A curvature-based multiresolution automatic karyotyping system

Machine Vision and Applications

Volumn 14, Issue 3, 2003, Pages 145-156

  García, Cristina Urdiales ^a   Rubio, Antonio Bandera ^a   Pérez, Fabián Arrebola ^a   Hernández, Francisco Sandoval ^a  

^a Campus de Teatinos   (Spain)

Author keywords

Analysis of chromosomes; Chromosome classification; Curvature function; Karyotyping; Multiresolution images

Indexed keywords

ALGORITHMS; CAMERAS; CHROMOSOMES; CYTOLOGY; DATABASE SYSTEMS; IMAGE SEGMENTATION; MAXIMUM LIKELIHOOD ESTIMATION; VECTORS;

ANALYSIS OF CHROMOSOMES; CHROMOSOME CLASSIFICATION; CURVATURE FUNCTION; KARYOTYPING; MULTIRESOLUTION IMAGES;

GENETIC ENGINEERING;

EID: 21244454537     PISSN: 09328092     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00138-002-0076-z     Document Type: Article

References (31)

1. Agam G, Dmstein I (1997) Geometric separation of partially overlapping nonrigid objects applied to automatic chromosome classification. IEEE Trans PAMI 19(11): 1212-1222
2. Arrebola F, Bandera A, Camacho P, Sandoval F (1997) Corner detection by local histograms of contour chain code. Electr Lett 33:1769-1771
3. Arrebola F, Urdiales C, Camacho P, Sandoval F (1998) Vision system based on shifted fovea multiresolution retinopologies. Proceedings of IECON '98,3, Aachen, Germany, pp 1357-1361
4. Bandera C, Scott P (1989) Foveal machine vision systems. Proceedings of IEEE International Conference on Systems, Man and Cybernetics, pp 596-599
5. Bandera A, Urdiales C, Arrebola F, Sandoval F (1999) A twolevel robust approach to 2D object recognition by using local histograms of its contour. Patt Recogn Lett 20:49-55
6. Bandera A, Urdiales C. Arrebola F, Sandoval F (2000) Corner detection by means of an adaptively estimated curvature function. Electr Lett 36:124-126
7. Burt PJ, Hong TH, Rosenfeld A (1981) Segmentation and estimation of image region properties through cooperative hierarchical computation. IEEE Trans Syst Man Cybern 11:802-809
8. Carothers A, Piper J (1994) Computer-aided classification of human chromosomes: a review. Statistics Comput 4:161-171
9. Charters GC, Graham J (1999) Trainable grey-level models for disentangling overlapping chromosomes. Patt Recogn 32:1335-1349
10. Denisov DA, Dudkin AK (1994) Model-based chromosome recognition via hypotheses construction / verification. Patt Recogn Lett 15:299-307
11. Graham J,Piper J (1994) Automatic karyotype analysis. In: Gosden JR (ed) Methods in molecular biology, 29, Chromosomes analysis protocols. Humana Press, Totowa, NJ
12. Granum E (1982) Application of statistical and syntactical methods of analysis and classification to chromosome data. In: Kittler J, Fu KS, Pau LF (eds) Pattern recognition theory and applications (Proceedings NATO ASI Series). Reidel, Dordrecht, pp 373-398
13. Groen CA, Kate K, Smeulders AWM, Young T (1989) Human chromosome classification based on local band descriptors. Patt Recogn Lett 9:211-222
14. Hird JA, Wilson DF (1989) A comparison of targen detection and segmentation techniques. In: Lettington AH (ed) Optical systems for space and defense. SPIE 1191: 375-386
15. Ji L (1994) Fully automatic chromosome segmentation. Cytometry 17:196-208
16. Lerner B (1998) Toward a completely automatic neural network based human chromosome analysis. IEEE Trans Syst Man Cybern 28:544-552
17. Lundsleen C, Piper J (1989) Automation of cytogenetics. Springer, Berlin Heidelberg New York
18. Nickolls P, Piper J, Rutovitz D, Chisholm A, Johnstone I, Robertson M (1981) Pre-processing of images in an automated chromosome analysis system. Patt Recogn 14:219-229
19. Piper J, Granum E, Rutowitz D, Ruttledge H (1980) Automation of chromosomes analysis. Signal Process 2:203-221
20. Piper J (1986) Classification of chromosomes constrained by expected class size. Patt Recogn Lett 4:391-395
21. Piper J (1987) The effect of zero feature correlation assumption on maximum likelihood based classification of chromosomes. Signal Process 12:49-57
22. Piper J, Granum E (1989) On fully automatic feature measurements for banded chromosome classification. Cytometry 10:242-255
23. Piper J (1992) Variability and bias in experimentally measured classifier error rates. Patt Recogn Lett 13:685-692
24. Popescu M, Gader PD, Keller JM, Klein C, Stanley J, Caldwell C (1999) Automatic karyotyping of metaphase cells with overlapping chromosomes. Comput Biol Med 29:61-82
25. Ritter G. Gallegos MT, Gaggermeier K (1995) Automatic context-sensitive karyotyping of human chromosomes based on elliptically symmetric statistical distributions. Patt Recogn 28:823-831
26. Ritter G, Gallegos MT (1997) Outliers in statistical pattern recognition and an application to automatic chromosome classification. Patt Recogn Lett 18:525-539
27. Ritter G, Gaggermeier K Automatic classification of chromosomes by means of quadratically asymmetric statistical distributions. Patt Recogn 32:997-1008
28. Ritter G, Schreib G (2001) Using dominant points and variants for profile extraction from chromosomes. Patt Recogn 34:923-938
29. Ritter G, Pesch Ch (2001) Polarity-free automatic classification of chromosomes. Computat Statistics Data Anal 35:351-372
30. Urdiales C, Bandera A, Sandoval F (2001) Non parametric planar shape representation based on adaptive curvature functions. Patt Recogn
31. Van Vliet LJ, Young IT, Mayall BH (1990) The ATHENA semiautomated karyotyping system. Cytometry 11:51-58