Allergy-related genes in microarray: An update review

Journal of Allergy and Clinical Immunology

Volumn 116, Issue 1, 2005, Pages 56-59

  Saito, Hirohisa ^a   Abe, Jun ^a   Matsumoto, Kenji ^a  

^a NATIONAL RESEARCH INSTITUTE FOR CHILD HEALTH AND DEVELOPMENT   (Japan)

Author keywords

Bioinformatics; DNA chip; Microarray; Transcriptome

Indexed keywords

AMPHIREGULIN; COMPLEMENT COMPONENT C5A; DNA; IMMUNOGLOBULIN E; MESSENGER RNA; MUCIN 5AC; RNA; TRANSCRIPTOME;

ALLERGIC ASTHMA; ANTIGEN SPECIFICITY; BASOPHIL DEGRANULATION; BIOINFORMATICS; BRONCHUS HYPERREACTIVITY; CELL POPULATION; CELL TYPE; COMPLEMENT ACTIVATION; DNA MICROARRAY; EXPERIMENTAL INFECTION; GENETIC POLYMORPHISM; HOUSEKEEPING GENE; INFLAMMATORY INFILTRATE; MAST CELL DEGRANULATION; MOUSE STRAIN; NONHUMAN; PRIORITY JOURNAL; REVIEW; RNA TRANSCRIPTION; SPECIES COMPARISON; TOXICOGENETICS; TRANSCRIPTOMICS; UPREGULATION;

ANIMALS; COMPUTATIONAL BIOLOGY; GENE EXPRESSION PROFILING; HUMANS; HYPERSENSITIVITY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REPRODUCIBILITY OF RESULTS; SPECIES SPECIFICITY;

EID: 21344450321     PISSN: 00916749     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jaci.2005.03.048     Document Type: Review

References (16)

1. Editorial: getting hip to the chip Nat Genet 18 1998 195 197
2. Editorial: microarray standards at last Nature 419 2002 323
3. A. Brazma, P. Hingamp, J. Quackenbush, G. Sherlock, P. Spellman, and C. Stoeckert Minimum information about a microarray experiment (MIAME)-toward standards for microarray data Nat Genet 29 2001 365 371
4. E. Southern, K. Mir, and M. Shchepinov Molecular interactions on microarrays Nat Genet 21 1999 5 9
5. E. Marshall Getting the noise out of gene arrays Science 306 2004 630 631
6. C.L. Karp, A. Grupe, E. Schadt, S.L. Ewart, M. Keane-Moore, and P.J. Cuomo Identification of complement factor 5 as a susceptibility locus for experimental allergic asthma Nat Immunol 1 2000 221 226
7. N. Zimmermann, N.E. King, J. Laporte, M. Yang, A. Mishra, and S.M. Pope Dissection of experimental asthma with DNA microarray analysis identifies arginase in asthma pathogenesis J Clin Invest 111 2003 1863 1874
8. S.W. Wang, C.K. Oh, S.H. Cho, G. Hu, R. Martin, and S. Demissie-Sanders Amphiregulin expression in human mast cells and its effect on the primary human lung fibroblasts J Allergy Clin Immunol 115 2005 287 294
9. S. Okumura, H. Sagara, T. Fukuda, H. Saito, and Y. Okayama FcεRI-mediated amphiregulin production by human mast cells increases mucin gene expression in epithelial cells J Allergy Clin Immunol 115 2005 272 279
10. J. Kanno, K. Aisaki, A. Ono, and K. Igarashi Toxicogenomics using "Percellome" and "Millefeuille" data system [abstract] Toxicol Appl Pharmacol 197 2004 265
11. Y. Okayama, and M.K. Church Comparison of the modulatory effect of ketotifen, sodium cromoglycate, procaterol and salbutamol in human skin, lung and tonsil mast cells Int Arch Allergy Immunol 97 1992 216 225
12. T. Nakajima, N. Inagaki, H. Tanaka, A. Tanaka, M. Yoshikawa, and M. Tamari Marked increase in CC chemokine gene expression in both human and mouse mast cell transcriptomes following Fcε receptor I cross-linking: an interspecies comparison Blood 100 2002 3861 3868
13. M. Heishi, S. Kagaya, T. Katsunuma, T. Nakajima, K. Yuki, and A. Akasawa High-density oligonucleotide array analysis of mRNA transcripts in peripheral blood cells of severe atopic dermatitis patients Int Arch Allergy Immunol 129 2002 57 66
14. T. Nakajima, M. Iikura, Y. Okayama, K. Matsumoto, C. Uchiyama, and T. Shirakawa Identification of granulocyte subtype-selective receptors and ion channels by high-density oligonucleotide probe array J Allergy Clin Immunol 113 2004 528 535
15. J.R. Guajardo, K.W. Schleifer, M.O. Daines, R.M. Ruddy, B.J. Aronow, and M. Wills-Karp Altered gene expression profiles in nasal respiratory epithelium reflect stable versus acute childhood asthma J Allergy Clin Immunol 115 2005 243 251
16. H. Kitano Systems biology: a brief overview Science 295 2002 1662 1664