Diversity of the organophosphate pesticide-degrading bacteria isolated from organophosphate pesticide polluted soil

Acta Ecologica Sinica

Volumn 25, Issue 6, 2005, Pages 1502-1508

  Zhang, Rui Fu ^a   Wu, Xu Ping ^a   Fan, Ben ^a   He, Jian ^a   Jiang, Jian Dong ^a   Li, Shun Peng ^a  

^a NANJING AGRICULTURAL UNIVERSITY   (China)

Author keywords

Degrading bacteria; Diversity; ERIC PCR finger profiles; Organophosphate pesticides; Phylogenetic analysis

Indexed keywords

ALCALIGENES; ALCALIGENES SP.; BACTERIA (MICROORGANISMS); BRUCELLA; ENTEROBACTERIACEAE; ESCHERICHIA COLI; OCHROBACTRUM; OCHROBACTRUM SP.; PSEUDAMINOBACTER;

EID: 21444459232     PISSN: 10000933     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (21)

1. Topp E, Zhu H, Nour S M, et al. Characterization of an atrazine-degrading Pseudaminobacter sp. isolated from Canadian and French agricultural soils. Appl. Environ. Microbial., 2000, 66(7):2773-2782.
2. Topp E, Mulbry W M, Zhu H, et al. Characterization of S-triazine herbicide metabolism by a Nocardioides sp. isolated from agricultural soils. Appl. Environ. Microbial., 2000, 66(8):3134-3141.
3. Fulthorpe R R, Rhodes A N, Tiedje J M. High levels of endemiccity of 3-chlorobenzoate-degrading soil bacteria. Appl. Environ. Microbial., 1998, 64(5): 1620-1627.
4. Wagner-Dobler I, Bennasar A. Microcosm enrichment of biphenyl-degrading microbial communities from soils and sediments. Appl. Environ. Microbial., 1998, 64(8):3014-3022.
5. Cui Z L, Zhang R F, He J, et al. Isolation and characterization of a p-nitrophenol degradation Pseudomonas sp. strain P3 and contruction of a genetically engineered bacterium. Acta Microbiologica Sinica, 2002, 42(1):19-26.
6. Cui Z L, Li S P, Fu G P. Isolation of Methyl Parathion-Degrading Strain M6 and Cloning of the Methyl Parathion Hydrolase Gene. Appl. Environ. Microbiol., 2001, 67(10):4922-4925.
7. Miller S A, Dykes D D, Polesky H F. A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res., 1988, 16(3):1215.
8. Edwards U, Rogall T, Blocker H, et al. Isolation and direct complete determination of entire genes. Nucleic Acids Res., 1989, 17(19): 7843-7853.
9. Wilson K H, Blitchington R B, Green R C. Amplification of bacterial 16S ribosomal DNA with polymerase chain reaction. J. Clin. Microbiol., 1990, 28(9):1942-1946.
10. Inoue H, Nojima H, Okayama H. High efficiency transformation of Escherichia coli with plasmids. Gene., 1990, 96(1):23-28.
11. Ulton C S J, Higgins C F, Sharp P M. ERIC sequences: a novel family of repetitive elements in the genomes of Escherichia coli, Salmonella typhi murium and other enterobacteria. Mol. Microbiol., 1991, 5(4):825-834.
12. Versalovic J, Koeuth T, Lupski J R. Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucleic Acids Res., 1991, 19(24):6823-6831.
13. Di Giovanni G D, Watrud L S, Seidler R J, et al. Fingerprinting of mixed bacterial strains and BIOLOG gram-negative (GN) substrate communities by enterobacterial repetitive intergenic consensus sequence-PCR (ERIC-PCR). Curr Microbiol., 1999, 38(4):217-23.
14. Borneman J, Triplett E W. Molecular microbial diversity in soils from eastern Amazonia: evidence for unusual microorganisms and microbial population shifts associated with deforestation. Appl. Environ. Microbiol., 1997, 63(7): 2647-2653.
15. Rousseaux S, Hartmann A, Soulas G. Isolation and characterization of new gram-negative and gram-positive atrazine degrading bacteria from different French soils. FEMS Microbiol. Ecol., 2001, 36(2-3):211-222.
16. Ka J O, Holben W E, Tiedje J M. Genetic and phenotypic diversity of 2,4-Dichlorophenoxyacetic acid(2,4-D)-degrading bacteria isolated from 2,4-D treated field soils. Appl. Environ. Microbial., 1994, 60(4):1106-1115.
17. Ka J O, Holben W E, Tiedje J M. Use of gene probes to aid in recovery and identification of funcationally dominant 2, 4-Dichlorophenoxyacetic acid(2,4-D)-degrading populations in soils. Appl. Environ. Microbial., 1994, 60(4):1116-1120.
18. Liu Z, Sun J C, Li S P. Isolation, identification and characters of methyl parathion degrading bacterium. Chin. J. Appl. Environ. Biol., 1995, 5(Suppl):147-150.
19. Chen Y L, Zhang X N, Liu H, et al. Study on Pseudomonas sp. WBC-3 capable of complete degradation of methylparathion. Acta Microbiologica Sinica, 2002, 42(4):490-497.
20. Serdar C M, DT Gibson, DM Munnecke, et al. Plasmid involvement in parathion hydrolysis by Pseudomonas diminuta. Appl. Environ. Microbial., 1982, 44(1):246-249.
21. Mulbry W W, Karns J S, Kearney P C, et al. Identification of a plasmid borne parathion hydrolase gene from Flavobacterium. sp by southern hybridization with opd from Pseudomonas diminuta. Appl. Environ. Microbial., 1986, 51(5):926-930.