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Volumn 121, Issue 7, 2005, Pages 991-1004

Structural basis for the function of the ribosomal L7/12 stalk in factor binding and GTpase activation

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; DIMER; GUANOSINE TRIPHOSPHATASE; PROTEIN SUBUNIT; RIBOSOME PROTEIN; RIBOSOME PROTEIN L 12; RIBOSOME PROTEIN L 7; STALK PROTEIN; UNCLASSIFIED DRUG;

EID: 21244465843     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cell.2005.04.015     Document Type: Article
Times cited : (337)

References (37)
  • 1
    • 0032568584 scopus 로고    scopus 로고
    • Visualization of elongation factor G on the Escherichia coli 70S ribosome: The mechanism of translocation
    • R.K. Agrawal, P. Penczek, R.A. Grassucci, and J. Frank Visualization of elongation factor G on the Escherichia coli 70S ribosome: the mechanism of translocation Proc. Natl. Acad. Sci. USA 95 1998 6134 6138
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 6134-6138
    • Agrawal, R.K.1    Penczek, P.2    Grassucci, R.A.3    Frank, J.4
  • 2
    • 0032982866 scopus 로고    scopus 로고
    • EF-G-dependent GTP hydrolysis induces translocation accompanied by large conformational changes in the 70S ribosome
    • R.K. Agrawal, A.B. Heagle, P. Penczek, R.A. Grassucci, and J. Frank EF-G-dependent GTP hydrolysis induces translocation accompanied by large conformational changes in the 70S ribosome Nat. Struct. Biol. 6 1999 643 647
    • (1999) Nat. Struct. Biol. , vol.6 , pp. 643-647
    • Agrawal, R.K.1    Heagle, A.B.2    Penczek, P.3    Grassucci, R.A.4    Frank, J.5
  • 3
    • 0035943352 scopus 로고    scopus 로고
    • Localization of L11 protein on the ribosome and elucidation of its involvement in EF-G-dependent translocation
    • R.K. Agrawal, J. Linde, J. Sengupta, K.H. Nierhaus, and J. Frank Localization of L11 protein on the ribosome and elucidation of its involvement in EF-G-dependent translocation J. Mol. Biol. 311 2001 777 787
    • (2001) J. Mol. Biol. , vol.311 , pp. 777-787
    • Agrawal, R.K.1    Linde, J.2    Sengupta, J.3    Nierhaus, K.H.4    Frank, J.5
  • 4
    • 0034637111 scopus 로고    scopus 로고
    • The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution
    • N. Ban, P. Nissen, J. Hansen, P.B. Moore, and T.A. Steitz The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution Science 289 2000 905 920
    • (2000) Science , vol.289 , pp. 905-920
    • Ban, N.1    Nissen, P.2    Hansen, J.3    Moore, P.B.4    Steitz, T.A.5
  • 5
    • 0021183286 scopus 로고
    • The binding site for ribosomal protein complex L8 within 23S ribosomal RNA of Escherichia coli
    • A.A. Beauclerk, E. Cundliffe, and J. Dijk The binding site for ribosomal protein complex L8 within 23S ribosomal RNA of Escherichia coli J. Biol. Chem. 259 1984 6559 6563
    • (1984) J. Biol. Chem. , vol.259 , pp. 6559-6563
    • Beauclerk, A.A.1    Cundliffe, E.2    Dijk, J.3
  • 8
    • 0026026818 scopus 로고
    • The GTPase superfamily: Conserved structure and molecular mechanism
    • H.R. Bourne, D.A. Sanders, and F. McCormick The GTPase superfamily: conserved structure and molecular mechanism Nature 349 1991 117 127
    • (1991) Nature , vol.349 , pp. 117-127
    • Bourne, H.R.1    Sanders, D.A.2    McCormick, F.3
  • 9
    • 0031893261 scopus 로고    scopus 로고
    • Cross-linking of selected residues in the N- and C-terminal domains of Escherichia coli protein L7/L12 to other ribosomal proteins and the effect of elongation factor Tu
    • D. Dey, D.E. Bochkariov, G.G. Jokhadze, and R.R. Traut Cross-linking of selected residues in the N- and C-terminal domains of Escherichia coli protein L7/L12 to other ribosomal proteins and the effect of elongation factor Tu J. Biol. Chem. 273 1998 1670 1676
    • (1998) J. Biol. Chem. , vol.273 , pp. 1670-1676
    • Dey, D.1    Bochkariov, D.E.2    Jokhadze, G.G.3    Traut, R.R.4
  • 10
    • 0037781517 scopus 로고    scopus 로고
    • The puzzling lateral flexible stalk of the ribosome
    • P. Gonzalo, and J.P. Reboud The puzzling lateral flexible stalk of the ribosome Biol. Cell. 95 2003 179 193
    • (2003) Biol. Cell. , vol.95 , pp. 179-193
    • Gonzalo, P.1    Reboud, J.P.2
  • 12
    • 1542378898 scopus 로고    scopus 로고
    • Visualization of release factor 3 on the ribosome during termination of protein synthesis
    • B.P. Klaholz, A.G. Myasnikov, and M. Van Heel Visualization of release factor 3 on the ribosome during termination of protein synthesis Nature 427 2004 862 865
    • (2004) Nature , vol.427 , pp. 862-865
    • Klaholz, B.P.1    Myasnikov, A.G.2    Van Heel, M.3
  • 13
    • 1242339673 scopus 로고    scopus 로고
    • Interaction of helix D of elongation factor Tu with helices 4 and 5 of protein L7/12 on the ribosome
    • U. Kothe, H.J. Wieden, D. Mohr, and M.V. Rodnina Interaction of helix D of elongation factor Tu with helices 4 and 5 of protein L7/12 on the ribosome J. Mol. Biol. 336 2004 1011 1021
    • (2004) J. Mol. Biol. , vol.336 , pp. 1011-1021
    • Kothe, U.1    Wieden, H.J.2    Mohr, D.3    Rodnina, M.V.4
  • 14
    • 0023426152 scopus 로고
    • The structure and dynamics of ribosomal protein L12
    • A. Liljas, and A.T. Gudkov The structure and dynamics of ribosomal protein L12 Biochimie 69 1987 1043 1047
    • (1987) Biochimie , vol.69 , pp. 1043-1047
    • Liljas, A.1    Gudkov, A.T.2
  • 15
    • 0034601052 scopus 로고    scopus 로고
    • Arginines 29 and 59 of elongation factor G are important for GTP hydrolysis or translocation on the ribosome
    • D. Mohr, W. Wintermeyer, and M.V. Rodnina Arginines 29 and 59 of elongation factor G are important for GTP hydrolysis or translocation on the ribosome EMBO J. 19 2000 3458 3464
    • (2000) EMBO J. , vol.19 , pp. 3458-3464
    • Mohr, D.1    Wintermeyer, W.2    Rodnina, M.V.3
  • 16
    • 0037108102 scopus 로고    scopus 로고
    • GTPase activation of elongation factors Tu and G on the ribosome
    • D. Mohr, W. Wintermeyer, and M.V. Rodnina GTPase activation of elongation factors Tu and G on the ribosome Biochemistry 41 2002 12520 12528
    • (2002) Biochemistry , vol.41 , pp. 12520-12528
    • Mohr, D.1    Wintermeyer, W.2    Rodnina, M.V.3
  • 17
    • 0035958049 scopus 로고    scopus 로고
    • Cryo-electron microscopic localization of protein L7/L12 within the Escherichia coli 70 S ribosome by difference mapping and Nanogold labeling
    • L. Montesano-Roditis, D.G. Glitz, R.R. Traut, and P.L. Stewart Cryo-electron microscopic localization of protein L7/L12 within the Escherichia coli 70 S ribosome by difference mapping and Nanogold labeling J. Biol. Chem. 276 2001 14117 14123
    • (2001) J. Biol. Chem. , vol.276 , pp. 14117-14123
    • Montesano-Roditis, L.1    Glitz, D.G.2    Traut, R.R.3    Stewart, P.L.4
  • 19
    • 0027530457 scopus 로고
    • Structural and functional domains of Escherichia coli ribosomal protein L7/L12. the hinge region is required for activity
    • A.V. Oleinikov, B. Perroud, B. Wang, and R.R. Traut Structural and functional domains of Escherichia coli ribosomal protein L7/L12. The hinge region is required for activity J. Biol. Chem. 268 1993 917 922
    • (1993) J. Biol. Chem. , vol.268 , pp. 917-922
    • Oleinikov, A.V.1    Perroud, B.2    Wang, B.3    Traut, R.R.4
  • 20
    • 0032535207 scopus 로고    scopus 로고
    • Complete kinetic mechanism of elongation factor Tu-dependent binding of aminoacyl-tRNA to the a site of the E. coli ribosome
    • T. Pape, W. Wintermeyer, and M.V. Rodnina Complete kinetic mechanism of elongation factor Tu-dependent binding of aminoacyl-tRNA to the A site of the E. coli ribosome EMBO J. 17 1998 7490 7497
    • (1998) EMBO J. , vol.17 , pp. 7490-7497
    • Pape, T.1    Wintermeyer, W.2    Rodnina, M.V.3
  • 22
    • 0028941626 scopus 로고
    • GTP consumption of elongation factor Tu during translation of heteropolymeric mRNAs
    • M.V. Rodnina, and W. Wintermeyer GTP consumption of elongation factor Tu during translation of heteropolymeric mRNAs Proc. Natl. Acad. Sci. USA 92 1995 1945 1949
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 1945-1949
    • Rodnina, M.V.1    Wintermeyer, W.2
  • 23
    • 0030047916 scopus 로고    scopus 로고
    • Initial binding of the elongation factor Tu·GTP·aminoacyl- tRNA complex preceding codon recognition on the ribosome
    • M.V. Rodnina, T. Pape, R. Fricke, L. Kuhn, and W. Wintermeyer Initial binding of the elongation factor Tu·GTP·aminoacyl-tRNA complex preceding codon recognition on the ribosome J. Biol. Chem. 271 1996 646 652
    • (1996) J. Biol. Chem. , vol.271 , pp. 646-652
    • Rodnina, M.V.1    Pape, T.2    Fricke, R.3    Kuhn, L.4    Wintermeyer, W.5
  • 24
    • 0027732617 scopus 로고
    • Ribosomal proteins L11 and L10.(L12)4 and the antibiotic thiostrepton interact with overlapping regions of the 23 S rRNA backbone in the ribosomal GTPase centre
    • G. Rosendahl, and S. Douthwaite Ribosomal proteins L11 and L10.(L12)4 and the antibiotic thiostrepton interact with overlapping regions of the 23 S rRNA backbone in the ribosomal GTPase centre J. Mol. Biol. 234 1993 1013 1020
    • (1993) J. Mol. Biol. , vol.234 , pp. 1013-1020
    • Rosendahl, G.1    Douthwaite, S.2
  • 25
    • 0033966203 scopus 로고    scopus 로고
    • Stimulation of the GTPase activity of translation elongation factor G by ribosomal protein L7/12
    • A. Savelsbergh, D. Mohr, B. Wilden, W. Wintermeyer, and M.V. Rodnina Stimulation of the GTPase activity of translation elongation factor G by ribosomal protein L7/12 J. Biol. Chem. 275 2000 890 894
    • (2000) J. Biol. Chem. , vol.275 , pp. 890-894
    • Savelsbergh, A.1    Mohr, D.2    Wilden, B.3    Wintermeyer, W.4    Rodnina, M.V.5
  • 26
    • 0038433302 scopus 로고    scopus 로고
    • An elongation factor G-induced ribosome rearrangement precedes tRNA-mRNA translocation
    • A. Savelsbergh, V.I. Katunin, D. Mohr, F. Peske, M.V. Rodnina, and W. Wintermeyer An elongation factor G-induced ribosome rearrangement precedes tRNA-mRNA translocation Mol. Cell 11 2003 1517 1523
    • (2003) Mol. Cell , vol.11 , pp. 1517-1523
    • Savelsbergh, A.1    Katunin, V.I.2    Mohr, D.3    Peske, F.4    Rodnina, M.V.5    Wintermeyer, W.6
  • 27
    • 0034603196 scopus 로고    scopus 로고
    • Large-scale movement of elongation factor G and extensive conformational change of the ribosome during translocation
    • H. Stark, M.V. Rodnina, H.J. Wieden, M. van Heel, and W. Wintermeyer Large-scale movement of elongation factor G and extensive conformational change of the ribosome during translocation Cell 100 2000 301 309
    • (2000) Cell , vol.100 , pp. 301-309
    • Stark, H.1    Rodnina, M.V.2    Wieden, H.J.3    Van Heel, M.4    Wintermeyer, W.5
  • 28
  • 29
    • 0016787665 scopus 로고
    • Copies of proteins L7 and L12 and heterogeneity of the large subunit of Escherichia coli ribosome
    • A.R. Subramanian Copies of proteins L7 and L12 and heterogeneity of the large subunit of Escherichia coli ribosome J. Mol. Biol. 95 1975 1 8
    • (1975) J. Mol. Biol. , vol.95 , pp. 1-8
    • Subramanian, A.R.1
  • 31
    • 0033511228 scopus 로고    scopus 로고
    • Nucleoside triphosphate-binding proteins: Different scaffolds to achieve phosphoryl transfer
    • I.R. Vetter, and A. Wittinghofer Nucleoside triphosphate-binding proteins: different scaffolds to achieve phosphoryl transfer Q. Rev. Biophys. 32 1999 1 56
    • (1999) Q. Rev. Biophys. , vol.32 , pp. 1-56
    • Vetter, I.R.1    Wittinghofer, A.2
  • 33
    • 0035999791 scopus 로고    scopus 로고
    • Structure and function of the acidic ribosomal stalk proteins
    • M.C. Wahl, and W. Moller Structure and function of the acidic ribosomal stalk proteins Curr. Protein Pept. Sci. 3 2002 93 106
    • (2002) Curr. Protein Pept. Sci. , vol.3 , pp. 93-106
    • Wahl, M.C.1    Moller, W.2
  • 34
    • 0034677211 scopus 로고    scopus 로고
    • Flexibility, conformational diversity and two dimerization modes in complexes of ribosomal protein L12
    • M.C. Wahl, G.P. Bourenkov, H.D. Bartunik, and R. Huber Flexibility, conformational diversity and two dimerization modes in complexes of ribosomal protein L12 EMBO J. 19 2000 174 186
    • (2000) EMBO J. , vol.19 , pp. 174-186
    • Wahl, M.C.1    Bourenkov, G.P.2    Bartunik, H.D.3    Huber, R.4
  • 35
    • 0035089079 scopus 로고    scopus 로고
    • A common structural motif in elongation factor Ts and ribosomal protein L7/12 may be involved in the interaction with elongation factor Tu
    • H.-J. Wieden, W. Wintermeyer, and M.V. Rodnina A common structural motif in elongation factor Ts and ribosomal protein L7/12 may be involved in the interaction with elongation factor Tu J. Mol. Evol. 52 2001 129 136
    • (2001) J. Mol. Evol. , vol.52 , pp. 129-136
    • Wieden, H.-J.1    Wintermeyer, W.2    Rodnina, M.V.3
  • 36
    • 0033553439 scopus 로고    scopus 로고
    • A detailed view of a ribosomal active site: The structure of the L11-RNA complex
    • B.T. Wimberly, R. Guymon, J.P. McCutcheon, S.W. White, and V. Ramakrishnan A detailed view of a ribosomal active site: The structure of the L11-RNA complex Cell 97 1999 491 502
    • (1999) Cell , vol.97 , pp. 491-502
    • Wimberly, B.T.1    Guymon, R.2    McCutcheon, J.P.3    White, S.W.4    Ramakrishnan, V.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.