lions and fur seals from the south-western Atlantic coast Rev. Sci. Technol. 15 3 1996 985 1005
6. M.I. Romano, A. Alito, F. Bigi, J.C. Fisanotti, and A. Cataldi Genetic characterization of mycobacteria from South American wild seals Vet. Microbiol. 47 1-2 1995 89 98
7. R. Bastida, J. Loureiro, V. Quse, A. Bernardelli, D. Rodriguez, and E. Costa Tuberculosis in a wild subantarctic fur seal from Argentina J. Wildlife Dis. 35 4 1999 796 798
8. P.J. Thompson, D.V Cousins, B.L. Gow, D.M. Collins, B.H. Williamson, and HT. Dagnia Seals, seal trainers, and mycobacterial infection Am. Rev. Respir. Dis. 147 1 1993 164 167
9. R. Brosch, S.V. Gordon, M. Marmiesse, P. Brodin, C. Buchrieser, K. Eiglmeier, T. Garnier, C. Gutierrez, G. Hewinson, K. Kremer, L.M. Parsons, A.S. Pym, S. Samper, D. van Soolingen, and S.T. Cole A new evolutionary scenario for the Mycobacterium tuberculosis complex Proc. Natl. Acad. Sci. USA 99 6 2002 3684 3689
10. N. Ahmed, M. Alam, A. Abdul Majeed, S. Asad Rahman, A. Cataldi, D. Cousins, and S.E. Hasnain Genome sequence based, comparative analysis of the fluorescent amplified fragment length polymorphisms (FAFLP) of tubercle bacilli from seals provides molecular evidence for a new species within the Mycobacterium tuberculosis complex Infect. Genet. Evol. 2 3 2003 193 199
11. M.C. Garcia-Pelayo, K.C. Caimi, J.K. Inwald, J. Hinds, F. Bigi, M.I. Romano, D. vanSoolingen, R.G. Hewinson, A. Cataldi, and S.V. Gordon Microarray analysis of Mycobacterium microti reveals deletion of genes encoding PE-PPE proteins and ESAT-6 family antigens Tuberculosis 84 3-4 2004 159 166
12. M.J. Zumarraga, A. Bernardelli, R. Bastida, V. Quse, J. Loureiro, A. Cataldi, F. Bigi, A. Alito, M. Castro Ramos, S. Samper, I. Otal, C. Martin, and M.I. Romano Molecular characterization of mycobacteria isolated from seals Microbiology 145 9 1999 2519 2526
13. D. van Soolingen, A.G. van der Zanden, P.E. de Haas, G.T Noordhoek, A. Kiers, N.A. Foudraine, F. Portaels, A.H. Kolk, K. Kremer, and J.D. van Embden Diagnosis of Mycobacterium microti infections among humans by using novel genetic markers J. Clin. Microbiol. 36 7 1998 1840 1845
14. M. Zumarraga, C. Martin, S. Samper, A. Alito, O. Latini, F. Bigi, E. Roxo, M.E. Cicuta, F. Errico, M.C. Ramos, A. Cataldi, D. van Soolingen, and M.I. Romano Usefulness of spoligotyping in molecular epidemiology of Mycobacterium bovis-related infections in South America J. Clin. Microbiol. 37 2 1999 296 303
15. M. Marmiesse, P. Brodin, C. Buchrieser, C. Gutierrez, N. Simoes, V. Vincent, P. Glaser, S.T. Cole, and R. Brosch Macro-array and bioinformatic analyses reveal mycobacterial 'core' genes, variation in the ESAT-6 gene family and new phylogenetic markers for the Mycobacterium tuberculosis complex Microbiology 150 2 2004 483 496
16. A.G. Tsolaki, A.E. Hirsh, K. DeRiemer, J.A. Enciso, M.Z. Wong, M. Hannan, Y.O. Goguet de la Salmoniere, K. Aman, M. Kato-Maeda, and P.M. Small Functional and evolutionary genomics of Mycobacterium tuberculosis: insights from genomic deletions in 100 strains Proc. Natl. Acad. Sci USA 101 14 2004 4865 4870
17. A. Alito, M.I. Romano, F. Bigi, M. Zumarraga, and A. Cataldi Antigenic characterization of mycobacteria from South American wild seals Vet. Microbiol. 68 3-4 1999 293 299